RNA–Protein interactions for RNA: ENST00000488961.5

BEST3-205, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-205ENST00000488961 TEX33O43247 280 aa8.65□□□□□ -1.02
BEST3-205ENST00000488961 SASH3O75995 380 aa8.65□□□□□ -1.02
BEST3-205ENST00000488961 CDKL5O76039 1030 aa8.65□□□□□ -1.02
BEST3-205ENST00000488961 ZRANB2O95218 330 aaKnown RBP eCLIP8.65□□□□□ -1.02
BEST3-205ENST00000488961 ACTN2P35609 894 aa8.65□□□□□ -1.02
BEST3-205ENST00000488961 PKN1Q16512 942 aa8.65□□□□□ -1.02
BEST3-205ENST00000488961 BRAPQ7Z569 592 aa8.65□□□□□ -1.02
BEST3-205ENST00000488961 KRI1Q8N9T8 703 aaKnown RBP8.65□□□□□ -1.02
BEST3-205ENST00000488961 RASSF8Q8NHQ8 419 aa8.65□□□□□ -1.02
BEST3-205ENST00000488961 PPM1EQ8WY54 764 aa8.65□□□□□ -1.02
BEST3-205ENST00000488961 ESR2Q92731 530 aa8.65□□□□□ -1.02
BEST3-205ENST00000488961 AK7Q96M32 723 aa8.65□□□□□ -1.02
BEST3-205ENST00000488961 MED15Q96RN5 788 aa8.65□□□□□ -1.02
BEST3-205ENST00000488961 KRT23Q9C075 422 aa8.65□□□□□ -1.02
BEST3-205ENST00000488961 UBA5Q9GZZ9 404 aa8.65□□□□□ -1.02
BEST3-205ENST00000488961 DCP1AQ9NPI6 582 aaPredicted RBP8.65□□□□□ -1.02
BEST3-205ENST00000488961 TFR2Q9UP52 801 aa8.65□□□□□ -1.02
BEST3-205ENST00000488961 ZNF652Q9Y2D9 606 aa8.65□□□□□ -1.02
BEST3-205ENST00000488961 ANKRD36CQ5JPF3 1778 aa8.65□□□□□ -1.02
BEST3-205ENST00000488961 DDX60Q8IY21 1712 aaKnown RBP8.65□□□□□ -1.02
BEST3-205ENST00000488961 YEATS4O95619 227 aa8.65□□□□□ -1.03
BEST3-205ENST00000488961 CD44P16070 742 aaKnown RBP8.65□□□□□ -1.03
BEST3-205ENST00000488961 SCNN1DP51172 638 aa8.65□□□□□ -1.03
BEST3-205ENST00000488961 NLRP12P59046 1061 aa8.65□□□□□ -1.03
BEST3-205ENST00000488961 NLRP5P59047 1200 aa8.65□□□□□ -1.03
BEST3-205ENST00000488961 TYW1BQ6NUM6 668 aa8.65□□□□□ -1.03
BEST3-205ENST00000488961 STAG1Q8WVM7 1258 aa8.65□□□□□ -1.03
BEST3-205ENST00000488961 SYMPKQ92797 1274 aaKnown RBP8.65□□□□□ -1.03
BEST3-205ENST00000488961 HPS3Q969F9 1004 aa8.65□□□□□ -1.03
BEST3-205ENST00000488961 PLEKHA4Q9H4M7 779 aa8.65□□□□□ -1.03
BEST3-205ENST00000488961 ZNF804BA4D1E1 1349 aa8.65□□□□□ -1.03
BEST3-205ENST00000488961 C6orf229H3BNL8 230 aa8.64□□□□□ -1.03
BEST3-205ENST00000488961 IFNAR1P17181 557 aa8.64□□□□□ -1.03
BEST3-205ENST00000488961 MNAT1P51948 309 aa8.64□□□□□ -1.03
BEST3-205ENST00000488961 INHBEP58166 350 aa8.64□□□□□ -1.03
BEST3-205ENST00000488961 PTGDRQ13258 359 aa8.64□□□□□ -1.03
BEST3-205ENST00000488961 SMC1AQ14683 1233 aaKnown RBP8.64□□□□□ -1.03
BEST3-205ENST00000488961 PARP10Q53GL7 1025 aa8.64□□□□□ -1.03
BEST3-205ENST00000488961 NAIF1Q69YI7 327 aaPredicted RBP8.64□□□□□ -1.03
BEST3-205ENST00000488961 CATIPQ7Z7H3 387 aa8.64□□□□□ -1.03
BEST3-205ENST00000488961 HINFPQ9BQA5 517 aa8.64□□□□□ -1.03
BEST3-205ENST00000488961 MKNK2Q9HBH9 465 aa8.64□□□□□ -1.03
BEST3-205ENST00000488961 POLD4Q9HCU8 107 aa8.64□□□□□ -1.03
BEST3-205ENST00000488961 KCNQ5Q9NR82 932 aa8.64□□□□□ -1.03
BEST3-205ENST00000488961 GNL3LQ9NVN8 582 aaKnown RBP8.64□□□□□ -1.03
BEST3-205ENST00000488961 MAN1B1Q9UKM7 699 aa8.64□□□□□ -1.03
BEST3-205ENST00000488961 RTCBQ9Y3I0 505 aaKnown RBP8.64□□□□□ -1.03
BEST3-205ENST00000488961 NFE2L3Q9Y4A8 694 aa8.64□□□□□ -1.03
BEST3-205ENST00000488961 FRMPD2Q68DX3 1309 aaPredicted RBP8.64□□□□□ -1.03
BEST3-205ENST00000488961 FAM205AQ6ZU69 1335 aa8.64□□□□□ -1.03
BEST3-205ENST00000488961 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.64□□□□□ -1.03
BEST3-205ENST00000488961 MPHOSPH10O00566 681 aaKnown RBP8.64□□□□□ -1.03
BEST3-205ENST00000488961 DPYDQ12882 1025 aa8.64□□□□□ -1.03
BEST3-205ENST00000488961 SEC23AQ15436 765 aa8.64□□□□□ -1.03
BEST3-205ENST00000488961 DOK7Q18PE1 504 aa8.64□□□□□ -1.03
BEST3-205ENST00000488961 RESP18Q5W5W9 173 aa8.64□□□□□ -1.03
BEST3-205ENST00000488961 HEATR3Q7Z4Q2 680 aa8.64□□□□□ -1.03
BEST3-205ENST00000488961 CCAR2Q8N163 923 aaKnown RBP8.64□□□□□ -1.03
BEST3-205ENST00000488961 CEP89Q96ST8 783 aa8.64□□□□□ -1.03
BEST3-205ENST00000488961 NAT10Q9H0A0 1025 aaKnown RBP8.64□□□□□ -1.03
BEST3-205ENST00000488961 INTS13Q9NVM9 706 aa8.64□□□□□ -1.03
BEST3-205ENST00000488961 FBXO2Q9UK22 296 aaPredicted RBP8.64□□□□□ -1.03
BEST3-205ENST00000488961 ADAM21Q9UKJ8 722 aa8.64□□□□□ -1.03
BEST3-205ENST00000488961 ECM2O94769 699 aaPredicted RBP8.63□□□□□ -1.03
BEST3-205ENST00000488961 TRIM37O94972 964 aa8.63□□□□□ -1.03
BEST3-205ENST00000488961 E4F1Q66K89 784 aaPredicted RBP8.63□□□□□ -1.03
BEST3-205ENST00000488961 USP17L2Q6R6M4 530 aa8.63□□□□□ -1.03
BEST3-205ENST00000488961 LEKR1Q6ZMV7 388 aa8.63□□□□□ -1.03
BEST3-205ENST00000488961 SGMS1Q86VZ5 419 aa8.63□□□□□ -1.03
BEST3-205ENST00000488961 FBXO41Q8TF61 875 aa8.63□□□□□ -1.03
BEST3-205ENST00000488961 BSDC1Q9NW68 430 aaPredicted RBP8.63□□□□□ -1.03
BEST3-205ENST00000488961 NHSL1Q5SYE7 1610 aa8.63□□□□□ -1.03
BEST3-205ENST00000488961 MYH8P13535 1937 aa8.63□□□□□ -1.03
BEST3-205ENST00000488961 CCDC196A0A1B0GTZ2 297 aa8.63□□□□□ -1.03
BEST3-205ENST00000488961 FANCGO15287 622 aa8.63□□□□□ -1.03
BEST3-205ENST00000488961 CTAGE5O15320 804 aa8.63□□□□□ -1.03
BEST3-205ENST00000488961 UFL1O94874 794 aa8.63□□□□□ -1.03
BEST3-205ENST00000488961 ABL1P00519 1130 aa8.63□□□□□ -1.03
BEST3-205ENST00000488961 SFPQP23246 707 aaKnown RBP eCLIP8.63□□□□□ -1.03
BEST3-205ENST00000488961 LIFRP42702 1097 aa8.63□□□□□ -1.03
BEST3-205ENST00000488961 RBM5P52756 815 aaKnown RBP eCLIP8.63□□□□□ -1.03
BEST3-205ENST00000488961 SNAP25P60880 206 aa8.63□□□□□ -1.03
BEST3-205ENST00000488961 POSTNQ15063 836 aa8.63□□□□□ -1.03
BEST3-205ENST00000488961 NYAP1Q6ZVC0 841 aa8.63□□□□□ -1.03
BEST3-205ENST00000488961 IQCA1Q86XH1 822 aa8.63□□□□□ -1.03
BEST3-205ENST00000488961 IL17RBQ9NRM6 502 aa8.63□□□□□ -1.03
BEST3-205ENST00000488961 DNAI1Q9UI46 699 aa8.63□□□□□ -1.03
BEST3-205ENST00000488961 A0A1W2PQ27 194 aa8.63□□□□□ -1.03
BEST3-205ENST00000488961 A0A1W2PQ64 194 aa8.63□□□□□ -1.03
BEST3-205ENST00000488961 A0A1W2PQD8 194 aa8.63□□□□□ -1.03
BEST3-205ENST00000488961 TRIM49BA6NDI0 452 aa8.63□□□□□ -1.03
BEST3-205ENST00000488961 H0YHG0 523 aa8.63□□□□□ -1.03
BEST3-205ENST00000488961 NKRFO15226 690 aaKnown RBP eCLIP8.63□□□□□ -1.03
BEST3-205ENST00000488961 DEXIO95424 95 aa8.63□□□□□ -1.03
BEST3-205ENST00000488961 CORO7P57737 925 aa8.63□□□□□ -1.03
BEST3-205ENST00000488961 SARNPP82979 210 aaKnown RBP8.63□□□□□ -1.03
BEST3-205ENST00000488961 TROAPQ12815 778 aa8.63□□□□□ -1.03
BEST3-205ENST00000488961 IL17AQ16552 155 aa8.63□□□□□ -1.03
BEST3-205ENST00000488961 INF2Q27J81 1249 aa8.63□□□□□ -1.03
BEST3-205ENST00000488961 MICALL1Q8N3F8 863 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms