RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 NBPF9Q3BBW0 867 aa7.99□□□□□ -1.13
SCAF11-207ENST00000484275 SIAH1Q8IUQ4 282 aa7.99□□□□□ -1.13
SCAF11-207ENST00000484275 SLC6A17Q9H1V8 727 aa7.99□□□□□ -1.13
SCAF11-207ENST00000484275 EHMT1Q9H9B1 1298 aa7.99□□□□□ -1.13
SCAF11-207ENST00000484275 CWC22Q9HCG8 908 aaKnown RBP7.99□□□□□ -1.13
SCAF11-207ENST00000484275 UBP1Q9NZI7 540 aa7.99□□□□□ -1.13
SCAF11-207ENST00000484275 GPR160Q9UJ42 338 aa7.99□□□□□ -1.13
SCAF11-207ENST00000484275 TCAF2A6NFQ2 919 aa7.98□□□□□ -1.13
SCAF11-207ENST00000484275 CLCQ05315 142 aa7.98□□□□□ -1.13
SCAF11-207ENST00000484275 DUSP4Q13115 394 aa7.98□□□□□ -1.13
SCAF11-207ENST00000484275 CDCP2Q5VXM1 449 aa7.98□□□□□ -1.13
SCAF11-207ENST00000484275 ZNF605Q86T29 641 aa7.98□□□□□ -1.13
SCAF11-207ENST00000484275 ANKS4BQ8N8V4 417 aa7.98□□□□□ -1.13
SCAF11-207ENST00000484275 ENOX1Q8TC92 643 aaKnown RBP7.98□□□□□ -1.13
SCAF11-207ENST00000484275 ATG4CQ96DT6 458 aa7.98□□□□□ -1.13
SCAF11-207ENST00000484275 TCTN2Q96GX1 697 aa7.98□□□□□ -1.13
SCAF11-207ENST00000484275 FOXP3Q9BZS1 431 aa7.98□□□□□ -1.13
SCAF11-207ENST00000484275 ANTXR1Q9H6X2 564 aa7.98□□□□□ -1.13
SCAF11-207ENST00000484275 CNNM2Q9H8M5 875 aa7.98□□□□□ -1.13
SCAF11-207ENST00000484275 GGT7Q9UJ14 662 aa7.98□□□□□ -1.13
SCAF11-207ENST00000484275 MINPP1Q9UNW1 487 aa7.98□□□□□ -1.13
SCAF11-207ENST00000484275 TMEM82A0PJX8 343 aa7.97□□□□□ -1.13
SCAF11-207ENST00000484275 RPL10P27635 214 aaKnown RBP7.97□□□□□ -1.13
SCAF11-207ENST00000484275 RNF4P78317 190 aa7.97□□□□□ -1.13
SCAF11-207ENST00000484275 CHRNEQ04844 493 aa7.97□□□□□ -1.13
SCAF11-207ENST00000484275 MLECQ14165 292 aa7.97□□□□□ -1.13
SCAF11-207ENST00000484275 ZPBP2Q6X784 338 aa7.97□□□□□ -1.13
SCAF11-207ENST00000484275 AMIGO3Q86WK7 504 aa7.97□□□□□ -1.13
SCAF11-207ENST00000484275 SPPL2CQ8IUH8 684 aa7.97□□□□□ -1.13
SCAF11-207ENST00000484275 DAGLBQ8NCG7 672 aa7.97□□□□□ -1.13
SCAF11-207ENST00000484275 GIPC2Q8TF65 315 aa7.97□□□□□ -1.13
SCAF11-207ENST00000484275 ZNF512BQ96KM6 892 aaPredicted RBP7.97□□□□□ -1.13
SCAF11-207ENST00000484275 BCL2L13Q9BXK5 485 aa7.97□□□□□ -1.13
SCAF11-207ENST00000484275 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.97□□□□□ -1.13
SCAF11-207ENST00000484275 USP2O75604 605 aaPredicted RBP7.96□□□□□ -1.14
SCAF11-207ENST00000484275 LINC00310P59036 64 aa7.96□□□□□ -1.14
SCAF11-207ENST00000484275 SEZ6Q53EL9 994 aa7.96□□□□□ -1.14
SCAF11-207ENST00000484275 LDLRAD1Q5T700 205 aa7.96□□□□□ -1.14
SCAF11-207ENST00000484275 RNF111Q6ZNA4 994 aa7.96□□□□□ -1.14
SCAF11-207ENST00000484275 GK5Q6ZS86 529 aa7.96□□□□□ -1.14
SCAF11-207ENST00000484275 SIRT2Q8IXJ6 389 aa7.96□□□□□ -1.14
SCAF11-207ENST00000484275 SYTL4Q96C24 671 aaPredicted RBP7.96□□□□□ -1.14
SCAF11-207ENST00000484275 ASCC2Q9H1I8 757 aaPredicted RBP7.96□□□□□ -1.14
SCAF11-207ENST00000484275 ZNF552Q9H707 407 aaPredicted RBP7.96□□□□□ -1.14
SCAF11-207ENST00000484275 PRAMEF1O95521 474 aa7.95□□□□□ -1.14
SCAF11-207ENST00000484275 CHMP4BP1P59074 171 aa7.95□□□□□ -1.14
SCAF11-207ENST00000484275 DLG4P78352 724 aa7.95□□□□□ -1.14
SCAF11-207ENST00000484275 SNX17Q15036 470 aa7.95□□□□□ -1.14
SCAF11-207ENST00000484275 BBS9Q3SYG4 887 aa7.95□□□□□ -1.14
SCAF11-207ENST00000484275 WAPLQ7Z5K2 1190 aa7.95□□□□□ -1.14
SCAF11-207ENST00000484275 NLRX1Q86UT6 975 aa7.95□□□□□ -1.14
SCAF11-207ENST00000484275 ZNF655Q8N720 491 aaPredicted RBP7.95□□□□□ -1.14
SCAF11-207ENST00000484275 GCM1Q9NP62 436 aa7.95□□□□□ -1.14
SCAF11-207ENST00000484275 TCFL5Q9UL49 500 aa7.95□□□□□ -1.14
SCAF11-207ENST00000484275 PEX10O60683 326 aa7.94□□□□□ -1.14
SCAF11-207ENST00000484275 ITGAEP38570 1179 aa7.94□□□□□ -1.14
SCAF11-207ENST00000484275 HS2ST1Q7LGA3 356 aa7.94□□□□□ -1.14
SCAF11-207ENST00000484275 NLRC3Q7RTR2 1065 aa7.94□□□□□ -1.14
SCAF11-207ENST00000484275 TMEM192Q8IY95 271 aa7.94□□□□□ -1.14
SCAF11-207ENST00000484275 LINC00116Q8NCU8 138 aa7.94□□□□□ -1.14
SCAF11-207ENST00000484275 MAP6Q96JE9 813 aa7.94□□□□□ -1.14
SCAF11-207ENST00000484275 HHIPL1Q96JK4 782 aa7.94□□□□□ -1.14
SCAF11-207ENST00000484275 SGPP1Q9BX95 441 aa7.94□□□□□ -1.14
SCAF11-207ENST00000484275 PRDM14Q9GZV8 571 aa7.94□□□□□ -1.14
SCAF11-207ENST00000484275 FKTNO75072 461 aa7.93□□□□□ -1.14
SCAF11-207ENST00000484275 PDE6BP35913 854 aa7.93□□□□□ -1.14
SCAF11-207ENST00000484275 APOBRQ0VD83 1088 aa7.93□□□□□ -1.14
SCAF11-207ENST00000484275 CIAPIN1Q6FI81 312 aa7.93□□□□□ -1.14
SCAF11-207ENST00000484275 REXO1Q8N1G1 1221 aaKnown RBP7.93□□□□□ -1.14
SCAF11-207ENST00000484275 ZMYM5Q9UJ78 669 aa7.93□□□□□ -1.14
SCAF11-207ENST00000484275 SIGLEC6O43699 453 aa7.92□□□□□ -1.14
SCAF11-207ENST00000484275 NUAK1O60285 661 aa7.92□□□□□ -1.14
SCAF11-207ENST00000484275 SYPP08247 313 aa7.92□□□□□ -1.14
SCAF11-207ENST00000484275 NME1P15531 152 aaKnown RBP7.92□□□□□ -1.14
SCAF11-207ENST00000484275 PCBP3P57721 371 aaKnown RBP7.92□□□□□ -1.14
SCAF11-207ENST00000484275 TTLL10Q6ZVT0 673 aa7.92□□□□□ -1.14
SCAF11-207ENST00000484275 EAF1Q96JC9 268 aaPredicted RBP7.92□□□□□ -1.14
SCAF11-207ENST00000484275 IRF2BPLQ9H1B7 796 aa7.92□□□□□ -1.14
SCAF11-207ENST00000484275 TEX51A0A1B0GUA7 166 aa7.91□□□□□ -1.14
SCAF11-207ENST00000484275 MEIS3P2A8K0S8 358 aa7.91□□□□□ -1.14
SCAF11-207ENST00000484275 NRDCO43847 1150 aa7.91□□□□□ -1.14
SCAF11-207ENST00000484275 SEMA7AO75326 666 aa7.91□□□□□ -1.14
SCAF11-207ENST00000484275 CLEC3AO75596 197 aa7.91□□□□□ -1.14
SCAF11-207ENST00000484275 MCM4P33991 863 aa7.91□□□□□ -1.14
SCAF11-207ENST00000484275 KIR2DL1P43626 348 aaPredicted RBP7.91□□□□□ -1.14
SCAF11-207ENST00000484275 KIR2DL2P43627 348 aaPredicted RBP7.91□□□□□ -1.14
SCAF11-207ENST00000484275 RAD51AP2Q09MP3 1159 aa7.91□□□□□ -1.14
SCAF11-207ENST00000484275 ZNF326Q5BKZ1 582 aaKnown RBP7.91□□□□□ -1.14
SCAF11-207ENST00000484275 CEP128Q6ZU80 1094 aa7.91□□□□□ -1.14
SCAF11-207ENST00000484275 SLITRK4Q8IW52 837 aa7.91□□□□□ -1.14
SCAF11-207ENST00000484275 PLCD4Q9BRC7 762 aa7.91□□□□□ -1.14
SCAF11-207ENST00000484275 TNFRSF10CO14798 259 aa7.9□□□□□ -1.14
SCAF11-207ENST00000484275 CTSKP43235 329 aa7.9□□□□□ -1.14
SCAF11-207ENST00000484275 CEBPAP49715 358 aaPredicted RBP7.9□□□□□ -1.14
SCAF11-207ENST00000484275 KIR3DS1Q14943 382 aa7.9□□□□□ -1.14
SCAF11-207ENST00000484275 ADGRF1Q5T601 910 aa7.9□□□□□ -1.14
SCAF11-207ENST00000484275 SLC6A18Q96N87 628 aa7.9□□□□□ -1.14
SCAF11-207ENST00000484275 NT5C1AQ9BXI3 368 aa7.9□□□□□ -1.14
SCAF11-207ENST00000484275 MEIS1O00470 390 aa7.89□□□□□ -1.15
SCAF11-207ENST00000484275 SDHBP21912 280 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms