RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 SSRP1Q08945 709 aaKnown RBP16.89■□□□□ 0.29
LRIF1-202ENST00000485275 CPLX2Q6PUV4 134 aaKnown RBP16.89■□□□□ 0.29
LRIF1-202ENST00000485275 FAM184AQ8NB25 1140 aa16.89■□□□□ 0.29
LRIF1-202ENST00000485275 UBA5Q9GZZ9 404 aa16.89■□□□□ 0.29
LRIF1-202ENST00000485275 ARHGEF10LQ9HCE6 1279 aa16.89■□□□□ 0.29
LRIF1-202ENST00000485275 GPCPD1Q9NPB8 672 aa16.89■□□□□ 0.29
LRIF1-202ENST00000485275 RAD21O60216 631 aa16.88■□□□□ 0.29
LRIF1-202ENST00000485275 GUCY1B3Q02153 619 aa16.88■□□□□ 0.29
LRIF1-202ENST00000485275 ASPRV1Q53RT3 343 aa16.88■□□□□ 0.29
LRIF1-202ENST00000485275 CNKSR2Q8WXI2 1034 aa16.88■□□□□ 0.29
LRIF1-202ENST00000485275 PIBF1Q8WXW3 757 aa16.88■□□□□ 0.29
LRIF1-202ENST00000485275 GMCL1Q96IK5 515 aa16.88■□□□□ 0.29
LRIF1-202ENST00000485275 CLMNQ96JQ2 1002 aa16.88■□□□□ 0.29
LRIF1-202ENST00000485275 GINM1Q9NU53 330 aa16.88■□□□□ 0.29
LRIF1-202ENST00000485275 SYNPO2Q9UMS6 1093 aa16.88■□□□□ 0.29
LRIF1-202ENST00000485275 V9GY48 417 aaPredicted RBP16.88■□□□□ 0.29
LRIF1-202ENST00000485275 VPS37CA5D8V6 355 aaPredicted RBP16.87■□□□□ 0.29
LRIF1-202ENST00000485275 PRPF3O43395 683 aaKnown RBP16.87■□□□□ 0.29
LRIF1-202ENST00000485275 SLC16A2P36021 539 aa16.87■□□□□ 0.29
LRIF1-202ENST00000485275 CCDC96Q2M329 555 aa16.87■□□□□ 0.29
LRIF1-202ENST00000485275 TNPO1Q92973 898 aaKnown RBP16.87■□□□□ 0.29
LRIF1-202ENST00000485275 ALG1Q9BT22 464 aa16.87■□□□□ 0.29
LRIF1-202ENST00000485275 SPZ1Q9BXG8 430 aa16.87■□□□□ 0.29
LRIF1-202ENST00000485275 VCPKMTQ9H867 229 aa16.87■□□□□ 0.29
LRIF1-202ENST00000485275 PARP14Q460N5 1801 aa16.87■□□□□ 0.29
LRIF1-202ENST00000485275 PPP1R12BO60237 982 aaPredicted RBP16.87■□□□□ 0.29
LRIF1-202ENST00000485275 DEXIO95424 95 aa16.87■□□□□ 0.29
LRIF1-202ENST00000485275 SLC1A4P43007 532 aa16.87■□□□□ 0.29
LRIF1-202ENST00000485275 NUCB2P80303 420 aa16.87■□□□□ 0.29
LRIF1-202ENST00000485275 MTMR2Q13614 643 aa16.87■□□□□ 0.29
LRIF1-202ENST00000485275 MAP3K11Q16584 847 aa16.87■□□□□ 0.29
LRIF1-202ENST00000485275 DCAF4Q8WV16 495 aa16.87■□□□□ 0.29
LRIF1-202ENST00000485275 ZSCAN22P10073 491 aaPredicted RBP16.86■□□□□ 0.29
LRIF1-202ENST00000485275 MAP3K9P80192 1104 aa16.86■□□□□ 0.29
LRIF1-202ENST00000485275 TRIM22Q8IYM9 498 aa16.86■□□□□ 0.29
LRIF1-202ENST00000485275 RIOX1Q9H6W3 641 aa16.86■□□□□ 0.29
LRIF1-202ENST00000485275 MYH15Q9Y2K3 1946 aa16.86■□□□□ 0.29
LRIF1-202ENST00000485275 PDCP20941 246 aa16.85■□□□□ 0.29
LRIF1-202ENST00000485275 GNAQP50148 359 aa16.85■□□□□ 0.29
LRIF1-202ENST00000485275 SPP2Q13103 211 aa16.85■□□□□ 0.29
LRIF1-202ENST00000485275 FAM83BQ5T0W9 1011 aa16.85■□□□□ 0.29
LRIF1-202ENST00000485275 GPATCH4Q5T3I0 446 aaKnown RBP16.85■□□□□ 0.29
LRIF1-202ENST00000485275 TYW1BQ6NUM6 668 aa16.85■□□□□ 0.29
LRIF1-202ENST00000485275 FERMT3Q86UX7 667 aa16.85■□□□□ 0.29
LRIF1-202ENST00000485275 FBXO18Q8NFZ0 1043 aa16.85■□□□□ 0.29
LRIF1-202ENST00000485275 WDR18Q9BV38 432 aa16.85■□□□□ 0.29
LRIF1-202ENST00000485275 WDR33Q9C0J8 1336 aaKnown RBP16.85■□□□□ 0.29
LRIF1-202ENST00000485275 KIAA1683Q9H0B3 1180 aa16.85■□□□□ 0.29
LRIF1-202ENST00000485275 ZNF408Q9H9D4 720 aa16.85■□□□□ 0.29
LRIF1-202ENST00000485275 PICK1Q9NRD5 415 aa16.85■□□□□ 0.29
LRIF1-202ENST00000485275 ZHX2Q9Y6X8 837 aa16.85■□□□□ 0.29
LRIF1-202ENST00000485275 ITGBL1O95965 494 aaPredicted RBP16.84■□□□□ 0.29
LRIF1-202ENST00000485275 GPKOWQ92917 476 aaPredicted RBP eCLIP16.84■□□□□ 0.29
LRIF1-202ENST00000485275 C8orf76Q96K31 380 aa16.84■□□□□ 0.29
LRIF1-202ENST00000485275 PIGSQ96S52 555 aa16.84■□□□□ 0.29
LRIF1-202ENST00000485275 FEZ1Q99689 392 aa16.84■□□□□ 0.29
LRIF1-202ENST00000485275 JMJD4Q9H9V9 463 aa16.84■□□□□ 0.29
LRIF1-202ENST00000485275 GOPCQ9HD26 462 aa16.84■□□□□ 0.29
LRIF1-202ENST00000485275 EMILIN3Q9NT22 766 aa16.84■□□□□ 0.29
LRIF1-202ENST00000485275 VPS54Q9P1Q0 977 aa16.84■□□□□ 0.29
LRIF1-202ENST00000485275 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.84■□□□□ 0.29
LRIF1-202ENST00000485275 RLFQ13129 1914 aa16.84■□□□□ 0.29
LRIF1-202ENST00000485275 LOC285556D6RIA3 1793 aa16.84■□□□□ 0.29
LRIF1-202ENST00000485275 TRIM75PA6NK02 468 aa16.84■□□□□ 0.29
LRIF1-202ENST00000485275 ADAMTS3O15072 1205 aa16.84■□□□□ 0.29
LRIF1-202ENST00000485275 F13A1P00488 732 aa16.84■□□□□ 0.29
LRIF1-202ENST00000485275 BMP3P12645 472 aa16.84■□□□□ 0.29
LRIF1-202ENST00000485275 NF2P35240 595 aa16.84■□□□□ 0.29
LRIF1-202ENST00000485275 IREB2P48200 963 aaKnown RBP16.84■□□□□ 0.29
LRIF1-202ENST00000485275 PFKFB3Q16875 520 aaPredicted RBP16.84■□□□□ 0.29
LRIF1-202ENST00000485275 HOMER1Q86YM7 354 aa16.84■□□□□ 0.29
LRIF1-202ENST00000485275 ADGRF4Q8IZF3 695 aa16.84■□□□□ 0.29
LRIF1-202ENST00000485275 ZNF280CQ8ND82 737 aa16.84■□□□□ 0.29
LRIF1-202ENST00000485275 LZTS2Q9BRK4 669 aa16.84■□□□□ 0.29
LRIF1-202ENST00000485275 ELP3Q9H9T3 547 aa16.84■□□□□ 0.29
LRIF1-202ENST00000485275 AFG3L2Q9Y4W6 797 aa16.84■□□□□ 0.29
LRIF1-202ENST00000485275 TRPM7Q96QT4 1865 aa16.83■□□□□ 0.29
LRIF1-202ENST00000485275 KIF28PB7ZC32 967 aa16.83■□□□□ 0.28
LRIF1-202ENST00000485275 USP17L10C9JJH3 530 aa16.83■□□□□ 0.28
LRIF1-202ENST00000485275 PPP1R11O60927 126 aaPredicted RBP16.83■□□□□ 0.28
LRIF1-202ENST00000485275 SCG2P13521 617 aa16.83■□□□□ 0.28
LRIF1-202ENST00000485275 SMARCA1P28370 1054 aa16.83■□□□□ 0.28
LRIF1-202ENST00000485275 BACE1P56817 501 aa16.83■□□□□ 0.28
LRIF1-202ENST00000485275 RESTQ13127 1097 aa16.83■□□□□ 0.28
LRIF1-202ENST00000485275 TTLL12Q14166 644 aaPredicted RBP16.83■□□□□ 0.28
LRIF1-202ENST00000485275 NPY5RQ15761 445 aa16.83■□□□□ 0.28
LRIF1-202ENST00000485275 KRT40Q6A162 431 aa16.83■□□□□ 0.28
LRIF1-202ENST00000485275 MTMR8Q96EF0 704 aa16.83■□□□□ 0.28
LRIF1-202ENST00000485275 SH2D4AQ9H788 454 aa16.83■□□□□ 0.28
LRIF1-202ENST00000485275 VAT1LQ9HCJ6 419 aa16.83■□□□□ 0.28
LRIF1-202ENST00000485275 KCNJ14Q9UNX9 436 aa16.83■□□□□ 0.28
LRIF1-202ENST00000485275 KIF3AQ9Y496 699 aa16.83■□□□□ 0.28
LRIF1-202ENST00000485275 TMEM232C9JQI7 657 aa16.82■□□□□ 0.28
LRIF1-202ENST00000485275 LDLRAD1Q5T700 205 aa16.82■□□□□ 0.28
LRIF1-202ENST00000485275 WWC2Q6AWC2 1192 aa16.82■□□□□ 0.28
LRIF1-202ENST00000485275 FAM173BQ6P4H8 233 aa16.82■□□□□ 0.28
LRIF1-202ENST00000485275 ANKRD13AQ8IZ07 590 aa16.82■□□□□ 0.28
LRIF1-202ENST00000485275 FBXO28Q9NVF7 368 aa16.82■□□□□ 0.28
LRIF1-202ENST00000485275 ISY1Q9ULR0 285 aaKnown RBP16.82■□□□□ 0.28
LRIF1-202ENST00000485275 CSADQ9Y600 493 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms