RNA–Protein interactions for RNA: ENST00000485180.1

USP9X-207, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-207ENST00000485180 ZNF281Q9Y2X9 895 aa12.77□□□□□ -0.37
USP9X-207ENST00000485180 UNCXA6NJT0 531 aa12.76□□□□□ -0.37
USP9X-207ENST00000485180 PAK2Q13177 524 aa12.76□□□□□ -0.37
USP9X-207ENST00000485180 RNF111Q6ZNA4 994 aa12.76□□□□□ -0.37
USP9X-207ENST00000485180 USHBP1Q8N6Y0 703 aa12.76□□□□□ -0.37
USP9X-207ENST00000485180 ZNF655Q8N720 491 aaPredicted RBP12.76□□□□□ -0.37
USP9X-207ENST00000485180 TCTN2Q96GX1 697 aa12.76□□□□□ -0.37
USP9X-207ENST00000485180 PRDM14Q9GZV8 571 aa12.76□□□□□ -0.37
USP9X-207ENST00000485180 MKRN2Q9H000 416 aaKnown RBP12.76□□□□□ -0.37
USP9X-207ENST00000485180 SIGLEC6O43699 453 aa12.75□□□□□ -0.37
USP9X-207ENST00000485180 HDLBPQ00341 1268 aaKnown RBP12.75□□□□□ -0.37
USP9X-207ENST00000485180 OXR1Q8N573 874 aa12.75□□□□□ -0.37
USP9X-207ENST00000485180 RBBP8NLQ8NC74 664 aaPredicted RBP12.75□□□□□ -0.37
USP9X-207ENST00000485180 PPT2Q9UMR5 302 aa12.75□□□□□ -0.37
USP9X-207ENST00000485180 FITM1A5D6W6 292 aa12.74□□□□□ -0.37
USP9X-207ENST00000485180 PRAMEF1O95521 474 aa12.74□□□□□ -0.37
USP9X-207ENST00000485180 PRR23BQ6ZRT6 265 aa12.74□□□□□ -0.37
USP9X-207ENST00000485180 FAM84AQ96KN4 292 aa12.74□□□□□ -0.37
USP9X-207ENST00000485180 TM9SF2Q99805 663 aa12.74□□□□□ -0.37
USP9X-207ENST00000485180 SUCOQ9UBS9 1254 aaKnown RBP12.74□□□□□ -0.37
USP9X-207ENST00000485180 TRHRP34981 398 aaPredicted RBP12.73□□□□□ -0.37
USP9X-207ENST00000485180 DUSP4Q13115 394 aa12.73□□□□□ -0.37
USP9X-207ENST00000485180 COL9A2Q14055 689 aaPredicted RBP12.73□□□□□ -0.37
USP9X-207ENST00000485180 NR0B2Q15466 257 aa12.73□□□□□ -0.37
USP9X-207ENST00000485180 LILRA2Q8N149 483 aa12.73□□□□□ -0.37
USP9X-207ENST00000485180 FOXP3Q9BZS1 431 aa12.73□□□□□ -0.37
USP9X-207ENST00000485180 EBF1Q9UH73 591 aa12.73□□□□□ -0.37
USP9X-207ENST00000485180 NT5DC4Q86YG4 428 aa12.72□□□□□ -0.37
USP9X-207ENST00000485180 LINC01599Q8WXQ3 324 aa12.72□□□□□ -0.37
USP9X-207ENST00000485180 DHRS1Q96LJ7 313 aa12.72□□□□□ -0.37
USP9X-207ENST00000485180 SPATA32Q96LK8 384 aa12.72□□□□□ -0.37
USP9X-207ENST00000485180 G6PC3Q9BUM1 346 aa12.72□□□□□ -0.37
USP9X-207ENST00000485180 TCFL5Q9UL49 500 aa12.72□□□□□ -0.37
USP9X-207ENST00000485180 PCDHB12Q9Y5F1 795 aa12.72□□□□□ -0.37
USP9X-207ENST00000485180 FAM86C2PA6NEL3 165 aa12.71□□□□□ -0.37
USP9X-207ENST00000485180 PCBP3P57721 371 aaKnown RBP12.71□□□□□ -0.37
USP9X-207ENST00000485180 CHRNEQ04844 493 aa12.71□□□□□ -0.37
USP9X-207ENST00000485180 FBXW10Q5XX13 1052 aa12.71□□□□□ -0.37
USP9X-207ENST00000485180 KSR1Q8IVT5 923 aa12.71□□□□□ -0.37
USP9X-207ENST00000485180 ANKS4BQ8N8V4 417 aa12.71□□□□□ -0.37
USP9X-207ENST00000485180 LINC00116Q8NCU8 138 aa12.71□□□□□ -0.37
USP9X-207ENST00000485180 RASGRP4Q8TDF6 673 aa12.71□□□□□ -0.37
USP9X-207ENST00000485180 SLC38A3Q99624 504 aa12.71□□□□□ -0.37
USP9X-207ENST00000485180 C19orf44Q9H6X5 657 aa12.71□□□□□ -0.37
USP9X-207ENST00000485180 GINM1Q9NU53 330 aa12.71□□□□□ -0.37
USP9X-207ENST00000485180 AUHQ13825 339 aaKnown RBP12.7□□□□□ -0.38
USP9X-207ENST00000485180 TIGD5Q53EQ6 642 aa12.7□□□□□ -0.38
USP9X-207ENST00000485180 LSRQ86X29 649 aaPredicted RBP12.7□□□□□ -0.38
USP9X-207ENST00000485180 RNF32Q9H0A6 362 aa12.7□□□□□ -0.38
USP9X-207ENST00000485180 CHST7Q9NS84 486 aa12.7□□□□□ -0.38
USP9X-207ENST00000485180 MINPP1Q9UNW1 487 aa12.7□□□□□ -0.38
USP9X-207ENST00000485180 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.7□□□□□ -0.38
USP9X-207ENST00000485180 RPL10P27635 214 aaKnown RBP12.69□□□□□ -0.38
USP9X-207ENST00000485180 SOX9P48436 509 aa12.69□□□□□ -0.38
USP9X-207ENST00000485180 BBS9Q3SYG4 887 aa12.69□□□□□ -0.38
USP9X-207ENST00000485180 SPPL2CQ8IUH8 684 aa12.69□□□□□ -0.38
USP9X-207ENST00000485180 BHLHE22Q8NFJ8 381 aaPredicted RBP12.69□□□□□ -0.38
USP9X-207ENST00000485180 GPRASP2Q96D09 838 aa12.69□□□□□ -0.38
USP9X-207ENST00000485180 GFOD1Q9NXC2 390 aa12.69□□□□□ -0.38
USP9X-207ENST00000485180 PRR13Q9NZ81 148 aa12.69□□□□□ -0.38
USP9X-207ENST00000485180 FBXL21Q9UKT6 434 aa12.69□□□□□ -0.38
USP9X-207ENST00000485180 TMEM82A0PJX8 343 aa12.68□□□□□ -0.38
USP9X-207ENST00000485180 C9IYK1 514 aa12.68□□□□□ -0.38
USP9X-207ENST00000485180 GUCY2CP25092 1073 aa12.68□□□□□ -0.38
USP9X-207ENST00000485180 PMS1P54277 932 aaKnown RBP12.68□□□□□ -0.38
USP9X-207ENST00000485180 ZNF124Q15973 351 aa12.68□□□□□ -0.38
USP9X-207ENST00000485180 C9orf131Q5VYM1 1079 aa12.68□□□□□ -0.38
USP9X-207ENST00000485180 NSUN3Q9H649 340 aaKnown RBP12.68□□□□□ -0.38
USP9X-207ENST00000485180 SSU72P8A0A1W2PR75 194 aa12.67□□□□□ -0.38
USP9X-207ENST00000485180 SHOXO15266 292 aa12.67□□□□□ -0.38
USP9X-207ENST00000485180 SYPP08247 313 aa12.67□□□□□ -0.38
USP9X-207ENST00000485180 CCDC81Q6ZN84 652 aa12.67□□□□□ -0.38
USP9X-207ENST00000485180 RUFY4Q6ZNE9 571 aa12.67□□□□□ -0.38
USP9X-207ENST00000485180 WAPLQ7Z5K2 1190 aa12.67□□□□□ -0.38
USP9X-207ENST00000485180 PPFIBP1Q86W92 1011 aa12.67□□□□□ -0.38
USP9X-207ENST00000485180 SMARCC1Q92922 1105 aaPredicted RBP12.67□□□□□ -0.38
USP9X-207ENST00000485180 DIRC2Q96SL1 478 aa12.67□□□□□ -0.38
USP9X-207ENST00000485180 EFR3BQ9Y2G0 817 aa12.67□□□□□ -0.38
USP9X-207ENST00000485180 GJA8P48165 433 aa12.66□□□□□ -0.38
USP9X-207ENST00000485180 ZYXQ15942 572 aaKnown RBP12.66□□□□□ -0.38
USP9X-207ENST00000485180 PKN1Q16512 942 aa12.66□□□□□ -0.38
USP9X-207ENST00000485180 UNC5AQ6ZN44 842 aa12.66□□□□□ -0.38
USP9X-207ENST00000485180 C7orf61Q8IZ16 206 aa12.66□□□□□ -0.38
USP9X-207ENST00000485180 CWC22Q9HCG8 908 aaKnown RBP12.66□□□□□ -0.38
USP9X-207ENST00000485180 JAG1P78504 1218 aa12.65□□□□□ -0.38
USP9X-207ENST00000485180 CCDC144CPQ8IYA2 1237 aa12.65□□□□□ -0.38
USP9X-207ENST00000485180 ZMYM5Q9UJ78 669 aa12.65□□□□□ -0.38
USP9X-207ENST00000485180 MEIS1O00470 390 aa12.64□□□□□ -0.39
USP9X-207ENST00000485180 FKTNO75072 461 aa12.64□□□□□ -0.39
USP9X-207ENST00000485180 CTSKP43235 329 aa12.64□□□□□ -0.39
USP9X-207ENST00000485180 TDRD10Q5VZ19 366 aaKnown RBP12.64□□□□□ -0.39
USP9X-207ENST00000485180 FBXO15Q8NCQ5 510 aaPredicted RBP12.64□□□□□ -0.39
USP9X-207ENST00000485180 MAP6Q96JE9 813 aa12.64□□□□□ -0.39
USP9X-207ENST00000485180 EPB41L4BQ9H329 900 aa12.64□□□□□ -0.39
USP9X-207ENST00000485180 KIR2DL1P43626 348 aaPredicted RBP12.63□□□□□ -0.39
USP9X-207ENST00000485180 KIR2DL2P43627 348 aaPredicted RBP12.63□□□□□ -0.39
USP9X-207ENST00000485180 SNX17Q15036 470 aa12.63□□□□□ -0.39
USP9X-207ENST00000485180 GPR160Q9UJ42 338 aa12.63□□□□□ -0.39
USP9X-207ENST00000485180 NOTOA8MTQ0 251 aa12.62□□□□□ -0.39
USP9X-207ENST00000485180 USP2O75604 605 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms