RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 AOC2O75106 756 aa4.51□□□□□ -1.69
GPNMB-212ENST00000487890 UBOX5O94941 541 aa4.51□□□□□ -1.69
GPNMB-212ENST00000487890 TP53P04637 393 aaPredicted RBP4.51□□□□□ -1.69
GPNMB-212ENST00000487890 SDSP20132 328 aa4.51□□□□□ -1.69
GPNMB-212ENST00000487890 CCNFP41002 786 aa4.51□□□□□ -1.69
GPNMB-212ENST00000487890 MAP2K3P46734 347 aa4.51□□□□□ -1.69
GPNMB-212ENST00000487890 PMS1P54277 932 aaKnown RBP4.51□□□□□ -1.69
GPNMB-212ENST00000487890 NFKB2Q00653 900 aa4.51□□□□□ -1.69
GPNMB-212ENST00000487890 FAM50AQ14320 339 aaKnown RBP4.51□□□□□ -1.69
GPNMB-212ENST00000487890 SETDB1Q15047 1291 aa4.51□□□□□ -1.69
GPNMB-212ENST00000487890 HSP90AB2PQ58FF8 381 aa4.51□□□□□ -1.69
GPNMB-212ENST00000487890 TDRD10Q5VZ19 366 aaKnown RBP4.51□□□□□ -1.69
GPNMB-212ENST00000487890 RNF180Q86T96 592 aa4.51□□□□□ -1.69
GPNMB-212ENST00000487890 CERS3Q8IU89 383 aa4.51□□□□□ -1.69
GPNMB-212ENST00000487890 FAM13CQ8NE31 585 aa4.51□□□□□ -1.69
GPNMB-212ENST00000487890 CDC6Q99741 560 aa4.51□□□□□ -1.69
GPNMB-212ENST00000487890 LGR4Q9BXB1 951 aa4.51□□□□□ -1.69
GPNMB-212ENST00000487890 NCOA5Q9HCD5 579 aaKnown RBP4.51□□□□□ -1.69
GPNMB-212ENST00000487890 KCNK4Q9NYG8 393 aa4.51□□□□□ -1.69
GPNMB-212ENST00000487890 MRPS23Q9Y3D9 190 aaKnown RBP4.51□□□□□ -1.69
GPNMB-212ENST00000487890 CEP152O94986 1710 aa4.5□□□□□ -1.69
GPNMB-212ENST00000487890 ARHGEF5Q12774 1597 aa4.5□□□□□ -1.69
GPNMB-212ENST00000487890 TRBV23-1A0A0A0MS06 115 aa4.5□□□□□ -1.69
GPNMB-212ENST00000487890 AGRPO00253 132 aa4.5□□□□□ -1.69
GPNMB-212ENST00000487890 ITGAVP06756 1048 aa4.5□□□□□ -1.69
GPNMB-212ENST00000487890 EPHX1P07099 455 aa4.5□□□□□ -1.69
GPNMB-212ENST00000487890 SLFN14P0C7P3 912 aa4.5□□□□□ -1.69
GPNMB-212ENST00000487890 TSPY4P0CV99 314 aa4.5□□□□□ -1.69
GPNMB-212ENST00000487890 TSPY10P0CW01 314 aa4.5□□□□□ -1.69
GPNMB-212ENST00000487890 NTF4P34130 210 aa4.5□□□□□ -1.69
GPNMB-212ENST00000487890 NKG7Q16617 165 aa4.5□□□□□ -1.69
GPNMB-212ENST00000487890 FNDC3BQ53EP0 1204 aaKnown RBP4.5□□□□□ -1.69
GPNMB-212ENST00000487890 AKAP4Q5JQC9 854 aa4.5□□□□□ -1.69
GPNMB-212ENST00000487890 AXDND1Q5T1B0 1012 aaPredicted RBP4.5□□□□□ -1.69
GPNMB-212ENST00000487890 ZBTB37Q5TC79 503 aa4.5□□□□□ -1.69
GPNMB-212ENST00000487890 CNNM4Q6P4Q7 775 aa4.5□□□□□ -1.69
GPNMB-212ENST00000487890 C1orf229Q6ZS94 237 aaPredicted RBP4.5□□□□□ -1.69
GPNMB-212ENST00000487890 WFDC8Q8IUA0 241 aa4.5□□□□□ -1.69
GPNMB-212ENST00000487890 SCUBE1Q8IWY4 988 aa4.5□□□□□ -1.69
GPNMB-212ENST00000487890 SLFN12Q8IYM2 578 aa4.5□□□□□ -1.69
GPNMB-212ENST00000487890 ZNF513Q8N8E2 541 aaPredicted RBP4.5□□□□□ -1.69
GPNMB-212ENST00000487890 KLHL23Q8NBE8 558 aa4.5□□□□□ -1.69
GPNMB-212ENST00000487890 TMEM87BQ96K49 555 aa4.5□□□□□ -1.69
GPNMB-212ENST00000487890 DHRS1Q96LJ7 313 aa4.5□□□□□ -1.69
GPNMB-212ENST00000487890 FGD4Q96M96 766 aa4.5□□□□□ -1.69
GPNMB-212ENST00000487890 SLC6A18Q96N87 628 aa4.5□□□□□ -1.69
GPNMB-212ENST00000487890 CEP89Q96ST8 783 aa4.5□□□□□ -1.69
GPNMB-212ENST00000487890 APBA2Q99767 749 aa4.5□□□□□ -1.69
GPNMB-212ENST00000487890 TARS2Q9BW92 718 aaKnown RBP4.5□□□□□ -1.69
GPNMB-212ENST00000487890 FBRSQ9HAH7 460 aa4.5□□□□□ -1.69
GPNMB-212ENST00000487890 MBIPQ9NS73 344 aa4.5□□□□□ -1.69
GPNMB-212ENST00000487890 GABBR1Q9UBS5 961 aa4.5□□□□□ -1.69
GPNMB-212ENST00000487890 SUCOQ9UBS9 1254 aaKnown RBP4.5□□□□□ -1.69
GPNMB-212ENST00000487890 PPP1R9AQ9ULJ8 1098 aa4.5□□□□□ -1.69
GPNMB-212ENST00000487890 EID1Q9Y6B2 187 aa4.5□□□□□ -1.69
GPNMB-212ENST00000487890 ZNF142P52746 1687 aaPredicted RBP4.5□□□□□ -1.69
GPNMB-212ENST00000487890 ZMYM3Q14202 1370 aa4.5□□□□□ -1.69
GPNMB-212ENST00000487890 CAMSAP1Q5T5Y3 1602 aa4.5□□□□□ -1.69
GPNMB-212ENST00000487890 MBD5Q9P267 1494 aa4.49□□□□□ -1.69
GPNMB-212ENST00000487890 WASHC2CQ9Y4E1 1318 aa4.49□□□□□ -1.69
GPNMB-212ENST00000487890 CEP170BQ9Y4F5 1589 aaPredicted RBP4.49□□□□□ -1.69
GPNMB-212ENST00000487890 MYOM3Q5VTT5 1437 aa4.49□□□□□ -1.69
GPNMB-212ENST00000487890 CROCC2H7BZ55 1655 aa4.49□□□□□ -1.69
GPNMB-212ENST00000487890 TRAV20A0A0B4J274 112 aa4.49□□□□□ -1.69
GPNMB-212ENST00000487890 ANKRD34BA5PLL1 514 aa4.49□□□□□ -1.69
GPNMB-212ENST00000487890 M0R082 166 aa4.49□□□□□ -1.69
GPNMB-212ENST00000487890 LILRB5O75023 590 aa4.49□□□□□ -1.69
GPNMB-212ENST00000487890 CAPNS1P04632 268 aa4.49□□□□□ -1.69
GPNMB-212ENST00000487890 EPXP11678 715 aa4.49□□□□□ -1.69
GPNMB-212ENST00000487890 SOX5P35711 763 aa4.49□□□□□ -1.69
GPNMB-212ENST00000487890 GRIA2P42262 883 aa4.49□□□□□ -1.69
GPNMB-212ENST00000487890 ZNF143P52747 638 aaPredicted RBP4.49□□□□□ -1.69
GPNMB-212ENST00000487890 YARSP54577 528 aaKnown RBP4.49□□□□□ -1.69
GPNMB-212ENST00000487890 ERVK-24P63145 666 aa4.49□□□□□ -1.69
GPNMB-212ENST00000487890 PPP2R2AP63151 447 aa4.49□□□□□ -1.69
GPNMB-212ENST00000487890 EXOSC10Q01780 885 aaKnown RBP4.49□□□□□ -1.69
GPNMB-212ENST00000487890 HSP90AA2PQ14568 343 aaPredicted RBP4.49□□□□□ -1.69
GPNMB-212ENST00000487890 FOXD4L6Q3SYB3 417 aaPredicted RBP4.49□□□□□ -1.69
GPNMB-212ENST00000487890 BBS9Q3SYG4 887 aa4.49□□□□□ -1.69
GPNMB-212ENST00000487890 MSL1Q68DK7 614 aa4.49□□□□□ -1.69
GPNMB-212ENST00000487890 SLC6A19Q695T7 634 aa4.49□□□□□ -1.69
GPNMB-212ENST00000487890 FOXD4L3Q6VB84 417 aaPredicted RBP4.49□□□□□ -1.69
GPNMB-212ENST00000487890 ILDR2Q71H61 639 aa4.49□□□□□ -1.69
GPNMB-212ENST00000487890 UBE3DQ7Z6J8 389 aa4.49□□□□□ -1.69
GPNMB-212ENST00000487890 STRA8Q7Z7C7 330 aa4.49□□□□□ -1.69
GPNMB-212ENST00000487890 MRPL41Q8IXM3 137 aaKnown RBP4.49□□□□□ -1.69
GPNMB-212ENST00000487890 DMRTC2Q8IXT2 367 aaPredicted RBP4.49□□□□□ -1.69
GPNMB-212ENST00000487890 PHACTR4Q8IZ21 702 aa4.49□□□□□ -1.69
GPNMB-212ENST00000487890 LRRN4CLQ8ND94 238 aa4.49□□□□□ -1.69
GPNMB-212ENST00000487890 ZNF417Q8TAU3 575 aa4.49□□□□□ -1.69
GPNMB-212ENST00000487890 BAHD1Q8TBE0 780 aaPredicted RBP4.49□□□□□ -1.69
GPNMB-212ENST00000487890 UBASH3BQ8TF42 649 aa4.49□□□□□ -1.69
GPNMB-212ENST00000487890 OSBP2Q969R2 916 aa4.49□□□□□ -1.69
GPNMB-212ENST00000487890 ZNF587Q96SQ5 575 aaPredicted RBP4.49□□□□□ -1.69
GPNMB-212ENST00000487890 HAUS7Q99871 368 aa4.49□□□□□ -1.69
GPNMB-212ENST00000487890 DPH2Q9BQC3 489 aaPredicted RBP4.49□□□□□ -1.69
GPNMB-212ENST00000487890 RUSC1Q9BVN2 902 aa4.49□□□□□ -1.69
GPNMB-212ENST00000487890 PICK1Q9NRD5 415 aa4.49□□□□□ -1.69
GPNMB-212ENST00000487890 DISC1Q9NRI5 854 aa4.49□□□□□ -1.69
GPNMB-212ENST00000487890 RAD18Q9NS91 495 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms