RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 RBM46Q8TBY0 533 aaKnown RBP18.63■□□□□ 0.57
CLDN11-208ENST00000488989 C12orf42Q96LP6 360 aa18.63■□□□□ 0.57
CLDN11-208ENST00000488989 ZNF408Q9H9D4 720 aa18.63■□□□□ 0.57
CLDN11-208ENST00000488989 ZHX2Q9Y6X8 837 aa18.63■□□□□ 0.57
CLDN11-208ENST00000488989 C19orf81C9J6K1 198 aa18.62■□□□□ 0.57
CLDN11-208ENST00000488989 UBE2Q2LH0YL09 131 aa18.62■□□□□ 0.57
CLDN11-208ENST00000488989 YY1P25490 414 aa18.62■□□□□ 0.57
CLDN11-208ENST00000488989 GJB2P29033 226 aa18.62■□□□□ 0.57
CLDN11-208ENST00000488989 USP14P54578 494 aa18.62■□□□□ 0.57
CLDN11-208ENST00000488989 BACE1P56817 501 aa18.62■□□□□ 0.57
CLDN11-208ENST00000488989 SPP2Q13103 211 aa18.62■□□□□ 0.57
CLDN11-208ENST00000488989 SH3D19Q5HYK7 790 aa18.62■□□□□ 0.57
CLDN11-208ENST00000488989 C2orf69Q8N8R5 385 aa18.62■□□□□ 0.57
CLDN11-208ENST00000488989 SPRYD3Q8NCJ5 442 aa18.62■□□□□ 0.57
CLDN11-208ENST00000488989 LPAR1Q92633 364 aa18.62■□□□□ 0.57
CLDN11-208ENST00000488989 CLMNQ96JQ2 1002 aa18.62■□□□□ 0.57
CLDN11-208ENST00000488989 SPZ1Q9BXG8 430 aa18.62■□□□□ 0.57
CLDN11-208ENST00000488989 RNF26Q9BY78 433 aaPredicted RBP18.62■□□□□ 0.57
CLDN11-208ENST00000488989 FOXD4L1Q9NU39 408 aa18.62■□□□□ 0.57
CLDN11-208ENST00000488989 CNTNAP5Q8WYK1 1306 aa18.62■□□□□ 0.57
CLDN11-208ENST00000488989 KLRF2D3W0D1 207 aa18.61■□□□□ 0.57
CLDN11-208ENST00000488989 PLA2G6O60733 806 aa18.61■□□□□ 0.57
CLDN11-208ENST00000488989 TOMM70O94826 608 aa18.61■□□□□ 0.57
CLDN11-208ENST00000488989 FMNL1O95466 1100 aaPredicted RBP18.61■□□□□ 0.57
CLDN11-208ENST00000488989 BMP3P12645 472 aa18.61■□□□□ 0.57
CLDN11-208ENST00000488989 FDPSP14324 419 aaKnown RBP18.61■□□□□ 0.57
CLDN11-208ENST00000488989 SLC1A4P43007 532 aa18.61■□□□□ 0.57
CLDN11-208ENST00000488989 SLC35G1Q2M3R5 365 aa18.61■□□□□ 0.57
CLDN11-208ENST00000488989 BTNL9Q6UXG8 535 aa18.61■□□□□ 0.57
CLDN11-208ENST00000488989 FEZ1Q99689 392 aa18.61■□□□□ 0.57
CLDN11-208ENST00000488989 ELP3Q9H9T3 547 aa18.61■□□□□ 0.57
CLDN11-208ENST00000488989 MTMR7Q9Y216 660 aa18.61■□□□□ 0.57
CLDN11-208ENST00000488989 RLFQ13129 1914 aa18.61■□□□□ 0.57
CLDN11-208ENST00000488989 CXCL11O14625 94 aa18.6■□□□□ 0.57
CLDN11-208ENST00000488989 PRPF3O43395 683 aaKnown RBP18.6■□□□□ 0.57
CLDN11-208ENST00000488989 CYTH3O43739 400 aa18.6■□□□□ 0.57
CLDN11-208ENST00000488989 GOLGA8HP0CJ92 632 aa18.6■□□□□ 0.57
CLDN11-208ENST00000488989 SSRP1Q08945 709 aaKnown RBP18.6■□□□□ 0.57
CLDN11-208ENST00000488989 PPIL2Q13356 520 aa18.6■□□□□ 0.57
CLDN11-208ENST00000488989 MTMR2Q13614 643 aa18.6■□□□□ 0.57
CLDN11-208ENST00000488989 ZNF784Q8NCA9 323 aaPredicted RBP18.6■□□□□ 0.57
CLDN11-208ENST00000488989 PHKBQ93100 1093 aa18.6■□□□□ 0.57
CLDN11-208ENST00000488989 RIOX1Q9H6W3 641 aa18.6■□□□□ 0.57
CLDN11-208ENST00000488989 EMILIN3Q9NT22 766 aa18.6■□□□□ 0.57
CLDN11-208ENST00000488989 ORC3Q9UBD5 711 aaPredicted RBP18.6■□□□□ 0.57
CLDN11-208ENST00000488989 KCNH4Q9UQ05 1017 aa18.6■□□□□ 0.57
CLDN11-208ENST00000488989 FRMPD2Q68DX3 1309 aaPredicted RBP18.59■□□□□ 0.57
CLDN11-208ENST00000488989 WDR46O15213 610 aaKnown RBP18.59■□□□□ 0.57
CLDN11-208ENST00000488989 CCDC96Q2M329 555 aa18.59■□□□□ 0.57
CLDN11-208ENST00000488989 TRIM22Q8IYM9 498 aa18.59■□□□□ 0.57
CLDN11-208ENST00000488989 CMTR1Q8N1G2 835 aaKnown RBP18.59■□□□□ 0.57
CLDN11-208ENST00000488989 RGS22Q8NE09 1264 aa18.59■□□□□ 0.57
CLDN11-208ENST00000488989 CNKSR2Q8WXI2 1034 aa18.59■□□□□ 0.57
CLDN11-208ENST00000488989 RBM27Q9P2N5 1060 aaKnown RBP18.59■□□□□ 0.57
CLDN11-208ENST00000488989 CIZ1Q9ULV3 898 aaPredicted RBP18.59■□□□□ 0.57
CLDN11-208ENST00000488989 DTNBO60941 627 aa18.58■□□□□ 0.56
CLDN11-208ENST00000488989 DEXIO95424 95 aa18.58■□□□□ 0.56
CLDN11-208ENST00000488989 FSTL1Q12841 308 aa18.58■□□□□ 0.56
CLDN11-208ENST00000488989 ZYXQ15942 572 aaKnown RBP18.58■□□□□ 0.56
CLDN11-208ENST00000488989 TTBK2Q6IQ55 1244 aa18.58■□□□□ 0.56
CLDN11-208ENST00000488989 KCTD1Q719H9 257 aa18.58■□□□□ 0.56
CLDN11-208ENST00000488989 MTMR8Q96EF0 704 aa18.58■□□□□ 0.56
CLDN11-208ENST00000488989 SLC10A4Q96EP9 437 aa18.58■□□□□ 0.56
CLDN11-208ENST00000488989 DDX11Q96FC9 970 aa18.58■□□□□ 0.56
CLDN11-208ENST00000488989 SLC26A6Q9BXS9 759 aa18.58■□□□□ 0.56
CLDN11-208ENST00000488989 GPCPD1Q9NPB8 672 aa18.58■□□□□ 0.56
CLDN11-208ENST00000488989 KIF3AQ9Y496 699 aa18.58■□□□□ 0.56
CLDN11-208ENST00000488989 A0A0G2JLL6 359 aaPredicted RBP18.57■□□□□ 0.56
CLDN11-208ENST00000488989 TRIM75PA6NK02 468 aa18.57■□□□□ 0.56
CLDN11-208ENST00000488989 IRF6O14896 467 aa18.57■□□□□ 0.56
CLDN11-208ENST00000488989 PDIA4P13667 645 aaKnown RBP18.57■□□□□ 0.56
CLDN11-208ENST00000488989 PKN1Q16512 942 aa18.57■□□□□ 0.56
CLDN11-208ENST00000488989 FAM83BQ5T0W9 1011 aa18.57■□□□□ 0.56
CLDN11-208ENST00000488989 PRRT2Q7Z6L0 340 aaPredicted RBP18.57■□□□□ 0.56
CLDN11-208ENST00000488989 SPICE1Q8N0Z3 855 aa18.57■□□□□ 0.56
CLDN11-208ENST00000488989 CCDC82Q8N4S0 544 aa18.57■□□□□ 0.56
CLDN11-208ENST00000488989 OPTNQ96CV9 577 aa18.57■□□□□ 0.56
CLDN11-208ENST00000488989 NUP88Q99567 741 aaPredicted RBP18.57■□□□□ 0.56
CLDN11-208ENST00000488989 UBA5Q9GZZ9 404 aa18.57■□□□□ 0.56
CLDN11-208ENST00000488989 RAD21O60216 631 aa18.56■□□□□ 0.56
CLDN11-208ENST00000488989 VCAM1P19320 739 aa18.56■□□□□ 0.56
CLDN11-208ENST00000488989 PDCP20941 246 aa18.56■□□□□ 0.56
CLDN11-208ENST00000488989 GJA5P36382 358 aa18.56■□□□□ 0.56
CLDN11-208ENST00000488989 FAM160B2Q86V87 743 aa18.56■□□□□ 0.56
CLDN11-208ENST00000488989 FAM184AQ8NB25 1140 aa18.56■□□□□ 0.56
CLDN11-208ENST00000488989 WASF1Q92558 559 aa18.56■□□□□ 0.56
CLDN11-208ENST00000488989 OTUD5Q96G74 571 aa18.56■□□□□ 0.56
CLDN11-208ENST00000488989 CPVLQ9H3G5 476 aa18.56■□□□□ 0.56
CLDN11-208ENST00000488989 FEM1BQ9UK73 627 aa18.56■□□□□ 0.56
CLDN11-208ENST00000488989 V9GY48 417 aaPredicted RBP18.56■□□□□ 0.56
CLDN11-208ENST00000488989 TMEM232C9JQI7 657 aa18.55■□□□□ 0.56
CLDN11-208ENST00000488989 STAT2P52630 851 aa18.55■□□□□ 0.56
CLDN11-208ENST00000488989 HMGCS2P54868 508 aa18.55■□□□□ 0.56
CLDN11-208ENST00000488989 AKAP17AQ02040 695 aaKnown RBP18.55■□□□□ 0.56
CLDN11-208ENST00000488989 SYDE2Q5VT97 1194 aa18.55■□□□□ 0.56
CLDN11-208ENST00000488989 ADGRF4Q8IZF3 695 aa18.55■□□□□ 0.56
CLDN11-208ENST00000488989 PROCA1Q8NCQ7 364 aaPredicted RBP18.55■□□□□ 0.56
CLDN11-208ENST00000488989 CHURC1Q8WUH1 139 aa18.55■□□□□ 0.56
CLDN11-208ENST00000488989 WNK4Q96J92 1243 aa18.55■□□□□ 0.56
CLDN11-208ENST00000488989 JMJD4Q9H9V9 463 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms