RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 CEP63Q96MT8 703 aa7.05□□□□□ -1.28
NHLRC3-205ENST00000485407 FERD3LQ96RJ6 166 aa7.05□□□□□ -1.28
NHLRC3-205ENST00000485407 CEP89Q96ST8 783 aa7.05□□□□□ -1.28
NHLRC3-205ENST00000485407 FEZ1Q99689 392 aa7.05□□□□□ -1.28
NHLRC3-205ENST00000485407 LIN7BQ9HAP6 207 aa7.05□□□□□ -1.28
NHLRC3-205ENST00000485407 LGR6Q9HBX8 967 aa7.05□□□□□ -1.28
NHLRC3-205ENST00000485407 ATG3Q9NT62 314 aa7.05□□□□□ -1.28
NHLRC3-205ENST00000485407 TMEM260Q9NX78 707 aa7.05□□□□□ -1.28
NHLRC3-205ENST00000485407 KANSL3Q9P2N6 904 aa7.05□□□□□ -1.28
NHLRC3-205ENST00000485407 GABBR1Q9UBS5 961 aa7.05□□□□□ -1.28
NHLRC3-205ENST00000485407 DNMT3LQ9UJW3 386 aa7.05□□□□□ -1.28
NHLRC3-205ENST00000485407 MAPK8IP1Q9UQF2 711 aa7.05□□□□□ -1.28
NHLRC3-205ENST00000485407 DLG5Q8TDM6 1919 aa7.05□□□□□ -1.28
NHLRC3-205ENST00000485407 PALLDQ8WX93 1383 aa7.05□□□□□ -1.28
NHLRC3-205ENST00000485407 LOC102724428A0A0B4J2F2 783 aa7.04□□□□□ -1.28
NHLRC3-205ENST00000485407 TLR3O15455 904 aaKnown RBP7.04□□□□□ -1.28
NHLRC3-205ENST00000485407 CELA3AP09093 270 aa7.04□□□□□ -1.28
NHLRC3-205ENST00000485407 VSIG8P0DPA2 414 aa7.04□□□□□ -1.28
NHLRC3-205ENST00000485407 GPC1P35052 558 aa7.04□□□□□ -1.28
NHLRC3-205ENST00000485407 TMPOP42166 694 aaKnown RBP7.04□□□□□ -1.28
NHLRC3-205ENST00000485407 SIK1P57059 783 aa7.04□□□□□ -1.28
NHLRC3-205ENST00000485407 RIPK4P57078 832 aa7.04□□□□□ -1.28
NHLRC3-205ENST00000485407 RASGRF1Q13972 1273 aa7.04□□□□□ -1.28
NHLRC3-205ENST00000485407 SEPT6Q14141 434 aa7.04□□□□□ -1.28
NHLRC3-205ENST00000485407 MTERF2Q49AM1 385 aa7.04□□□□□ -1.28
NHLRC3-205ENST00000485407 ODR4Q5SWX8 454 aa7.04□□□□□ -1.28
NHLRC3-205ENST00000485407 LARP1BQ659C4 914 aaKnown RBP7.04□□□□□ -1.28
NHLRC3-205ENST00000485407 DIEXFQ68CQ4 756 aaKnown RBP7.04□□□□□ -1.28
NHLRC3-205ENST00000485407 TTBK2Q6IQ55 1244 aa7.04□□□□□ -1.28
NHLRC3-205ENST00000485407 NGEFQ8N5V2 710 aa7.04□□□□□ -1.28
NHLRC3-205ENST00000485407 FAM169BQ8N8A8 192 aa7.04□□□□□ -1.28
NHLRC3-205ENST00000485407 CEP44Q9C0F1 390 aa7.04□□□□□ -1.28
NHLRC3-205ENST00000485407 LRRC4BQ9NT99 713 aa7.04□□□□□ -1.28
NHLRC3-205ENST00000485407 TYW1Q9NV66 732 aaKnown RBP7.04□□□□□ -1.28
NHLRC3-205ENST00000485407 BABAM1Q9NWV8 329 aa7.04□□□□□ -1.28
NHLRC3-205ENST00000485407 MAGEC2Q9UBF1 373 aaPredicted RBP7.04□□□□□ -1.28
NHLRC3-205ENST00000485407 CCNL1Q9UK58 526 aaPredicted RBP7.04□□□□□ -1.28
NHLRC3-205ENST00000485407 ASAP1Q9ULH1 1129 aa7.04□□□□□ -1.28
NHLRC3-205ENST00000485407 LEMD3Q9Y2U8 911 aa7.04□□□□□ -1.28
NHLRC3-205ENST00000485407 GJA3Q9Y6H8 435 aa7.04□□□□□ -1.28
NHLRC3-205ENST00000485407 SIPA1L3O60292 1781 aaPredicted RBP7.03□□□□□ -1.28
NHLRC3-205ENST00000485407 PHF20L1A8MW92 1017 aa7.03□□□□□ -1.28
NHLRC3-205ENST00000485407 CYP2E1P05181 493 aaPredicted RBP7.03□□□□□ -1.28
NHLRC3-205ENST00000485407 LMNB1P20700 586 aa7.03□□□□□ -1.28
NHLRC3-205ENST00000485407 SQSTM1Q13501 440 aa7.03□□□□□ -1.28
NHLRC3-205ENST00000485407 TAF7Q15545 349 aaPredicted RBP7.03□□□□□ -1.28
NHLRC3-205ENST00000485407 CCDC184Q52MB2 194 aa7.03□□□□□ -1.28
NHLRC3-205ENST00000485407 PEAR1Q5VY43 1037 aaPredicted RBP7.03□□□□□ -1.28
NHLRC3-205ENST00000485407 SLITRK4Q8IW52 837 aa7.03□□□□□ -1.28
NHLRC3-205ENST00000485407 FLAD1Q8NFF5 587 aa7.03□□□□□ -1.28
NHLRC3-205ENST00000485407 MORC4Q8TE76 937 aa7.03□□□□□ -1.28
NHLRC3-205ENST00000485407 ZFYVE1Q9HBF4 777 aa7.03□□□□□ -1.28
NHLRC3-205ENST00000485407 ABCB6Q9NP58 842 aa7.03□□□□□ -1.28
NHLRC3-205ENST00000485407 TFCP2L1Q9NZI6 479 aa7.03□□□□□ -1.28
NHLRC3-205ENST00000485407 TAF1LQ8IZX4 1826 aa7.03□□□□□ -1.28
NHLRC3-205ENST00000485407 PXDNLA1KZ92 1463 aa7.03□□□□□ -1.28
NHLRC3-205ENST00000485407 TTLL8A6PVC2 850 aa7.02□□□□□ -1.29
NHLRC3-205ENST00000485407 SPINT1O43278 529 aa7.02□□□□□ -1.29
NHLRC3-205ENST00000485407 PPFIA3O75145 1194 aa7.02□□□□□ -1.29
NHLRC3-205ENST00000485407 LORP23490 312 aaPredicted RBP7.02□□□□□ -1.29
NHLRC3-205ENST00000485407 GRNP28799 593 aaKnown RBP7.02□□□□□ -1.29
NHLRC3-205ENST00000485407 CNGA1P29973 690 aa7.02□□□□□ -1.29
NHLRC3-205ENST00000485407 GIPRP48546 466 aa7.02□□□□□ -1.29
NHLRC3-205ENST00000485407 RNF144AP50876 292 aaPredicted RBP7.02□□□□□ -1.29
NHLRC3-205ENST00000485407 LBX1P52954 281 aa7.02□□□□□ -1.29
NHLRC3-205ENST00000485407 CALD1Q05682 793 aaKnown RBP7.02□□□□□ -1.29
NHLRC3-205ENST00000485407 FXNQ16595 210 aa7.02□□□□□ -1.29
NHLRC3-205ENST00000485407 TKFCQ3LXA3 575 aa7.02□□□□□ -1.29
NHLRC3-205ENST00000485407 C2orf27AQ580R0 203 aa7.02□□□□□ -1.29
NHLRC3-205ENST00000485407 ZNF790Q6PG37 636 aa7.02□□□□□ -1.29
NHLRC3-205ENST00000485407 CCAR1Q8IX12 1150 aaKnown RBP7.02□□□□□ -1.29
NHLRC3-205ENST00000485407 TTC5Q8N0Z6 440 aa7.02□□□□□ -1.29
NHLRC3-205ENST00000485407 ZIC5Q96T25 663 aa7.02□□□□□ -1.29
NHLRC3-205ENST00000485407 TEX13AQ9BXU3 409 aaPredicted RBP7.02□□□□□ -1.29
NHLRC3-205ENST00000485407 HOMER2Q9NSB8 354 aa7.02□□□□□ -1.29
NHLRC3-205ENST00000485407 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.02□□□□□ -1.29
NHLRC3-205ENST00000485407 KDM2BQ8NHM5 1336 aa7.01□□□□□ -1.29
NHLRC3-205ENST00000485407 BTBD11A6QL63 1104 aa7.01□□□□□ -1.29
NHLRC3-205ENST00000485407 APAF1O14727 1248 aa7.01□□□□□ -1.29
NHLRC3-205ENST00000485407 EGFRP00533 1210 aa7.01□□□□□ -1.29
NHLRC3-205ENST00000485407 TFE3P19532 575 aaPredicted RBP7.01□□□□□ -1.29
NHLRC3-205ENST00000485407 ATP4AP20648 1035 aa7.01□□□□□ -1.29
NHLRC3-205ENST00000485407 TYRO3Q06418 890 aa7.01□□□□□ -1.29
NHLRC3-205ENST00000485407 TCEA2Q15560 299 aa7.01□□□□□ -1.29
NHLRC3-205ENST00000485407 PPP2R5EQ16537 467 aa7.01□□□□□ -1.29
NHLRC3-205ENST00000485407 AGMOQ6ZNB7 445 aa7.01□□□□□ -1.29
NHLRC3-205ENST00000485407 MCM10Q7L590 875 aa7.01□□□□□ -1.29
NHLRC3-205ENST00000485407 CCDC146Q8IYE0 955 aa7.01□□□□□ -1.29
NHLRC3-205ENST00000485407 OR6P1Q8NGX9 317 aa7.01□□□□□ -1.29
NHLRC3-205ENST00000485407 FBXO27Q8NI29 283 aa7.01□□□□□ -1.29
NHLRC3-205ENST00000485407 THAP3Q8WTV1 239 aaPredicted RBP7.01□□□□□ -1.29
NHLRC3-205ENST00000485407 JARID2Q92833 1246 aaPredicted RBP7.01□□□□□ -1.29
NHLRC3-205ENST00000485407 FMNL2Q96PY5 1086 aa7.01□□□□□ -1.29
NHLRC3-205ENST00000485407 INSM2Q96T92 566 aaPredicted RBP7.01□□□□□ -1.29
NHLRC3-205ENST00000485407 IER2Q9BTL4 223 aa7.01□□□□□ -1.29
NHLRC3-205ENST00000485407 POLMQ9NP87 494 aaPredicted RBP7.01□□□□□ -1.29
NHLRC3-205ENST00000485407 PFDN2Q9UHV9 154 aa7.01□□□□□ -1.29
NHLRC3-205ENST00000485407 PRR12Q9ULL5 1215 aa7.01□□□□□ -1.29
NHLRC3-205ENST00000485407 UBR2Q8IWV8 1755 aa7□□□□□ -1.29
NHLRC3-205ENST00000485407 C5P01031 1676 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms