RNA–Protein interactions for RNA: ENST00000483503.5

SND1-210, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-210ENST00000483503 RBM5P52756 815 aaKnown RBP eCLIP13.62□□□□□ -0.23
SND1-210ENST00000483503 ATP2C1P98194 919 aaPredicted RBP13.62□□□□□ -0.23
SND1-210ENST00000483503 ARL6IP4Q66PJ3 421 aaKnown RBP13.62□□□□□ -0.23
SND1-210ENST00000483503 C11orf57Q6ZUT1 292 aaPredicted RBP13.62□□□□□ -0.23
SND1-210ENST00000483503 MXD3Q9BW11 206 aa13.62□□□□□ -0.23
SND1-210ENST00000483503 TRIM5Q9C035 493 aa13.62□□□□□ -0.23
SND1-210ENST00000483503 C6orf50Q9HD87 102 aa13.62□□□□□ -0.23
SND1-210ENST00000483503 ZNF219Q9P2Y4 722 aaPredicted RBP13.62□□□□□ -0.23
SND1-210ENST00000483503 MYH8P13535 1937 aa13.61□□□□□ -0.23
SND1-210ENST00000483503 STXBP3O00186 592 aa13.61□□□□□ -0.23
SND1-210ENST00000483503 MYO1BO43795 1136 aa13.61□□□□□ -0.23
SND1-210ENST00000483503 ZNF500O60304 480 aaPredicted RBP13.61□□□□□ -0.23
SND1-210ENST00000483503 ZNF75DP51815 510 aa13.61□□□□□ -0.23
SND1-210ENST00000483503 AOC3Q16853 763 aa13.61□□□□□ -0.23
SND1-210ENST00000483503 PIK3AP1Q6ZUJ8 805 aa13.61□□□□□ -0.23
SND1-210ENST00000483503 KRT25Q7Z3Z0 450 aa13.61□□□□□ -0.23
SND1-210ENST00000483503 HEATR3Q7Z4Q2 680 aa13.61□□□□□ -0.23
SND1-210ENST00000483503 PLA2G4DQ86XP0 818 aa13.61□□□□□ -0.23
SND1-210ENST00000483503 KIAA0825Q8IV33 1275 aa13.61□□□□□ -0.23
SND1-210ENST00000483503 FOXP4Q8IVH2 680 aaPredicted RBP13.61□□□□□ -0.23
SND1-210ENST00000483503 PIBF1Q8WXW3 757 aa13.61□□□□□ -0.23
SND1-210ENST00000483503 PSMD1Q99460 953 aa13.61□□□□□ -0.23
SND1-210ENST00000483503 PI4KBQ9UBF8 816 aa13.61□□□□□ -0.23
SND1-210ENST00000483503 DACH1Q9UI36 760 aa13.61□□□□□ -0.23
SND1-210ENST00000483503 ESYT2A0FGR8 921 aa13.6□□□□□ -0.23
SND1-210ENST00000483503 LAD1O00515 517 aa13.6□□□□□ -0.23
SND1-210ENST00000483503 IKBKBO14920 756 aa13.6□□□□□ -0.23
SND1-210ENST00000483503 ENTPD3O75355 529 aa13.6□□□□□ -0.23
SND1-210ENST00000483503 SMC2O95347 1197 aa13.6□□□□□ -0.23
SND1-210ENST00000483503 AKR1B1P15121 316 aa13.6□□□□□ -0.23
SND1-210ENST00000483503 SHMT1P34896 483 aa13.6□□□□□ -0.23
SND1-210ENST00000483503 NAPAP54920 295 aa13.6□□□□□ -0.23
SND1-210ENST00000483503 ORC2Q13416 577 aaPredicted RBP13.6□□□□□ -0.23
SND1-210ENST00000483503 DHX8Q14562 1220 aaKnown RBP13.6□□□□□ -0.23
SND1-210ENST00000483503 ZNF174Q15697 407 aa13.6□□□□□ -0.23
SND1-210ENST00000483503 LONRF3Q496Y0 759 aa13.6□□□□□ -0.23
SND1-210ENST00000483503 GPATCH4Q5T3I0 446 aaKnown RBP13.6□□□□□ -0.23
SND1-210ENST00000483503 WWC2Q6AWC2 1192 aa13.6□□□□□ -0.23
SND1-210ENST00000483503 TRIML1Q8N9V2 468 aa13.6□□□□□ -0.23
SND1-210ENST00000483503 CSRNP2Q9H175 543 aa13.6□□□□□ -0.23
SND1-210ENST00000483503 RIOX1Q9H6W3 641 aa13.6□□□□□ -0.23
SND1-210ENST00000483503 TMOD2Q9NZR1 351 aa13.6□□□□□ -0.23
SND1-210ENST00000483503 COL2A1P02458 1487 aaPredicted RBP13.6□□□□□ -0.23
SND1-210ENST00000483503 FAM205CA6NFA0 338 aa13.59□□□□□ -0.23
SND1-210ENST00000483503 POLR2DO15514 142 aaKnown RBP13.59□□□□□ -0.23
SND1-210ENST00000483503 CYTH3O43739 400 aa13.59□□□□□ -0.23
SND1-210ENST00000483503 SNHG28P0DPA3 235 aa13.59□□□□□ -0.23
SND1-210ENST00000483503 PDHBP11177 359 aa13.59□□□□□ -0.23
SND1-210ENST00000483503 LONP1P36776 959 aaKnown RBP13.59□□□□□ -0.23
SND1-210ENST00000483503 TXLNAP40222 546 aa13.59□□□□□ -0.23
SND1-210ENST00000483503 PTGDRQ13258 359 aa13.59□□□□□ -0.23
SND1-210ENST00000483503 EARS2Q5JPH6 523 aaKnown RBP13.59□□□□□ -0.23
SND1-210ENST00000483503 CT47A1Q5JQC4 288 aaPredicted RBP13.59□□□□□ -0.23
SND1-210ENST00000483503 PPP1R18Q6NYC8 613 aa13.59□□□□□ -0.23
SND1-210ENST00000483503 DHX40Q8IX18 779 aaKnown RBP13.59□□□□□ -0.23
SND1-210ENST00000483503 DRC7Q8IY82 874 aa13.59□□□□□ -0.23
SND1-210ENST00000483503 AOPEPQ8N6M6 819 aa13.59□□□□□ -0.23
SND1-210ENST00000483503 GPKOWQ92917 476 aaPredicted RBP eCLIP13.59□□□□□ -0.232e-11■□□□□ 9.7
SND1-210ENST00000483503 MRFAP1L1Q96HT8 127 aa13.59□□□□□ -0.23
SND1-210ENST00000483503 ZMYND12Q9H0C1 365 aa13.59□□□□□ -0.23
SND1-210ENST00000483503 CLIP2Q9UDT6 1046 aa13.59□□□□□ -0.23
SND1-210ENST00000483503 HDAC9Q9UKV0 1011 aa13.59□□□□□ -0.23
SND1-210ENST00000483503 MTMR7Q9Y216 660 aa13.59□□□□□ -0.23
SND1-210ENST00000483503 USP17L5A8MUK1 530 aa13.58□□□□□ -0.24
SND1-210ENST00000483503 M0R2N6 131 aa13.58□□□□□ -0.24
SND1-210ENST00000483503 MPHOSPH10O00566 681 aaKnown RBP13.58□□□□□ -0.24
SND1-210ENST00000483503 AP5Z1O43299 807 aa13.58□□□□□ -0.24
SND1-210ENST00000483503 C21orf2O43822 256 aa13.58□□□□□ -0.24
SND1-210ENST00000483503 POSTNQ15063 836 aa13.58□□□□□ -0.24
SND1-210ENST00000483503 NT5DC1Q5TFE4 455 aa13.58□□□□□ -0.24
SND1-210ENST00000483503 USP17L2Q6R6M4 530 aa13.58□□□□□ -0.24
SND1-210ENST00000483503 METTL16Q86W50 562 aaKnown RBP13.58□□□□□ -0.24
SND1-210ENST00000483503 ZSCAN29Q8IWY8 852 aaPredicted RBP13.58□□□□□ -0.24
SND1-210ENST00000483503 SMARCE1Q969G3 411 aa13.58□□□□□ -0.24
SND1-210ENST00000483503 KANSL2Q9H9L4 492 aa13.58□□□□□ -0.24
SND1-210ENST00000483503 KCNQ5Q9NR82 932 aa13.58□□□□□ -0.24
SND1-210ENST00000483503 NYAP2Q9P242 653 aa13.58□□□□□ -0.24
SND1-210ENST00000483503 SERTAD1Q9UHV2 236 aa13.58□□□□□ -0.24
SND1-210ENST00000483503 PCDHA6Q9UN73 950 aa13.58□□□□□ -0.24
SND1-210ENST00000483503 PCDHA8Q9Y5H6 950 aa13.58□□□□□ -0.24
SND1-210ENST00000483503 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.58□□□□□ -0.242e-13■□□□□ 10.4
SND1-210ENST00000483503 BAZ2BQ9UIF8 2168 aaKnown RBP13.58□□□□□ -0.24
SND1-210ENST00000483503 SMCO2A6NFE2 343 aa13.57□□□□□ -0.24
SND1-210ENST00000483503 SLFN14P0C7P3 912 aa13.57□□□□□ -0.24
SND1-210ENST00000483503 GOLGA8HP0CJ92 632 aa13.57□□□□□ -0.24
SND1-210ENST00000483503 MDM2Q00987 491 aaPredicted RBP13.57□□□□□ -0.24
SND1-210ENST00000483503 ZNF543Q08ER8 600 aa13.57□□□□□ -0.24
SND1-210ENST00000483503 NFIAQ12857 509 aa13.57□□□□□ -0.24
SND1-210ENST00000483503 PNOCQ13519 176 aa13.57□□□□□ -0.24
SND1-210ENST00000483503 NONOQ15233 471 aaKnown RBP eCLIP13.57□□□□□ -0.24
SND1-210ENST00000483503 DPCR1Q3MIW9 517 aa13.57□□□□□ -0.24
SND1-210ENST00000483503 CFAP100Q494V2 611 aa13.57□□□□□ -0.24
SND1-210ENST00000483503 CERKLQ49MI3 558 aaPredicted RBP13.57□□□□□ -0.24
SND1-210ENST00000483503 RSBN1LQ6PCB5 846 aaPredicted RBP13.57□□□□□ -0.24
SND1-210ENST00000483503 CCDC125Q86Z20 511 aa13.57□□□□□ -0.24
SND1-210ENST00000483503 MLKLQ8NB16 471 aa13.57□□□□□ -0.24
SND1-210ENST00000483503 DCAF4Q8WV16 495 aa13.57□□□□□ -0.24
SND1-210ENST00000483503 MKL1Q969V6 931 aa13.57□□□□□ -0.24
SND1-210ENST00000483503 GLT8D2Q9H1C3 349 aa13.57□□□□□ -0.24
SND1-210ENST00000483503 FAM198AQ9UFP1 575 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms