RNA–Protein interactions for RNA: ENST00000487997.1

PTBP3-208, Transcript of polypyrimidine tract binding protein 3, humanhuman

TSL 3

Gene PTBP3, Length 389 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-208ENST00000487997 SH3D19Q5HYK7 790 aa11.31□□□□□ -0.6
PTBP3-208ENST00000487997 VPS53Q5VIR6 699 aa11.31□□□□□ -0.6
PTBP3-208ENST00000487997 GPAT2Q6NUI2 795 aa11.31□□□□□ -0.6
PTBP3-208ENST00000487997 ZNF589Q86UQ0 364 aaPredicted RBP11.31□□□□□ -0.6
PTBP3-208ENST00000487997 SMCR8Q8TEV9 937 aaPredicted RBP11.31□□□□□ -0.6
PTBP3-208ENST00000487997 ZNF296Q8WUU4 475 aaPredicted RBP11.31□□□□□ -0.6
PTBP3-208ENST00000487997 ERO1AQ96HE7 468 aa11.31□□□□□ -0.6
PTBP3-208ENST00000487997 ARIH1Q9Y4X5 557 aaPredicted RBP11.31□□□□□ -0.6
PTBP3-208ENST00000487997 SMIM22K7EJ46 135 aa11.3□□□□□ -0.6
PTBP3-208ENST00000487997 FGAP02671 866 aa11.3□□□□□ -0.6
PTBP3-208ENST00000487997 TSPY3P0CV98 308 aa11.3□□□□□ -0.6
PTBP3-208ENST00000487997 TSPY8P0CW00 308 aa11.3□□□□□ -0.6
PTBP3-208ENST00000487997 IRX3P78415 501 aaPredicted RBP11.3□□□□□ -0.6
PTBP3-208ENST00000487997 ICA1Q05084 483 aa11.3□□□□□ -0.6
PTBP3-208ENST00000487997 TNS4Q8IZW8 715 aa11.3□□□□□ -0.6
PTBP3-208ENST00000487997 KIAA1683Q9H0B3 1180 aa11.3□□□□□ -0.6
PTBP3-208ENST00000487997 R3HDMLQ9H3Y0 253 aa11.3□□□□□ -0.6
PTBP3-208ENST00000487997 KANSL2Q9H9L4 492 aa11.3□□□□□ -0.6
PTBP3-208ENST00000487997 TOMM22Q9NS69 142 aa11.3□□□□□ -0.6
PTBP3-208ENST00000487997 ZMYM6O95789 1325 aa11.3□□□□□ -0.6
PTBP3-208ENST00000487997 RAD50Q92878 1312 aa11.3□□□□□ -0.6
PTBP3-208ENST00000487997 SPDYE16A6NNV3 312 aaPredicted RBP11.29□□□□□ -0.6
PTBP3-208ENST00000487997 ZNF213O14771 459 aa11.29□□□□□ -0.6
PTBP3-208ENST00000487997 PRDM1O75626 825 aa11.29□□□□□ -0.6
PTBP3-208ENST00000487997 CYP2C8P10632 490 aa11.29□□□□□ -0.6
PTBP3-208ENST00000487997 RASA1P20936 1047 aa11.29□□□□□ -0.6
PTBP3-208ENST00000487997 CHMLP26374 656 aa11.29□□□□□ -0.6
PTBP3-208ENST00000487997 GUCY1A2P33402 732 aa11.29□□□□□ -0.6
PTBP3-208ENST00000487997 CTDSPL2Q05D32 466 aa11.29□□□□□ -0.6
PTBP3-208ENST00000487997 DGKZQ13574 1117 aa11.29□□□□□ -0.6
PTBP3-208ENST00000487997 TREML2Q5T2D2 321 aa11.29□□□□□ -0.6
PTBP3-208ENST00000487997 CASC1Q6TDU7 716 aa11.29□□□□□ -0.6
PTBP3-208ENST00000487997 ACER1Q8TDN7 264 aa11.29□□□□□ -0.6
PTBP3-208ENST00000487997 DSCC1Q9BVC3 393 aa11.29□□□□□ -0.6
PTBP3-208ENST00000487997 CTNNA3Q9UI47 895 aa11.29□□□□□ -0.6
PTBP3-208ENST00000487997 ANAPC4Q9UJX5 808 aa11.29□□□□□ -0.6
PTBP3-208ENST00000487997 PARP14Q460N5 1801 aa11.28□□□□□ -0.6
PTBP3-208ENST00000487997 TSPY2A6NKD2 308 aa11.28□□□□□ -0.6
PTBP3-208ENST00000487997 FOXP2O15409 715 aa11.28□□□□□ -0.6
PTBP3-208ENST00000487997 RAD21O60216 631 aa11.28□□□□□ -0.6
PTBP3-208ENST00000487997 RANBP6O60518 1105 aaKnown RBP11.28□□□□□ -0.6
PTBP3-208ENST00000487997 GCLCP48506 637 aaPredicted RBP11.28□□□□□ -0.6
PTBP3-208ENST00000487997 TFAP4Q01664 338 aa11.28□□□□□ -0.6
PTBP3-208ENST00000487997 NBR1Q14596 966 aa11.28□□□□□ -0.6
PTBP3-208ENST00000487997 IMMTQ16891 758 aaKnown RBP11.28□□□□□ -0.6
PTBP3-208ENST00000487997 BMP2KLQ5H9B9 411 aa11.28□□□□□ -0.6
PTBP3-208ENST00000487997 RRP12Q5JTH9 1297 aaKnown RBP11.28□□□□□ -0.6
PTBP3-208ENST00000487997 MFSD6Q6ZSS7 791 aa11.28□□□□□ -0.6
PTBP3-208ENST00000487997 KIAA1211Q6ZU35 1233 aa11.28□□□□□ -0.6
PTBP3-208ENST00000487997 CTU1Q7Z7A3 348 aaKnown RBP11.28□□□□□ -0.6
PTBP3-208ENST00000487997 RNF41Q9H4P4 317 aaPredicted RBP11.28□□□□□ -0.6
PTBP3-208ENST00000487997 GOPCQ9HD26 462 aa11.28□□□□□ -0.6
PTBP3-208ENST00000487997 CPA4Q9UI42 421 aa11.28□□□□□ -0.6
PTBP3-208ENST00000487997 RABGEF1Q9UJ41 708 aa11.28□□□□□ -0.6
PTBP3-208ENST00000487997 DOCK3Q8IZD9 2030 aa11.28□□□□□ -0.6
PTBP3-208ENST00000487997 COL11A1P12107 1806 aaPredicted RBP11.28□□□□□ -0.6
PTBP3-208ENST00000487997 USP17L15C9J2P7 530 aa11.27□□□□□ -0.61
PTBP3-208ENST00000487997 USP17L13C9JLJ4 530 aa11.27□□□□□ -0.61
PTBP3-208ENST00000487997 USP17L11C9JVI0 530 aa11.27□□□□□ -0.61
PTBP3-208ENST00000487997 USP17L18D6R9N7 530 aa11.27□□□□□ -0.61
PTBP3-208ENST00000487997 USP17L22D6RA61 530 aa11.27□□□□□ -0.61
PTBP3-208ENST00000487997 USP17L17D6RBQ6 530 aa11.27□□□□□ -0.61
PTBP3-208ENST00000487997 USP17L19D6RCP7 530 aa11.27□□□□□ -0.61
PTBP3-208ENST00000487997 USP17L20D6RJB6 530 aa11.27□□□□□ -0.61
PTBP3-208ENST00000487997 PCP11498 1178 aaKnown RBP11.27□□□□□ -0.61
PTBP3-208ENST00000487997 EEF2P13639 858 aaKnown RBP11.27□□□□□ -0.61
PTBP3-208ENST00000487997 HOXA7P31268 230 aaPredicted RBP11.27□□□□□ -0.61
PTBP3-208ENST00000487997 HAND2P61296 217 aa11.27□□□□□ -0.61
PTBP3-208ENST00000487997 USP17L24Q0WX57 530 aa11.27□□□□□ -0.61
PTBP3-208ENST00000487997 PKN2Q16513 984 aaKnown RBP11.27□□□□□ -0.61
PTBP3-208ENST00000487997 C17orf99Q6UX52 265 aa11.27□□□□□ -0.61
PTBP3-208ENST00000487997 SKAP1Q86WV1 359 aa11.27□□□□□ -0.61
PTBP3-208ENST00000487997 CD99L2Q8TCZ2 262 aa11.27□□□□□ -0.61
PTBP3-208ENST00000487997 LPAR1Q92633 364 aa11.27□□□□□ -0.61
PTBP3-208ENST00000487997 C12orf42Q96LP6 360 aa11.27□□□□□ -0.61
PTBP3-208ENST00000487997 NBPF3Q9H094 633 aa11.27□□□□□ -0.61
PTBP3-208ENST00000487997 ASCC2Q9H1I8 757 aaPredicted RBP11.27□□□□□ -0.61
PTBP3-208ENST00000487997 TMX2Q9Y320 296 aa11.27□□□□□ -0.61
PTBP3-208ENST00000487997 ZSWIM8A7E2V4 1837 aa11.27□□□□□ -0.61
PTBP3-208ENST00000487997 A0A1W2PRG0 241 aa11.26□□□□□ -0.61
PTBP3-208ENST00000487997 TTLL1O95922 423 aa11.26□□□□□ -0.61
PTBP3-208ENST00000487997 VCAM1P19320 739 aa11.26□□□□□ -0.61
PTBP3-208ENST00000487997 PTPN5P54829 565 aa11.26□□□□□ -0.61
PTBP3-208ENST00000487997 LACTBP83111 547 aaPredicted RBP11.26□□□□□ -0.61
PTBP3-208ENST00000487997 FAM47AQ5JRC9 791 aa11.26□□□□□ -0.61
PTBP3-208ENST00000487997 AKNAD1Q5T1N1 836 aa11.26□□□□□ -0.61
PTBP3-208ENST00000487997 THSD4Q6ZMP0 1018 aa11.26□□□□□ -0.61
PTBP3-208ENST00000487997 CLEC10AQ8IUN9 316 aa11.26□□□□□ -0.61
PTBP3-208ENST00000487997 NEDD1Q8NHV4 660 aa11.26□□□□□ -0.61
PTBP3-208ENST00000487997 GTF3C2Q8WUA4 911 aaPredicted RBP11.26□□□□□ -0.61
PTBP3-208ENST00000487997 TANGO6Q9C0B7 1094 aa11.26□□□□□ -0.61
PTBP3-208ENST00000487997 RPAP3Q9H6T3 665 aaPredicted RBP11.26□□□□□ -0.61
PTBP3-208ENST00000487997 VCPKMTQ9H867 229 aa11.26□□□□□ -0.61
PTBP3-208ENST00000487997 EFCC1Q9HA90 598 aa11.26□□□□□ -0.61
PTBP3-208ENST00000487997 PLA2G2EQ9NZK7 142 aa11.26□□□□□ -0.61
PTBP3-208ENST00000487997 NYAP2Q9P242 653 aa11.26□□□□□ -0.61
PTBP3-208ENST00000487997 CLIP2Q9UDT6 1046 aa11.26□□□□□ -0.61
PTBP3-208ENST00000487997 TRIM17Q9Y577 477 aa11.26□□□□□ -0.61
PTBP3-208ENST00000487997 ZNFX1Q9P2E3 1918 aaKnown RBP11.25□□□□□ -0.61
PTBP3-208ENST00000487997 SGSM2O43147 1006 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms