RNA–Protein interactions for RNA: ENST00000486536.6

USP41-204, Transcript of ubiquitin specific peptidase 41, humanhuman

TSL 2

Gene USP41, Length 1,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-204ENST00000486536 OVOS2A0A0G2JMS6 1433 aa7.57□□□□□ -1.2
USP41-204ENST00000486536 CRB1P82279 1406 aa7.57□□□□□ -1.2
USP41-204ENST00000486536 CEMIPQ8WUJ3 1361 aa7.57□□□□□ -1.2
USP41-204ENST00000486536 SOS1Q07889 1333 aaPredicted RBP7.56□□□□□ -1.2
USP41-204ENST00000486536 ABCA3Q99758 1704 aa7.56□□□□□ -1.2
USP41-204ENST00000486536 HSP90AB1P08238 724 aaKnown RBP7.56□□□□□ -1.2
USP41-204ENST00000486536 IL2RBP14784 551 aa7.56□□□□□ -1.2
USP41-204ENST00000486536 CPB1P15086 417 aa7.56□□□□□ -1.2
USP41-204ENST00000486536 RARSP54136 660 aaKnown RBP7.56□□□□□ -1.2
USP41-204ENST00000486536 CLCQ05315 142 aa7.56□□□□□ -1.2
USP41-204ENST00000486536 EXOSC9Q06265 439 aaKnown RBP7.56□□□□□ -1.2
USP41-204ENST00000486536 TAF7Q15545 349 aaPredicted RBP7.56□□□□□ -1.2
USP41-204ENST00000486536 PTPROQ16827 1216 aa7.56□□□□□ -1.2
USP41-204ENST00000486536 ALDH1L2Q3SY69 923 aa7.56□□□□□ -1.2
USP41-204ENST00000486536 LLGL2Q6P1M3 1020 aa7.56□□□□□ -1.2
USP41-204ENST00000486536 FOXR1Q6PIV2 292 aa7.56□□□□□ -1.2
USP41-204ENST00000486536 GK5Q6ZS86 529 aa7.56□□□□□ -1.2
USP41-204ENST00000486536 REC114Q7Z4M0 266 aa7.56□□□□□ -1.2
USP41-204ENST00000486536 FAM35AQ86V20 835 aa7.56□□□□□ -1.2
USP41-204ENST00000486536 SULF2Q8IWU5 870 aa7.56□□□□□ -1.2
USP41-204ENST00000486536 IFNL2Q8IZJ0 200 aa7.56□□□□□ -1.2
USP41-204ENST00000486536 IL17REQ8NFR9 667 aa7.56□□□□□ -1.2
USP41-204ENST00000486536 TSR2Q969E8 191 aaKnown RBP7.56□□□□□ -1.2
USP41-204ENST00000486536 GPATCH3Q96I76 525 aa7.56□□□□□ -1.2
USP41-204ENST00000486536 DNAJC7Q99615 494 aa7.56□□□□□ -1.2
USP41-204ENST00000486536 EMILIN2Q9BXX0 1053 aa7.56□□□□□ -1.2
USP41-204ENST00000486536 ADAM19Q9H013 955 aa7.56□□□□□ -1.2
USP41-204ENST00000486536 ACTR10Q9NZ32 417 aa7.56□□□□□ -1.2
USP41-204ENST00000486536 SOX13Q9UN79 622 aa7.56□□□□□ -1.2
USP41-204ENST00000486536 THRAP3Q9Y2W1 955 aaKnown RBP7.56□□□□□ -1.2
USP41-204ENST00000486536 MSRB2Q9Y3D2 182 aa7.56□□□□□ -1.2
USP41-204ENST00000486536 LAS1LQ9Y4W2 734 aaKnown RBP7.56□□□□□ -1.2
USP41-204ENST00000486536 FAM208AQ9UK61 1670 aaKnown RBP7.56□□□□□ -1.2
USP41-204ENST00000486536 RNMTO43148 476 aaKnown RBP7.55□□□□□ -1.2
USP41-204ENST00000486536 GFRA3O60609 400 aa7.55□□□□□ -1.2
USP41-204ENST00000486536 BPNT1O95861 308 aa7.55□□□□□ -1.2
USP41-204ENST00000486536 PHKG2P15735 406 aa7.55□□□□□ -1.2
USP41-204ENST00000486536 PTPRAP18433 802 aa7.55□□□□□ -1.2
USP41-204ENST00000486536 RNF187Q5TA31 235 aaPredicted RBP7.55□□□□□ -1.2
USP41-204ENST00000486536 ADAMTSL4Q6UY14 1074 aa7.55□□□□□ -1.2
USP41-204ENST00000486536 LILRB2Q8N423 598 aa7.55□□□□□ -1.2
USP41-204ENST00000486536 ZCRB1Q8TBF4 217 aaKnown RBP7.55□□□□□ -1.2
USP41-204ENST00000486536 TRERF1Q96PN7 1200 aa7.55□□□□□ -1.2
USP41-204ENST00000486536 AAASQ9NRG9 546 aa7.55□□□□□ -1.2
USP41-204ENST00000486536 DACH1Q9UI36 760 aa7.55□□□□□ -1.2
USP41-204ENST00000486536 USP21Q9UK80 565 aa7.55□□□□□ -1.2
USP41-204ENST00000486536 ZNRF3Q9ULT6 936 aa7.55□□□□□ -1.2
USP41-204ENST00000486536 MEGF6O75095 1541 aa7.55□□□□□ -1.2
USP41-204ENST00000486536 COL14A1Q05707 1796 aaKnown RBP7.55□□□□□ -1.2
USP41-204ENST00000486536 PCDH11XQ9BZA7 1347 aa7.54□□□□□ -1.2
USP41-204ENST00000486536 PCDH11YQ9BZA8 1340 aa7.54□□□□□ -1.2
USP41-204ENST00000486536 SRCAPQ6ZRS2 3230 aa7.54□□□□□ -1.2
USP41-204ENST00000486536 SLIT2O94813 1529 aa7.54□□□□□ -1.2
USP41-204ENST00000486536 C2CD2LO14523 706 aa7.54□□□□□ -1.2
USP41-204ENST00000486536 ST8SIA5O15466 376 aa7.54□□□□□ -1.2
USP41-204ENST00000486536 SIN3BO75182 1162 aa7.54□□□□□ -1.2
USP41-204ENST00000486536 VAMP4O75379 141 aa7.54□□□□□ -1.2
USP41-204ENST00000486536 IMPDH2P12268 514 aa7.54□□□□□ -1.2
USP41-204ENST00000486536 IGBP1P78318 339 aa7.54□□□□□ -1.2
USP41-204ENST00000486536 TEFQ10587 303 aa7.54□□□□□ -1.2
USP41-204ENST00000486536 DDR2Q16832 855 aa7.54□□□□□ -1.2
USP41-204ENST00000486536 ZNF468Q5VIY5 522 aaPredicted RBP7.54□□□□□ -1.2
USP41-204ENST00000486536 RBBP8NLQ8NC74 664 aaPredicted RBP7.54□□□□□ -1.2
USP41-204ENST00000486536 SH3TC2Q8TF17 1288 aa7.54□□□□□ -1.2
USP41-204ENST00000486536 KCNB2Q92953 911 aa7.54□□□□□ -1.2
USP41-204ENST00000486536 DCAF5Q96JK2 942 aa7.54□□□□□ -1.2
USP41-204ENST00000486536 CHMP4AQ9BY43 222 aa7.54□□□□□ -1.2
USP41-204ENST00000486536 TNKS2Q9H2K2 1166 aa7.54□□□□□ -1.2
USP41-204ENST00000486536 EHMT1Q9H9B1 1298 aa7.54□□□□□ -1.2
USP41-204ENST00000486536 TSPYL4Q9UJ04 414 aa7.54□□□□□ -1.2
USP41-204ENST00000486536 TRPC5Q9UL62 973 aaPredicted RBP7.54□□□□□ -1.2
USP41-204ENST00000486536 GPR25O00155 361 aa7.53□□□□□ -1.2
USP41-204ENST00000486536 NRG2O14511 850 aaPredicted RBP7.53□□□□□ -1.2
USP41-204ENST00000486536 PDPK1O15530 556 aa7.53□□□□□ -1.2
USP41-204ENST00000486536 ESRRAP11474 423 aaPredicted RBP7.53□□□□□ -1.2
USP41-204ENST00000486536 IBSPP21815 317 aaPredicted RBP7.53□□□□□ -1.2
USP41-204ENST00000486536 PCBP4P57723 403 aaKnown RBP7.53□□□□□ -1.2
USP41-204ENST00000486536 PTPN11Q06124 597 aaPredicted RBP7.53□□□□□ -1.2
USP41-204ENST00000486536 IFRD2Q12894 506 aaPredicted RBP7.53□□□□□ -1.2
USP41-204ENST00000486536 PDE3AQ14432 1141 aa7.53□□□□□ -1.2
USP41-204ENST00000486536 FXNQ16595 210 aa7.53□□□□□ -1.2
USP41-204ENST00000486536 TWISTNBQ3B726 338 aaPredicted RBP7.53□□□□□ -1.2
USP41-204ENST00000486536 PLEKHG4Q58EX7 1191 aa7.53□□□□□ -1.2
USP41-204ENST00000486536 PERM1Q5SV97 790 aa7.53□□□□□ -1.2
USP41-204ENST00000486536 ELMSAN1Q6PJG2 1045 aa7.53□□□□□ -1.2
USP41-204ENST00000486536 MPRIPQ6WCQ1 1025 aa7.53□□□□□ -1.2
USP41-204ENST00000486536 UNC5CLQ8IV45 518 aa7.53□□□□□ -1.2
USP41-204ENST00000486536 DDX54Q8TDD1 881 aaKnown RBP7.53□□□□□ -1.2
USP41-204ENST00000486536 LACRTQ9GZZ8 138 aa7.53□□□□□ -1.2
USP41-204ENST00000486536 SMG9Q9H0W8 520 aaKnown RBP7.53□□□□□ -1.2
USP41-204ENST00000486536 KANSL2Q9H9L4 492 aa7.53□□□□□ -1.2
USP41-204ENST00000486536 LGR6Q9HBX8 967 aa7.53□□□□□ -1.2
USP41-204ENST00000486536 SH2B1Q9NRF2 756 aaPredicted RBP7.53□□□□□ -1.2
USP41-204ENST00000486536 PCDHB14Q9Y5E9 798 aa7.53□□□□□ -1.2
USP41-204ENST00000486536 KIF16BQ96L93 1317 aa7.52□□□□□ -1.2
USP41-204ENST00000486536 DISP2A7MBM2 1401 aa7.52□□□□□ -1.2
USP41-204ENST00000486536 hCG_2014768A0A024R1R8 64 aa7.52□□□□□ -1.21
USP41-204ENST00000486536 FAM177BA6PVY3 158 aa7.52□□□□□ -1.21
USP41-204ENST00000486536 CYP27B1O15528 508 aa7.52□□□□□ -1.21
USP41-204ENST00000486536 BCAR3O75815 825 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms