RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 TLR6Q9Y2C9 796 aa6.23□□□□□ -1.41
HMGB1P36-201ENST00000487709 NOTOA8MTQ0 251 aa6.22□□□□□ -1.41
HMGB1P36-201ENST00000487709 E9PSI1 815 aa6.22□□□□□ -1.41
HMGB1P36-201ENST00000487709 CELA3BP08861 270 aa6.22□□□□□ -1.41
HMGB1P36-201ENST00000487709 SDHBP21912 280 aa6.22□□□□□ -1.41
HMGB1P36-201ENST00000487709 RPL10P27635 214 aaKnown RBP6.22□□□□□ -1.41
HMGB1P36-201ENST00000487709 GNA15P30679 374 aa6.22□□□□□ -1.41
HMGB1P36-201ENST00000487709 NLRX1Q86UT6 975 aa6.22□□□□□ -1.41
HMGB1P36-201ENST00000487709 DACT3Q96B18 629 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P36-201ENST00000487709 KREMEN1Q96MU8 473 aa6.22□□□□□ -1.41
HMGB1P36-201ENST00000487709 KLHL3Q9UH77 587 aa6.22□□□□□ -1.41
HMGB1P36-201ENST00000487709 ZMYM5Q9UJ78 669 aa6.22□□□□□ -1.41
HMGB1P36-201ENST00000487709 SLC22A31A6NKX4 558 aa6.21□□□□□ -1.42
HMGB1P36-201ENST00000487709 SLC14A2Q15849 920 aa6.21□□□□□ -1.42
HMGB1P36-201ENST00000487709 WAPLQ7Z5K2 1190 aa6.21□□□□□ -1.42
HMGB1P36-201ENST00000487709 GGNQ86UU5 652 aa6.21□□□□□ -1.42
HMGB1P36-201ENST00000487709 SYT8Q8NBV8 401 aa6.21□□□□□ -1.42
HMGB1P36-201ENST00000487709 BPNT1O95861 308 aa6.2□□□□□ -1.42
HMGB1P36-201ENST00000487709 ZNF16P17020 682 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P36-201ENST00000487709 VIPR1P32241 457 aa6.2□□□□□ -1.42
HMGB1P36-201ENST00000487709 NFKB2Q00653 900 aa6.2□□□□□ -1.42
HMGB1P36-201ENST00000487709 PSMD2Q13200 908 aa6.2□□□□□ -1.42
HMGB1P36-201ENST00000487709 MEI1Q5TIA1 1274 aa6.2□□□□□ -1.42
HMGB1P36-201ENST00000487709 CEP128Q6ZU80 1094 aa6.2□□□□□ -1.42
HMGB1P36-201ENST00000487709 ASPNQ9BXN1 380 aa6.2□□□□□ -1.42
HMGB1P36-201ENST00000487709 ADAM7Q9H2U9 754 aa6.2□□□□□ -1.42
HMGB1P36-201ENST00000487709 CNTD2Q9H8S5 307 aa6.2□□□□□ -1.42
HMGB1P36-201ENST00000487709 RNF19AQ9NV58 838 aa6.2□□□□□ -1.42
HMGB1P36-201ENST00000487709 F6X3S4 739 aa6.19□□□□□ -1.42
HMGB1P36-201ENST00000487709 N4BP3O15049 544 aa6.19□□□□□ -1.42
HMGB1P36-201ENST00000487709 ERICH6BQ5W0A0 696 aa6.19□□□□□ -1.42
HMGB1P36-201ENST00000487709 BNC2Q6ZN30 1099 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P36-201ENST00000487709 FBXO33Q7Z6M2 555 aa6.19□□□□□ -1.42
HMGB1P36-201ENST00000487709 SLFN12Q8IYM2 578 aa6.19□□□□□ -1.42
HMGB1P36-201ENST00000487709 PHACTR4Q8IZ21 702 aa6.19□□□□□ -1.42
HMGB1P36-201ENST00000487709 FOXP3Q9BZS1 431 aa6.19□□□□□ -1.42
HMGB1P36-201ENST00000487709 ASCC2Q9H1I8 757 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P36-201ENST00000487709 EPB41L4AQ9HCS5 686 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P36-201ENST00000487709 CHURC1-FNTBB4DL54 471 aa6.18□□□□□ -1.42
HMGB1P36-201ENST00000487709 HRKO00198 91 aa6.18□□□□□ -1.42
HMGB1P36-201ENST00000487709 NRDCO43847 1150 aa6.18□□□□□ -1.42
HMGB1P36-201ENST00000487709 FKTNO75072 461 aa6.18□□□□□ -1.42
HMGB1P36-201ENST00000487709 CHMP4BP1P59074 171 aa6.18□□□□□ -1.42
HMGB1P36-201ENST00000487709 NMIQ13287 307 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P36-201ENST00000487709 TMEM201Q5SNT2 666 aa6.18□□□□□ -1.42
HMGB1P36-201ENST00000487709 DIEXFQ68CQ4 756 aaKnown RBP6.18□□□□□ -1.42
HMGB1P36-201ENST00000487709 SP8Q8IXZ3 490 aa6.18□□□□□ -1.42
HMGB1P36-201ENST00000487709 MAP6Q96JE9 813 aa6.18□□□□□ -1.42
HMGB1P36-201ENST00000487709 CCDC74BQ96LY2 380 aa6.18□□□□□ -1.42
HMGB1P36-201ENST00000487709 REV1Q9UBZ9 1251 aa6.18□□□□□ -1.42
HMGB1P36-201ENST00000487709 VTI1BQ9UEU0 232 aa6.18□□□□□ -1.42
HMGB1P36-201ENST00000487709 AK5Q9Y6K8 562 aa6.18□□□□□ -1.42
HMGB1P36-201ENST00000487709 SORBS3O60504 671 aa6.17□□□□□ -1.42
HMGB1P36-201ENST00000487709 ADRB1P08588 477 aa6.17□□□□□ -1.42
HMGB1P36-201ENST00000487709 CDR1P51861 262 aa6.17□□□□□ -1.42
HMGB1P36-201ENST00000487709 CNKSR3Q6P9H4 555 aa6.17□□□□□ -1.42
HMGB1P36-201ENST00000487709 RNF111Q6ZNA4 994 aa6.17□□□□□ -1.42
HMGB1P36-201ENST00000487709 KIF2CQ99661 725 aa6.17□□□□□ -1.42
HMGB1P36-201ENST00000487709 DUSP9Q99956 384 aaKnown RBP6.17□□□□□ -1.42
HMGB1P36-201ENST00000487709 CRTAC1Q9NQ79 661 aa6.17□□□□□ -1.42
HMGB1P36-201ENST00000487709 ZNF281Q9Y2X9 895 aa6.17□□□□□ -1.42
HMGB1P36-201ENST00000487709 SSU72P8A0A1W2PR75 194 aa6.16□□□□□ -1.42
HMGB1P36-201ENST00000487709 GRIN3BO60391 1043 aa6.16□□□□□ -1.42
HMGB1P36-201ENST00000487709 ZPBP2Q6X784 338 aa6.16□□□□□ -1.42
HMGB1P36-201ENST00000487709 USHBP1Q8N6Y0 703 aa6.16□□□□□ -1.42
HMGB1P36-201ENST00000487709 PHC3Q8NDX5 983 aa6.16□□□□□ -1.42
HMGB1P36-201ENST00000487709 MZB1Q8WU39 189 aa6.16□□□□□ -1.42
HMGB1P36-201ENST00000487709 MRRFQ96E11 262 aaKnown RBP6.16□□□□□ -1.42
HMGB1P36-201ENST00000487709 HHIPL1Q96JK4 782 aa6.16□□□□□ -1.42
HMGB1P36-201ENST00000487709 PLCD4Q9BRC7 762 aa6.16□□□□□ -1.42
HMGB1P36-201ENST00000487709 HDAC8Q9BY41 377 aa6.16□□□□□ -1.42
HMGB1P36-201ENST00000487709 PARP2Q9UGN5 583 aa6.16□□□□□ -1.42
HMGB1P36-201ENST00000487709 TCFL5Q9UL49 500 aa6.16□□□□□ -1.42
HMGB1P36-201ENST00000487709 ADAMTS20P59510 1910 aa6.16□□□□□ -1.42
HMGB1P36-201ENST00000487709 IRS4O14654 1257 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P36-201ENST00000487709 CILPO75339 1184 aa6.15□□□□□ -1.42
HMGB1P36-201ENST00000487709 RLBP1P12271 317 aa6.15□□□□□ -1.42
HMGB1P36-201ENST00000487709 GBP1P32455 592 aa6.15□□□□□ -1.42
HMGB1P36-201ENST00000487709 KIR2DL1P43626 348 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P36-201ENST00000487709 KIR2DL2P43627 348 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P36-201ENST00000487709 KIR3DS1Q14943 382 aa6.15□□□□□ -1.42
HMGB1P36-201ENST00000487709 OLFML2BQ68BL8 750 aa6.15□□□□□ -1.42
HMGB1P36-201ENST00000487709 TMC6Q7Z403 805 aa6.15□□□□□ -1.42
HMGB1P36-201ENST00000487709 TMC4Q7Z404 712 aa6.15□□□□□ -1.42
HMGB1P36-201ENST00000487709 TMEFF1Q8IYR6 380 aa6.15□□□□□ -1.42
HMGB1P36-201ENST00000487709 SYTL5Q8TDW5 730 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P36-201ENST00000487709 TMEM82A0PJX8 343 aa6.14□□□□□ -1.43
HMGB1P36-201ENST00000487709 DNAJA2O60884 412 aa6.14□□□□□ -1.43
HMGB1P36-201ENST00000487709 HTR3BO95264 441 aa6.14□□□□□ -1.43
HMGB1P36-201ENST00000487709 F13A1P00488 732 aa6.14□□□□□ -1.43
HMGB1P36-201ENST00000487709 PNLIPP16233 465 aa6.14□□□□□ -1.43
HMGB1P36-201ENST00000487709 VAMP1P23763 118 aa6.14□□□□□ -1.43
HMGB1P36-201ENST00000487709 PCBP3P57721 371 aaKnown RBP6.14□□□□□ -1.43
HMGB1P36-201ENST00000487709 DAB2P98082 770 aa6.14□□□□□ -1.43
HMGB1P36-201ENST00000487709 TMC3Q7Z5M5 1100 aa6.14□□□□□ -1.43
HMGB1P36-201ENST00000487709 FAM129CQ86XR2 697 aa6.14□□□□□ -1.43
HMGB1P36-201ENST00000487709 BORCS6Q96GS4 357 aa6.14□□□□□ -1.43
HMGB1P36-201ENST00000487709 TCTN2Q96GX1 697 aa6.14□□□□□ -1.43
HMGB1P36-201ENST00000487709 TEPSINQ96N21 525 aa6.14□□□□□ -1.43
HMGB1P36-201ENST00000487709 PWWP2AQ96N64 755 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms