RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 TCP11X2Q5H9J9 407 aa25.42■■□□□ 1.66
CLN5-202ENST00000485938 IQCA1Q86XH1 822 aa25.42■■□□□ 1.66
CLN5-202ENST00000485938 TAB2Q9NYJ8 693 aa25.42■■□□□ 1.66
CLN5-202ENST00000485938 BAZ2AQ9UIF9 1905 aaKnown RBP25.42■■□□□ 1.66
CLN5-202ENST00000485938 ZNF804BA4D1E1 1349 aa25.42■■□□□ 1.66
CLN5-202ENST00000485938 DDAH1O94760 285 aa25.42■■□□□ 1.66
CLN5-202ENST00000485938 FGRP09769 529 aa25.42■■□□□ 1.66
CLN5-202ENST00000485938 EIF5P55010 431 aaKnown RBP25.42■■□□□ 1.66
CLN5-202ENST00000485938 IL17AQ16552 155 aa25.42■■□□□ 1.66
CLN5-202ENST00000485938 NUP88Q99567 741 aaPredicted RBP25.42■■□□□ 1.66
CLN5-202ENST00000485938 PDE11AQ9HCR9 933 aa25.42■■□□□ 1.66
CLN5-202ENST00000485938 ABCB6Q9NP58 842 aa25.42■■□□□ 1.66
CLN5-202ENST00000485938 KCNJ18B7U540 433 aa25.41■■□□□ 1.66
CLN5-202ENST00000485938 KCNJ12Q14500 433 aa25.41■■□□□ 1.66
CLN5-202ENST00000485938 MCM6Q14566 821 aa25.41■■□□□ 1.66
CLN5-202ENST00000485938 NELFBQ8WX92 580 aa25.41■■□□□ 1.66
CLN5-202ENST00000485938 PYM1Q9BRP8 204 aaKnown RBP25.41■■□□□ 1.66
CLN5-202ENST00000485938 BRIP1Q9BX63 1249 aa25.41■■□□□ 1.66
CLN5-202ENST00000485938 CACNA1SQ13698 1873 aa25.41■■□□□ 1.66
CLN5-202ENST00000485938 MYH13Q9UKX3 1938 aa25.4■■□□□ 1.66
CLN5-202ENST00000485938 CTAGE15A4D2H0 777 aa25.4■■□□□ 1.66
CLN5-202ENST00000485938 RHOXF2BP0C7M4 288 aa25.4■■□□□ 1.66
CLN5-202ENST00000485938 CTAGE8P0CG41 777 aa25.4■■□□□ 1.66
CLN5-202ENST00000485938 TRAPPC10P48553 1259 aa25.4■■□□□ 1.66
CLN5-202ENST00000485938 PIP4K2BP78356 416 aa25.4■■□□□ 1.66
CLN5-202ENST00000485938 ZNF658Q5TYW1 1059 aaPredicted RBP25.4■■□□□ 1.66
CLN5-202ENST00000485938 CTAGE6Q86UF2 777 aa25.4■■□□□ 1.66
CLN5-202ENST00000485938 CTAGE4Q8IX94 777 aa25.4■■□□□ 1.66
CLN5-202ENST00000485938 SRBD1Q8N5C6 995 aaKnown RBP25.4■■□□□ 1.66
CLN5-202ENST00000485938 RHOXF2Q9BQY4 288 aa25.4■■□□□ 1.66
CLN5-202ENST00000485938 TMEM51Q9NW97 253 aa25.4■■□□□ 1.66
CLN5-202ENST00000485938 CAPN2P17655 700 aa25.4■■□□□ 1.66
CLN5-202ENST00000485938 DYNLL1P63167 89 aaKnown RBP25.4■■□□□ 1.66
CLN5-202ENST00000485938 AMPD2Q01433 879 aa25.4■■□□□ 1.66
CLN5-202ENST00000485938 ANKRD20A12PQ8NF67 263 aa25.4■■□□□ 1.66
CLN5-202ENST00000485938 SLF1Q9BQI6 1058 aa25.4■■□□□ 1.66
CLN5-202ENST00000485938 COL1A1P02452 1464 aaPredicted RBP25.39■■□□□ 1.66
CLN5-202ENST00000485938 PCP11498 1178 aaKnown RBP25.39■■□□□ 1.66
CLN5-202ENST00000485938 KRT9P35527 623 aa25.39■■□□□ 1.66
CLN5-202ENST00000485938 VSNL1P62760 191 aa25.39■■□□□ 1.66
CLN5-202ENST00000485938 RAD51AP2Q09MP3 1159 aa25.39■■□□□ 1.66
CLN5-202ENST00000485938 PIK3AP1Q6ZUJ8 805 aa25.39■■□□□ 1.66
CLN5-202ENST00000485938 ZSCAN26Q16670 478 aa25.38■■□□□ 1.65
CLN5-202ENST00000485938 SUGCTQ9HAC7 445 aa25.38■■□□□ 1.65
CLN5-202ENST00000485938 RPN1P04843 607 aaKnown RBP25.38■■□□□ 1.65
CLN5-202ENST00000485938 MCM7P33993 719 aa25.38■■□□□ 1.65
CLN5-202ENST00000485938 RMND1Q9NWS8 449 aa25.38■■□□□ 1.65
CLN5-202ENST00000485938 PHLPP1O60346 1717 aa25.38■■□□□ 1.65
CLN5-202ENST00000485938 COL4A1P02462 1669 aa25.38■■□□□ 1.65
CLN5-202ENST00000485938 GYG1P46976 350 aa25.37■■□□□ 1.65
CLN5-202ENST00000485938 PARP10Q53GL7 1025 aa25.37■■□□□ 1.65
CLN5-202ENST00000485938 CTR9Q6PD62 1173 aa25.37■■□□□ 1.65
CLN5-202ENST00000485938 MYO6Q9UM54 1294 aa25.37■■□□□ 1.65
CLN5-202ENST00000485938 REXO2Q9Y3B8 237 aaKnown RBP25.37■■□□□ 1.65
CLN5-202ENST00000485938 EIF3JO75822 258 aaKnown RBP25.37■■□□□ 1.65
CLN5-202ENST00000485938 SCG2P13521 617 aa25.37■■□□□ 1.65
CLN5-202ENST00000485938 LMAN1P49257 510 aa25.37■■□□□ 1.65
CLN5-202ENST00000485938 INTS5Q6P9B9 1019 aaKnown RBP25.37■■□□□ 1.65
CLN5-202ENST00000485938 NOA1Q8NC60 698 aaKnown RBP25.37■■□□□ 1.65
CLN5-202ENST00000485938 CHP1Q99653 195 aa25.37■■□□□ 1.65
CLN5-202ENST00000485938 GDAQ9Y2T3 454 aa25.37■■□□□ 1.65
CLN5-202ENST00000485938 BAZ2BQ9UIF8 2168 aaKnown RBP25.36■■□□□ 1.65
CLN5-202ENST00000485938 ADAMTS3O15072 1205 aa25.36■■□□□ 1.65
CLN5-202ENST00000485938 NTSR2O95665 410 aa25.36■■□□□ 1.65
CLN5-202ENST00000485938 NLRP5P59047 1200 aa25.36■■□□□ 1.65
CLN5-202ENST00000485938 CTCFLQ8NI51 663 aaPredicted RBP25.36■■□□□ 1.65
CLN5-202ENST00000485938 BTG4Q9NY30 223 aa25.36■■□□□ 1.65
CLN5-202ENST00000485938 VPS18Q9P253 973 aa25.36■■□□□ 1.65
CLN5-202ENST00000485938 TUBBP07437 444 aa25.36■■□□□ 1.65
CLN5-202ENST00000485938 PRCPP42785 496 aa25.36■■□□□ 1.65
CLN5-202ENST00000485938 UBXN1Q04323 297 aa25.36■■□□□ 1.65
CLN5-202ENST00000485938 IRF2BP1Q8IU81 584 aa25.36■■□□□ 1.65
CLN5-202ENST00000485938 ZNF384Q8TF68 577 aa25.36■■□□□ 1.65
CLN5-202ENST00000485938 GNL3LQ9NVN8 582 aaKnown RBP25.36■■□□□ 1.65
CLN5-202ENST00000485938 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.36■■□□□ 1.65
CLN5-202ENST00000485938 EPN1Q9Y6I3 576 aaPredicted RBP25.36■■□□□ 1.65
CLN5-202ENST00000485938 NDUFA10O95299 355 aa25.35■■□□□ 1.65
CLN5-202ENST00000485938 WWC2Q6AWC2 1192 aa25.35■■□□□ 1.65
CLN5-202ENST00000485938 GOLGA5Q8TBA6 731 aa25.35■■□□□ 1.65
CLN5-202ENST00000485938 TRERF1Q96PN7 1200 aa25.35■■□□□ 1.65
CLN5-202ENST00000485938 GBP3Q9H0R5 595 aa25.35■■□□□ 1.65
CLN5-202ENST00000485938 MAPK8IP1Q9UQF2 711 aa25.35■■□□□ 1.65
CLN5-202ENST00000485938 LAMB2P55268 1798 aa25.35■■□□□ 1.65
CLN5-202ENST00000485938 N4BP1O75113 896 aaKnown RBP25.35■■□□□ 1.65
CLN5-202ENST00000485938 CAMTA2O94983 1202 aa25.35■■□□□ 1.65
CLN5-202ENST00000485938 VEGFAP15692 232 aaPredicted RBP25.35■■□□□ 1.65
CLN5-202ENST00000485938 PFKFB3Q16875 520 aaPredicted RBP25.35■■□□□ 1.65
CLN5-202ENST00000485938 ARL6IP4Q66PJ3 421 aaKnown RBP25.35■■□□□ 1.65
CLN5-202ENST00000485938 WTIPA6NIX2 430 aaPredicted RBP25.34■■□□□ 1.65
CLN5-202ENST00000485938 USP17L12C9JPN9 530 aa25.34■■□□□ 1.65
CLN5-202ENST00000485938 USP17L21D6R901 530 aa25.34■■□□□ 1.65
CLN5-202ENST00000485938 H7C1D1 291 aa25.34■■□□□ 1.65
CLN5-202ENST00000485938 NMT2O60551 498 aa25.34■■□□□ 1.65
CLN5-202ENST00000485938 LONP1P36776 959 aaKnown RBP25.34■■□□□ 1.65
CLN5-202ENST00000485938 CASP8Q14790 479 aa25.34■■□□□ 1.65
CLN5-202ENST00000485938 C4orf32Q8N8J7 132 aa25.34■■□□□ 1.65
CLN5-202ENST00000485938 CCDC87Q9NVE4 849 aa25.34■■□□□ 1.65
CLN5-202ENST00000485938 TTC26A0AVF1 554 aa25.34■■□□□ 1.65
CLN5-202ENST00000485938 PARP1P09874 1014 aaKnown RBP25.34■■□□□ 1.65
CLN5-202ENST00000485938 NCAPH2Q6IBW4 605 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms