RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 FOXP1Q9H334 677 aaPredicted RBP13.93□□□□□ -0.18
HSPG2-211ENST00000486901 ZBTB1Q9Y2K1 713 aa13.93□□□□□ -0.18
HSPG2-211ENST00000486901 MYH8P13535 1937 aa13.93□□□□□ -0.18
HSPG2-211ENST00000486901 NCK2O43639 380 aa13.93□□□□□ -0.18
HSPG2-211ENST00000486901 ZEB2O60315 1214 aa13.93□□□□□ -0.18
HSPG2-211ENST00000486901 IDEP14735 1019 aa13.93□□□□□ -0.18
HSPG2-211ENST00000486901 UBE3CQ15386 1083 aa13.93□□□□□ -0.18
HSPG2-211ENST00000486901 TSR1Q2NL82 804 aaKnown RBP13.93□□□□□ -0.18
HSPG2-211ENST00000486901 IFIT1BQ5T764 474 aaKnown RBP13.93□□□□□ -0.18
HSPG2-211ENST00000486901 NLRP10Q86W26 655 aa13.93□□□□□ -0.18
HSPG2-211ENST00000486901 SH2D3CQ8N5H7 860 aa13.93□□□□□ -0.18
HSPG2-211ENST00000486901 CENPHQ9H3R5 247 aa13.93□□□□□ -0.18
HSPG2-211ENST00000486901 TTF2Q9UNY4 1162 aaKnown RBP13.93□□□□□ -0.18
HSPG2-211ENST00000486901 LUC7L2Q9Y383 392 aaKnown RBP13.93□□□□□ -0.18
HSPG2-211ENST00000486901 FAM237AA0A1B0GTK4 181 aa13.92□□□□□ -0.18
HSPG2-211ENST00000486901 ESYT3A0FGR9 886 aa13.92□□□□□ -0.18
HSPG2-211ENST00000486901 STIM1Q13586 685 aa13.92□□□□□ -0.18
HSPG2-211ENST00000486901 IL17AQ16552 155 aa13.92□□□□□ -0.18
HSPG2-211ENST00000486901 NACAP1Q9BZK3 213 aa13.92□□□□□ -0.18
HSPG2-211ENST00000486901 CEP131Q9UPN4 1083 aa13.92□□□□□ -0.18
HSPG2-211ENST00000486901 LMO7Q8WWI1 1683 aa13.92□□□□□ -0.18
HSPG2-211ENST00000486901 PKN1Q16512 942 aa13.92□□□□□ -0.18
HSPG2-211ENST00000486901 TCP11X2Q5H9J9 407 aa13.92□□□□□ -0.18
HSPG2-211ENST00000486901 CDKAL1Q5VV42 579 aa13.92□□□□□ -0.18
HSPG2-211ENST00000486901 FBXW10Q5XX13 1052 aa13.92□□□□□ -0.18
HSPG2-211ENST00000486901 TMTC1Q8IUR5 882 aa13.92□□□□□ -0.18
HSPG2-211ENST00000486901 ENAHQ8N8S7 591 aaPredicted RBP13.92□□□□□ -0.18
HSPG2-211ENST00000486901 MSANTD4Q8NCY6 345 aa13.92□□□□□ -0.18
HSPG2-211ENST00000486901 KAT14Q9H8E8 782 aa13.92□□□□□ -0.18
HSPG2-211ENST00000486901 MLXIPQ9HAP2 919 aa13.92□□□□□ -0.18
HSPG2-211ENST00000486901 SAR1BQ9Y6B6 198 aa13.92□□□□□ -0.18
HSPG2-211ENST00000486901 PARP1P09874 1014 aaKnown RBP13.92□□□□□ -0.18
HSPG2-211ENST00000486901 LIFRP42702 1097 aa13.92□□□□□ -0.18
HSPG2-211ENST00000486901 HERVK_113P62684 666 aa13.92□□□□□ -0.18
HSPG2-211ENST00000486901 NT5DC1Q5TFE4 455 aa13.92□□□□□ -0.18
HSPG2-211ENST00000486901 TMC4Q7Z404 712 aa13.92□□□□□ -0.18
HSPG2-211ENST00000486901 RAB21Q9UL25 225 aa13.92□□□□□ -0.18
HSPG2-211ENST00000486901 PCCAP05165 728 aaPredicted RBP13.91□□□□□ -0.18
HSPG2-211ENST00000486901 CCDC96Q2M329 555 aa13.91□□□□□ -0.18
HSPG2-211ENST00000486901 KRT23Q9C075 422 aa13.91□□□□□ -0.18
HSPG2-211ENST00000486901 KANSL2Q9H9L4 492 aa13.91□□□□□ -0.18
HSPG2-211ENST00000486901 CYP2D6P10635 497 aa13.91□□□□□ -0.18
HSPG2-211ENST00000486901 PBX1P40424 430 aa13.91□□□□□ -0.18
HSPG2-211ENST00000486901 STAT6P42226 847 aa13.91□□□□□ -0.18
HSPG2-211ENST00000486901 CCDC178Q5BJE1 867 aa13.91□□□□□ -0.18
HSPG2-211ENST00000486901 KANK3Q6NY19 840 aa13.91□□□□□ -0.18
HSPG2-211ENST00000486901 ANKRD20A12PQ8NF67 263 aa13.91□□□□□ -0.18
HSPG2-211ENST00000486901 FAM207AQ9NSI2 230 aaPredicted RBP13.91□□□□□ -0.18
HSPG2-211ENST00000486901 DMGDHQ9UI17 866 aaKnown RBP13.91□□□□□ -0.18
HSPG2-211ENST00000486901 COG1Q8WTW3 980 aa13.91□□□□□ -0.18
HSPG2-211ENST00000486901 SELENOOQ9BVL4 669 aa13.91□□□□□ -0.18
HSPG2-211ENST00000486901 NOP2P46087 812 aaKnown RBP13.9□□□□□ -0.18
HSPG2-211ENST00000486901 TYW1BQ6NUM6 668 aa13.9□□□□□ -0.18
HSPG2-211ENST00000486901 DNAAF5Q86Y56 855 aa13.9□□□□□ -0.18
HSPG2-211ENST00000486901 LRWD1Q9UFC0 647 aa13.9□□□□□ -0.18
HSPG2-211ENST00000486901 HPCAL4Q9UM19 191 aa13.9□□□□□ -0.18
HSPG2-211ENST00000486901 ZSCAN5CA6NGD5 496 aaPredicted RBP13.9□□□□□ -0.18
HSPG2-211ENST00000486901 BUB1O43683 1085 aa13.9□□□□□ -0.18
HSPG2-211ENST00000486901 FAM71BQ8TC56 605 aa13.9□□□□□ -0.18
HSPG2-211ENST00000486901 CTAGE1Q96RT6 745 aa13.9□□□□□ -0.18
HSPG2-211ENST00000486901 JRKLQ9Y4A0 524 aa13.9□□□□□ -0.18
HSPG2-211ENST00000486901 RIC1Q4ADV7 1423 aa13.9□□□□□ -0.18
HSPG2-211ENST00000486901 SPATA31A3Q5VYP0 1347 aa13.9□□□□□ -0.18
HSPG2-211ENST00000486901 RPN1P04843 607 aaKnown RBP13.89□□□□□ -0.19
HSPG2-211ENST00000486901 IVLP07476 585 aa13.89□□□□□ -0.19
HSPG2-211ENST00000486901 XBP1P17861 261 aa13.89□□□□□ -0.19
HSPG2-211ENST00000486901 ARID5AQ03989 594 aa13.89□□□□□ -0.19
HSPG2-211ENST00000486901 IQUBQ8NA54 791 aa13.89□□□□□ -0.19
HSPG2-211ENST00000486901 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.89□□□□□ -0.19
HSPG2-211ENST00000486901 PIGBQ92521 554 aa13.89□□□□□ -0.19
HSPG2-211ENST00000486901 LRRC1Q9BTT6 524 aa13.89□□□□□ -0.19
HSPG2-211ENST00000486901 TSPYL1Q9H0U9 437 aa13.89□□□□□ -0.19
HSPG2-211ENST00000486901 MYO5AQ9Y4I1 1855 aaKnown RBP13.89□□□□□ -0.19
HSPG2-211ENST00000486901 BACH1O14867 736 aa13.89□□□□□ -0.19
HSPG2-211ENST00000486901 MOCS3O95396 460 aa13.89□□□□□ -0.19
HSPG2-211ENST00000486901 USP14P54578 494 aa13.89□□□□□ -0.19
HSPG2-211ENST00000486901 WHAMMP3Q1A5X7 153 aa13.89□□□□□ -0.19
HSPG2-211ENST00000486901 MAP9Q49MG5 647 aa13.89□□□□□ -0.19
HSPG2-211ENST00000486901 TRIML1Q8N9V2 468 aa13.89□□□□□ -0.19
HSPG2-211ENST00000486901 AATFQ9NY61 560 aaKnown RBP eCLIP13.89□□□□□ -0.19
HSPG2-211ENST00000486901 LOC102724159A0A0B4J2E5 919 aa13.89□□□□□ -0.19
HSPG2-211ENST00000486901 CCDC196A0A1B0GTZ2 297 aa13.89□□□□□ -0.19
HSPG2-211ENST00000486901 GOLGA6CA6NDK9 693 aa13.89□□□□□ -0.19
HSPG2-211ENST00000486901 USP17L12C9JPN9 530 aa13.89□□□□□ -0.19
HSPG2-211ENST00000486901 USP17L21D6R901 530 aa13.89□□□□□ -0.19
HSPG2-211ENST00000486901 CSF1RP07333 972 aa13.89□□□□□ -0.19
HSPG2-211ENST00000486901 GOLGA6DP0CG33 693 aa13.89□□□□□ -0.19
HSPG2-211ENST00000486901 AMPD2Q01433 879 aa13.89□□□□□ -0.19
HSPG2-211ENST00000486901 PWP2Q15269 919 aaKnown RBP13.89□□□□□ -0.19
HSPG2-211ENST00000486901 NFRKBQ6P4R8 1299 aa13.89□□□□□ -0.19
HSPG2-211ENST00000486901 WDR59Q6PJI9 974 aa13.89□□□□□ -0.19
HSPG2-211ENST00000486901 CATIPQ7Z7H3 387 aa13.89□□□□□ -0.19
HSPG2-211ENST00000486901 IRF2BP1Q8IU81 584 aa13.89□□□□□ -0.19
HSPG2-211ENST00000486901 SRBD1Q8N5C6 995 aaKnown RBP13.89□□□□□ -0.19
HSPG2-211ENST00000486901 OR8K1Q8NGG5 319 aa13.89□□□□□ -0.19
HSPG2-211ENST00000486901 BCAS4Q8TDM0 211 aa13.89□□□□□ -0.19
HSPG2-211ENST00000486901 IFT81Q8WYA0 676 aa13.89□□□□□ -0.19
HSPG2-211ENST00000486901 MS4A14Q96JA4 679 aa13.89□□□□□ -0.19
HSPG2-211ENST00000486901 GOLGA6AQ9NYA3 693 aa13.89□□□□□ -0.19
HSPG2-211ENST00000486901 GOLGA8HP0CJ92 632 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms