RNA–Protein interactions for RNA: ENST00000485140.1

VPS50-217, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-217ENST00000485140 TAB3Q8N5C8 712 aaPredicted RBP6.03□□□□□ -1.44
VPS50-217ENST00000485140 LINC00116Q8NCU8 138 aa6.03□□□□□ -1.44
VPS50-217ENST00000485140 VWCEQ96DN2 955 aa6.03□□□□□ -1.44
VPS50-217ENST00000485140 SPON2Q9BUD6 331 aa6.03□□□□□ -1.44
VPS50-217ENST00000485140 TCAF2A6NFQ2 919 aa6.02□□□□□ -1.45
VPS50-217ENST00000485140 TNFRSF10CO14798 259 aa6.02□□□□□ -1.45
VPS50-217ENST00000485140 MED14OSP0DP75 135 aa6.02□□□□□ -1.45
VPS50-217ENST00000485140 VAMP1P23763 118 aa6.02□□□□□ -1.45
VPS50-217ENST00000485140 MCM4P33991 863 aa6.02□□□□□ -1.45
VPS50-217ENST00000485140 TMEM62Q0P6H9 643 aa6.02□□□□□ -1.45
VPS50-217ENST00000485140 NBPF9Q3BBW0 867 aa6.02□□□□□ -1.45
VPS50-217ENST00000485140 NBPF12Q5TAG4 269 aaPredicted RBP6.02□□□□□ -1.45
VPS50-217ENST00000485140 OVOS1Q6IE37 1185 aa6.02□□□□□ -1.45
VPS50-217ENST00000485140 CRTAC1Q9NQ79 661 aa6.02□□□□□ -1.45
VPS50-217ENST00000485140 YBX2Q9Y2T7 364 aaKnown RBP6.02□□□□□ -1.45
VPS50-217ENST00000485140 F6X3S4 739 aa6.01□□□□□ -1.45
VPS50-217ENST00000485140 ABLIM1O14639 778 aa6.01□□□□□ -1.45
VPS50-217ENST00000485140 UBOX5O94941 541 aa6.01□□□□□ -1.45
VPS50-217ENST00000485140 ZNF16P17020 682 aaPredicted RBP6.01□□□□□ -1.45
VPS50-217ENST00000485140 TEKQ02763 1124 aa6.01□□□□□ -1.45
VPS50-217ENST00000485140 BBS9Q3SYG4 887 aa6.01□□□□□ -1.45
VPS50-217ENST00000485140 SEZ6Q53EL9 994 aa6.01□□□□□ -1.45
VPS50-217ENST00000485140 LCE4AQ5TA78 99 aa6.01□□□□□ -1.45
VPS50-217ENST00000485140 PRR23BQ6ZRT6 265 aa6.01□□□□□ -1.45
VPS50-217ENST00000485140 FBXO27Q8NI29 283 aa6.01□□□□□ -1.45
VPS50-217ENST00000485140 ATG4CQ96DT6 458 aa6.01□□□□□ -1.45
VPS50-217ENST00000485140 HDAC8Q9BY41 377 aa6.01□□□□□ -1.45
VPS50-217ENST00000485140 KRTAP17-1Q9BYP8 105 aa6.01□□□□□ -1.45
VPS50-217ENST00000485140 KRTAP4-11Q9BYQ6 195 aa6.01□□□□□ -1.45
VPS50-217ENST00000485140 ZNF281Q9Y2X9 895 aa6.01□□□□□ -1.45
VPS50-217ENST00000485140 SLC12A7Q9Y666 1083 aa6.01□□□□□ -1.45
VPS50-217ENST00000485140 SIGLEC6O43699 453 aa6□□□□□ -1.45
VPS50-217ENST00000485140 NME1P15531 152 aaKnown RBP6□□□□□ -1.45
VPS50-217ENST00000485140 TAGLNQ01995 201 aaKnown RBP6□□□□□ -1.45
VPS50-217ENST00000485140 SLC14A2Q15849 920 aa6□□□□□ -1.45
VPS50-217ENST00000485140 LINC01599Q8WXQ3 324 aa6□□□□□ -1.45
VPS50-217ENST00000485140 DIRC2Q96SL1 478 aa6□□□□□ -1.45
VPS50-217ENST00000485140 TM9SF2Q99805 663 aa6□□□□□ -1.45
VPS50-217ENST00000485140 COPRSQ9NQ92 184 aa6□□□□□ -1.45
VPS50-217ENST00000485140 TNFRSF10DQ9UBN6 386 aa6□□□□□ -1.45
VPS50-217ENST00000485140 ADAMTS1Q9UHI8 967 aa6□□□□□ -1.45
VPS50-217ENST00000485140 ZMYM5Q9UJ78 669 aa6□□□□□ -1.45
VPS50-217ENST00000485140 PCDHB12Q9Y5F1 795 aa6□□□□□ -1.45
VPS50-217ENST00000485140 ARL4AP40617 200 aa5.99□□□□□ -1.45
VPS50-217ENST00000485140 ZNF124Q15973 351 aa5.99□□□□□ -1.45
VPS50-217ENST00000485140 CIAPIN1Q6FI81 312 aa5.99□□□□□ -1.45
VPS50-217ENST00000485140 GK5Q6ZS86 529 aa5.99□□□□□ -1.45
VPS50-217ENST00000485140 USP48Q86UV5 1035 aa5.99□□□□□ -1.45
VPS50-217ENST00000485140 RNF34Q969K3 372 aa5.99□□□□□ -1.45
VPS50-217ENST00000485140 INTS4Q96HW7 963 aaKnown RBP5.99□□□□□ -1.45
VPS50-217ENST00000485140 MAP6Q96JE9 813 aa5.99□□□□□ -1.45
VPS50-217ENST00000485140 FCRL2Q96LA5 508 aaPredicted RBP5.99□□□□□ -1.45
VPS50-217ENST00000485140 MKRN2Q9H000 416 aaKnown RBP5.99□□□□□ -1.45
VPS50-217ENST00000485140 RNF32Q9H0A6 362 aa5.99□□□□□ -1.45
VPS50-217ENST00000485140 UBP1Q9NZI7 540 aa5.99□□□□□ -1.45
VPS50-217ENST00000485140 RAPGEFL1Q9UHV5 662 aa5.99□□□□□ -1.45
VPS50-217ENST00000485140 TCFL5Q9UL49 500 aa5.99□□□□□ -1.45
VPS50-217ENST00000485140 ZNRF3Q9ULT6 936 aa5.99□□□□□ -1.45
VPS50-217ENST00000485140 OR14I1A6ND48 311 aa5.98□□□□□ -1.45
VPS50-217ENST00000485140 SCAMP3O14828 347 aaKnown RBP5.98□□□□□ -1.45
VPS50-217ENST00000485140 GSNP06396 782 aa5.98□□□□□ -1.45
VPS50-217ENST00000485140 BMP8BP34820 402 aa5.98□□□□□ -1.45
VPS50-217ENST00000485140 LAPTM5Q13571 262 aa5.98□□□□□ -1.45
VPS50-217ENST00000485140 GALNT18Q6P9A2 607 aa5.98□□□□□ -1.45
VPS50-217ENST00000485140 TCTN2Q96GX1 697 aa5.98□□□□□ -1.45
VPS50-217ENST00000485140 FERD3LQ96RJ6 166 aa5.98□□□□□ -1.45
VPS50-217ENST00000485140 CHST7Q9NS84 486 aa5.98□□□□□ -1.45
VPS50-217ENST00000485140 GPR160Q9UJ42 338 aa5.98□□□□□ -1.45
VPS50-217ENST00000485140 WTIPA6NIX2 430 aaPredicted RBP5.97□□□□□ -1.45
VPS50-217ENST00000485140 RFXAPO00287 272 aa5.97□□□□□ -1.45
VPS50-217ENST00000485140 NRDCO43847 1150 aa5.97□□□□□ -1.45
VPS50-217ENST00000485140 DNAJA2O60884 412 aa5.97□□□□□ -1.45
VPS50-217ENST00000485140 LRRN2O75325 713 aa5.97□□□□□ -1.45
VPS50-217ENST00000485140 RPL10P27635 214 aaKnown RBP5.97□□□□□ -1.45
VPS50-217ENST00000485140 CRKP46108 304 aa5.97□□□□□ -1.45
VPS50-217ENST00000485140 KCNA10Q16322 511 aa5.97□□□□□ -1.45
VPS50-217ENST00000485140 FBLN7Q53RD9 439 aa5.97□□□□□ -1.45
VPS50-217ENST00000485140 CWF19L1Q69YN2 538 aaKnown RBP5.97□□□□□ -1.45
VPS50-217ENST00000485140 WAPLQ7Z5K2 1190 aa5.97□□□□□ -1.45
VPS50-217ENST00000485140 TMEM151BQ8IW70 566 aa5.97□□□□□ -1.45
VPS50-217ENST00000485140 LRRC56Q8IYG6 542 aaPredicted RBP5.97□□□□□ -1.45
VPS50-217ENST00000485140 RBBP8NLQ8NC74 664 aaPredicted RBP5.97□□□□□ -1.45
VPS50-217ENST00000485140 OR6P1Q8NGX9 317 aa5.97□□□□□ -1.45
VPS50-217ENST00000485140 KCNN1Q92952 543 aa5.97□□□□□ -1.45
VPS50-217ENST00000485140 SUCOQ9UBS9 1254 aaKnown RBP5.97□□□□□ -1.45
VPS50-217ENST00000485140 TEX51A0A1B0GUA7 166 aa5.96□□□□□ -1.46
VPS50-217ENST00000485140 PNLIPP16233 465 aa5.96□□□□□ -1.46
VPS50-217ENST00000485140 PDE6BP35913 854 aa5.96□□□□□ -1.46
VPS50-217ENST00000485140 NOP2P46087 812 aaKnown RBP5.96□□□□□ -1.46
VPS50-217ENST00000485140 PMS1P54277 932 aaKnown RBP5.96□□□□□ -1.46
VPS50-217ENST00000485140 CLCQ05315 142 aa5.96□□□□□ -1.46
VPS50-217ENST00000485140 AMIGO3Q86WK7 504 aa5.96□□□□□ -1.46
VPS50-217ENST00000485140 ZNF654Q8IZM8 581 aa5.96□□□□□ -1.46
VPS50-217ENST00000485140 USHBP1Q8N6Y0 703 aa5.96□□□□□ -1.46
VPS50-217ENST00000485140 RGS22Q8NE09 1264 aa5.96□□□□□ -1.46
VPS50-217ENST00000485140 SLC6A18Q96N87 628 aa5.96□□□□□ -1.46
VPS50-217ENST00000485140 CRBNQ96SW2 442 aa5.96□□□□□ -1.46
VPS50-217ENST00000485140 ZNF552Q9H707 407 aaPredicted RBP5.96□□□□□ -1.46
VPS50-217ENST00000485140 CD320Q9NPF0 282 aa5.96□□□□□ -1.46
VPS50-217ENST00000485140 FBXL21Q9UKT6 434 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms