RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 PDXDC2PQ6P474 469 aa22.24■■□□□ 1.15
RPUSD3-216ENST00000484134 SPATA5Q8NB90 893 aa22.24■■□□□ 1.15
RPUSD3-216ENST00000484134 PPM1EQ8WY54 764 aa22.24■■□□□ 1.15
RPUSD3-216ENST00000484134 ERICH2A1L162 156 aa22.23■■□□□ 1.15
RPUSD3-216ENST00000484134 ANKRD18BA2A2Z9 1011 aa22.23■■□□□ 1.15
RPUSD3-216ENST00000484134 ERVV-2B6SEH9 535 aa22.23■■□□□ 1.15
RPUSD3-216ENST00000484134 PDE2AO00408 941 aaPredicted RBP22.23■■□□□ 1.15
RPUSD3-216ENST00000484134 GTF2A1P52655 376 aaPredicted RBP22.23■■□□□ 1.15
RPUSD3-216ENST00000484134 FUT2Q10981 343 aa22.23■■□□□ 1.15
RPUSD3-216ENST00000484134 PTGDRQ13258 359 aa22.23■■□□□ 1.15
RPUSD3-216ENST00000484134 HLFQ16534 295 aa22.23■■□□□ 1.15
RPUSD3-216ENST00000484134 HINFPQ9BQA5 517 aa22.23■■□□□ 1.15
RPUSD3-216ENST00000484134 RNF26Q9BY78 433 aaPredicted RBP22.23■■□□□ 1.15
RPUSD3-216ENST00000484134 HAUS4Q9H6D7 363 aa22.23■■□□□ 1.15
RPUSD3-216ENST00000484134 GDAQ9Y2T3 454 aa22.23■■□□□ 1.15
RPUSD3-216ENST00000484134 TIAM2Q8IVF5 1701 aa22.23■■□□□ 1.15
RPUSD3-216ENST00000484134 RASGRF1Q13972 1273 aa22.23■■□□□ 1.15
RPUSD3-216ENST00000484134 OR8K1Q8NGG5 319 aa22.23■■□□□ 1.15
RPUSD3-216ENST00000484134 SLC4A4Q9Y6R1 1079 aa22.23■■□□□ 1.15
RPUSD3-216ENST00000484134 ADAMTSL3P82987 1691 aa22.23■■□□□ 1.15
RPUSD3-216ENST00000484134 RCCD1A6NED2 376 aa22.22■■□□□ 1.15
RPUSD3-216ENST00000484134 ZNF185O15231 689 aa22.22■■□□□ 1.15
RPUSD3-216ENST00000484134 UQCRFS1P1P0C7P4 283 aa22.22■■□□□ 1.15
RPUSD3-216ENST00000484134 CTSWP56202 376 aa22.22■■□□□ 1.15
RPUSD3-216ENST00000484134 NPY5RQ15761 445 aa22.22■■□□□ 1.15
RPUSD3-216ENST00000484134 IL17AQ16552 155 aa22.22■■□□□ 1.15
RPUSD3-216ENST00000484134 CCDC122Q5T0U0 273 aa22.22■■□□□ 1.15
RPUSD3-216ENST00000484134 V9GY48 417 aaPredicted RBP22.22■■□□□ 1.15
RPUSD3-216ENST00000484134 SPAG1Q07617 926 aa22.22■■□□□ 1.15
RPUSD3-216ENST00000484134 SEC23AQ15436 765 aa22.22■■□□□ 1.15
RPUSD3-216ENST00000484134 DNAJC21Q5F1R6 531 aaKnown RBP22.22■■□□□ 1.15
RPUSD3-216ENST00000484134 TMTC2Q8N394 836 aa22.22■■□□□ 1.15
RPUSD3-216ENST00000484134 ZCRB1Q8TBF4 217 aaKnown RBP22.22■■□□□ 1.15
RPUSD3-216ENST00000484134 TNFRSF25Q93038 417 aa22.22■■□□□ 1.15
RPUSD3-216ENST00000484134 PRCPP42785 496 aa22.21■■□□□ 1.15
RPUSD3-216ENST00000484134 CCNI2Q6ZMN8 369 aaPredicted RBP22.21■■□□□ 1.15
RPUSD3-216ENST00000484134 DNAJC7Q99615 494 aa22.21■■□□□ 1.15
RPUSD3-216ENST00000484134 LACRTQ9GZZ8 138 aa22.21■■□□□ 1.15
RPUSD3-216ENST00000484134 TARSL2A2RTX5 802 aaKnown RBP22.21■■□□□ 1.15
RPUSD3-216ENST00000484134 TRIM49BA6NDI0 452 aa22.21■■□□□ 1.15
RPUSD3-216ENST00000484134 PLEKHA8P1O95397 391 aa22.21■■□□□ 1.15
RPUSD3-216ENST00000484134 MAP3K12Q12852 859 aa22.21■■□□□ 1.15
RPUSD3-216ENST00000484134 MAP9Q49MG5 647 aa22.21■■□□□ 1.15
RPUSD3-216ENST00000484134 TTC38Q5R3I4 469 aa22.21■■□□□ 1.15
RPUSD3-216ENST00000484134 SMARCC1Q92922 1105 aaPredicted RBP22.21■■□□□ 1.15
RPUSD3-216ENST00000484134 SELENOOQ9BVL4 669 aa22.21■■□□□ 1.15
RPUSD3-216ENST00000484134 SHOX2O60902 331 aaPredicted RBP22.2■■□□□ 1.14
RPUSD3-216ENST00000484134 PARP1P09874 1014 aaKnown RBP22.2■■□□□ 1.14
RPUSD3-216ENST00000484134 FGFR2P21802 821 aa22.2■■□□□ 1.14
RPUSD3-216ENST00000484134 ATP2C1P98194 919 aaPredicted RBP22.2■■□□□ 1.14
RPUSD3-216ENST00000484134 NLRP10Q86W26 655 aa22.2■■□□□ 1.14
RPUSD3-216ENST00000484134 MB21D1Q8N884 522 aa22.2■■□□□ 1.14
RPUSD3-216ENST00000484134 MIGA1Q8NAN2 632 aa22.2■■□□□ 1.14
RPUSD3-216ENST00000484134 JAKMIP2Q96AA8 810 aa22.2■■□□□ 1.14
RPUSD3-216ENST00000484134 EHD4Q9H223 541 aa22.2■■□□□ 1.14
RPUSD3-216ENST00000484134 KAT14Q9H8E8 782 aa22.2■■□□□ 1.14
RPUSD3-216ENST00000484134 GNL3LQ9NVN8 582 aaKnown RBP22.2■■□□□ 1.14
RPUSD3-216ENST00000484134 TNS3Q68CZ2 1445 aa22.2■■□□□ 1.14
RPUSD3-216ENST00000484134 TNKSO95271 1327 aa22.2■■□□□ 1.14
RPUSD3-216ENST00000484134 GTPBP6O43824 516 aaPredicted RBP22.2■■□□□ 1.14
RPUSD3-216ENST00000484134 RCAN1P53805 252 aa22.2■■□□□ 1.14
RPUSD3-216ENST00000484134 PMS1P54277 932 aaKnown RBP22.2■■□□□ 1.14
RPUSD3-216ENST00000484134 ZNF658Q5TYW1 1059 aaPredicted RBP22.2■■□□□ 1.14
RPUSD3-216ENST00000484134 UBAC1Q9BSL1 405 aa22.2■■□□□ 1.14
RPUSD3-216ENST00000484134 LUC7L2Q9Y383 392 aaKnown RBP22.2■■□□□ 1.14
RPUSD3-216ENST00000484134 DUSP10Q9Y6W6 482 aa22.2■■□□□ 1.14
RPUSD3-216ENST00000484134 BAZ2BQ9UIF8 2168 aaKnown RBP22.2■■□□□ 1.14
RPUSD3-216ENST00000484134 ADAMTS3O15072 1205 aa22.19■■□□□ 1.14
RPUSD3-216ENST00000484134 KIF6Q6ZMV9 814 aa22.19■■□□□ 1.14
RPUSD3-216ENST00000484134 ANKRD20A12PQ8NF67 263 aa22.19■■□□□ 1.14
RPUSD3-216ENST00000484134 ZNF507Q8TCN5 953 aa22.19■■□□□ 1.14
RPUSD3-216ENST00000484134 PCDH11XQ9BZA7 1347 aa22.19■■□□□ 1.14
RPUSD3-216ENST00000484134 PCDH11YQ9BZA8 1340 aa22.19■■□□□ 1.14
RPUSD3-216ENST00000484134 CPP00450 1065 aa22.19■■□□□ 1.14
RPUSD3-216ENST00000484134 MCM3P25205 808 aa22.19■■□□□ 1.14
RPUSD3-216ENST00000484134 IRX3P78415 501 aaPredicted RBP22.19■■□□□ 1.14
RPUSD3-216ENST00000484134 EFCAB13Q8IY85 973 aa22.19■■□□□ 1.14
RPUSD3-216ENST00000484134 EXOC5O00471 708 aa22.18■■□□□ 1.14
RPUSD3-216ENST00000484134 RPN1P04843 607 aaKnown RBP22.18■■□□□ 1.14
RPUSD3-216ENST00000484134 LPIN2Q92539 896 aa22.18■■□□□ 1.14
RPUSD3-216ENST00000484134 IRS4O14654 1257 aaPredicted RBP22.18■■□□□ 1.14
RPUSD3-216ENST00000484134 PRPF3O43395 683 aaKnown RBP22.18■■□□□ 1.14
RPUSD3-216ENST00000484134 XBP1P17861 261 aa22.18■■□□□ 1.14
RPUSD3-216ENST00000484134 PUM3Q15397 648 aaKnown RBP22.18■■□□□ 1.14
RPUSD3-216ENST00000484134 GIGYF2Q6Y7W6 1299 aaKnown RBP22.18■■□□□ 1.14
RPUSD3-216ENST00000484134 TADA2BQ86TJ2 420 aa22.18■■□□□ 1.14
RPUSD3-216ENST00000484134 PROSER2Q86WR7 435 aaPredicted RBP22.18■■□□□ 1.14
RPUSD3-216ENST00000484134 DNAJC10Q8IXB1 793 aa22.18■■□□□ 1.14
RPUSD3-216ENST00000484134 CRACR2AQ9BSW2 395 aa22.18■■□□□ 1.14
RPUSD3-216ENST00000484134 NACAP1Q9BZK3 213 aa22.18■■□□□ 1.14
RPUSD3-216ENST00000484134 CAPN11Q9UMQ6 739 aa22.18■■□□□ 1.14
RPUSD3-216ENST00000484134 MYH13Q9UKX3 1938 aa22.17■■□□□ 1.14
RPUSD3-216ENST00000484134 BMP15O95972 392 aa22.17■■□□□ 1.14
RPUSD3-216ENST00000484134 GUCY2CP25092 1073 aa22.17■■□□□ 1.14
RPUSD3-216ENST00000484134 IRAK1P51617 712 aa22.17■■□□□ 1.14
RPUSD3-216ENST00000484134 PPARAQ07869 468 aa22.17■■□□□ 1.14
RPUSD3-216ENST00000484134 MTA3Q9BTC8 594 aa22.17■■□□□ 1.14
RPUSD3-216ENST00000484134 TNS2Q63HR2 1409 aa22.17■■□□□ 1.14
RPUSD3-216ENST00000484134 LGALS16A8MUM7 142 aa22.17■■□□□ 1.14
RPUSD3-216ENST00000484134 C2orf54Q08AI8 447 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms