RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 FASTKD5Q7L8L6 764 aaKnown RBP15.48■□□□□ 0.07
HDAC1-208ENST00000482310 CATIPQ7Z7H3 387 aa15.48■□□□□ 0.07
HDAC1-208ENST00000482310 FAM43AQ8N2R8 423 aa15.48■□□□□ 0.07
HDAC1-208ENST00000482310 MKL1Q969V6 931 aa15.48■□□□□ 0.07
HDAC1-208ENST00000482310 ABHD8Q96I13 439 aa15.48■□□□□ 0.07
HDAC1-208ENST00000482310 PTPN18Q99952 460 aa15.48■□□□□ 0.07
HDAC1-208ENST00000482310 BRPF3Q9ULD4 1205 aa15.48■□□□□ 0.07
HDAC1-208ENST00000482310 SLC12A7Q9Y666 1083 aa15.48■□□□□ 0.07
HDAC1-208ENST00000482310 A0A0G2JMZ2 1700 aa15.47■□□□□ 0.07
HDAC1-208ENST00000482310 GOLGA8BA8MQT2 603 aa15.47■□□□□ 0.07
HDAC1-208ENST00000482310 PDHXO00330 501 aa15.47■□□□□ 0.07
HDAC1-208ENST00000482310 IGF2BP3O00425 579 aaKnown RBP eCLIP15.47■□□□□ 0.07
HDAC1-208ENST00000482310 SLC1A4P43007 532 aa15.47■□□□□ 0.07
HDAC1-208ENST00000482310 NOVP48745 357 aa15.47■□□□□ 0.07
HDAC1-208ENST00000482310 STK3Q13188 491 aa15.47■□□□□ 0.07
HDAC1-208ENST00000482310 SH3D19Q5HYK7 790 aa15.47■□□□□ 0.07
HDAC1-208ENST00000482310 GPAT2Q6NUI2 795 aa15.47■□□□□ 0.07
HDAC1-208ENST00000482310 PROCA1Q8NCQ7 364 aaPredicted RBP15.47■□□□□ 0.07
HDAC1-208ENST00000482310 GMCL1P1Q8NEA9 526 aa15.47■□□□□ 0.07
HDAC1-208ENST00000482310 ANKS1AQ92625 1134 aa15.47■□□□□ 0.07
HDAC1-208ENST00000482310 CPVLQ9H3G5 476 aa15.47■□□□□ 0.07
HDAC1-208ENST00000482310 TSKSQ9UJT2 592 aa15.47■□□□□ 0.07
HDAC1-208ENST00000482310 AGTPBP1Q9UPW5 1226 aa15.47■□□□□ 0.07
HDAC1-208ENST00000482310 MGAMO43451 1857 aa15.46■□□□□ 0.07
HDAC1-208ENST00000482310 ZSWIM8A7E2V4 1837 aa15.46■□□□□ 0.07
HDAC1-208ENST00000482310 WDR46O15213 610 aaKnown RBP15.46■□□□□ 0.07
HDAC1-208ENST00000482310 PDHBP11177 359 aa15.46■□□□□ 0.07
HDAC1-208ENST00000482310 SLC16A2P36021 539 aa15.46■□□□□ 0.07
HDAC1-208ENST00000482310 LIFRP42702 1097 aa15.46■□□□□ 0.07
HDAC1-208ENST00000482310 IRX3P78415 501 aaPredicted RBP15.46■□□□□ 0.07
HDAC1-208ENST00000482310 RABEP1Q15276 862 aa15.46■□□□□ 0.07
HDAC1-208ENST00000482310 SYNE3Q6ZMZ3 975 aa15.46■□□□□ 0.07
HDAC1-208ENST00000482310 IFNL1Q8IU54 200 aa15.46■□□□□ 0.07
HDAC1-208ENST00000482310 LPAR1Q92633 364 aa15.46■□□□□ 0.07
HDAC1-208ENST00000482310 C12orf42Q96LP6 360 aa15.46■□□□□ 0.07
HDAC1-208ENST00000482310 FBXO28Q9NVF7 368 aa15.46■□□□□ 0.07
HDAC1-208ENST00000482310 GOLGA8AA7E2F4 631 aa15.45■□□□□ 0.06
HDAC1-208ENST00000482310 TMEM232C9JQI7 657 aa15.45■□□□□ 0.06
HDAC1-208ENST00000482310 FLOT1O75955 427 aa15.45■□□□□ 0.06
HDAC1-208ENST00000482310 PARP1P09874 1014 aaKnown RBP15.45■□□□□ 0.06
HDAC1-208ENST00000482310 CYP2C8P10632 490 aa15.45■□□□□ 0.06
HDAC1-208ENST00000482310 BMP3P12645 472 aa15.45■□□□□ 0.06
HDAC1-208ENST00000482310 TTBK2Q6IQ55 1244 aa15.45■□□□□ 0.06
HDAC1-208ENST00000482310 APOA5Q6Q788 366 aa15.45■□□□□ 0.06
HDAC1-208ENST00000482310 DCAF4Q8WV16 495 aa15.45■□□□□ 0.06
HDAC1-208ENST00000482310 IL17RAQ96F46 866 aa15.45■□□□□ 0.06
HDAC1-208ENST00000482310 MTA3Q9BTC8 594 aa15.45■□□□□ 0.06
HDAC1-208ENST00000482310 USP17L15C9J2P7 530 aa15.44■□□□□ 0.06
HDAC1-208ENST00000482310 USP17L13C9JLJ4 530 aa15.44■□□□□ 0.06
HDAC1-208ENST00000482310 USP17L11C9JVI0 530 aa15.44■□□□□ 0.06
HDAC1-208ENST00000482310 USP17L18D6R9N7 530 aa15.44■□□□□ 0.06
HDAC1-208ENST00000482310 USP17L22D6RA61 530 aa15.44■□□□□ 0.06
HDAC1-208ENST00000482310 USP17L17D6RBQ6 530 aa15.44■□□□□ 0.06
HDAC1-208ENST00000482310 USP17L19D6RCP7 530 aa15.44■□□□□ 0.06
HDAC1-208ENST00000482310 USP17L20D6RJB6 530 aa15.44■□□□□ 0.06
HDAC1-208ENST00000482310 ZBTB43O43298 467 aa15.44■□□□□ 0.06
HDAC1-208ENST00000482310 DHX16O60231 1041 aaKnown RBP15.44■□□□□ 0.06
HDAC1-208ENST00000482310 DDAH1O94760 285 aa15.44■□□□□ 0.06
HDAC1-208ENST00000482310 ECM2O94769 699 aaPredicted RBP15.44■□□□□ 0.06
HDAC1-208ENST00000482310 OSBPP22059 807 aa15.44■□□□□ 0.06
HDAC1-208ENST00000482310 SNAP25P60880 206 aa15.44■□□□□ 0.06
HDAC1-208ENST00000482310 CCT2P78371 535 aaKnown RBP15.44■□□□□ 0.06
HDAC1-208ENST00000482310 MAP2K1Q02750 393 aaPredicted RBP15.44■□□□□ 0.06
HDAC1-208ENST00000482310 USP17L24Q0WX57 530 aa15.44■□□□□ 0.06
HDAC1-208ENST00000482310 GRM4Q14833 912 aa15.44■□□□□ 0.06
HDAC1-208ENST00000482310 TAF1CQ15572 869 aaPredicted RBP15.44■□□□□ 0.06
HDAC1-208ENST00000482310 ANKRD23Q86SG2 305 aa15.44■□□□□ 0.06
HDAC1-208ENST00000482310 SGMS1Q86VZ5 419 aa15.44■□□□□ 0.06
HDAC1-208ENST00000482310 CMTR1Q8N1G2 835 aaKnown RBP15.44■□□□□ 0.06
HDAC1-208ENST00000482310 TMTC2Q8N394 836 aa15.44■□□□□ 0.06
HDAC1-208ENST00000482310 STAG2Q8N3U4 1231 aa15.44■□□□□ 0.06
HDAC1-208ENST00000482310 PIBF1Q8WXW3 757 aa15.44■□□□□ 0.06
HDAC1-208ENST00000482310 KIFC2Q96AC6 838 aa15.44■□□□□ 0.06
HDAC1-208ENST00000482310 GMCL1Q96IK5 515 aa15.44■□□□□ 0.06
HDAC1-208ENST00000482310 ASCC2Q9H1I8 757 aaPredicted RBP15.44■□□□□ 0.06
HDAC1-208ENST00000482310 TESPA1A2RU30 521 aaPredicted RBP15.43■□□□□ 0.06
HDAC1-208ENST00000482310 ST18O60284 1047 aa15.43■□□□□ 0.06
HDAC1-208ENST00000482310 PEX10O60683 326 aa15.43■□□□□ 0.06
HDAC1-208ENST00000482310 DTNBO60941 627 aa15.43■□□□□ 0.06
HDAC1-208ENST00000482310 PPFIA3O75145 1194 aa15.43■□□□□ 0.06
HDAC1-208ENST00000482310 CD2BP2O95400 341 aaKnown RBP15.43■□□□□ 0.06
HDAC1-208ENST00000482310 LARGE1O95461 756 aa15.43■□□□□ 0.06
HDAC1-208ENST00000482310 MAP2K2P36507 400 aa15.43■□□□□ 0.06
HDAC1-208ENST00000482310 METAP2P50579 478 aaKnown RBP eCLIP15.43■□□□□ 0.06
HDAC1-208ENST00000482310 ZNF543Q08ER8 600 aa15.43■□□□□ 0.06
HDAC1-208ENST00000482310 PABPC4Q13310 644 aaKnown RBP eCLIP15.43■□□□□ 0.06
HDAC1-208ENST00000482310 OTUD7BQ6GQQ9 843 aa15.43■□□□□ 0.06
HDAC1-208ENST00000482310 CATSPERGQ6ZRH7 1159 aa15.43■□□□□ 0.06
HDAC1-208ENST00000482310 CCDC82Q8N4S0 544 aa15.43■□□□□ 0.06
HDAC1-208ENST00000482310 CTCFLQ8NI51 663 aaPredicted RBP15.43■□□□□ 0.06
HDAC1-208ENST00000482310 SMCR8Q8TEV9 937 aaPredicted RBP15.43■□□□□ 0.06
HDAC1-208ENST00000482310 PAGR1Q9BTK6 254 aa15.43■□□□□ 0.06
HDAC1-208ENST00000482310 UBA5Q9GZZ9 404 aa15.43■□□□□ 0.06
HDAC1-208ENST00000482310 NCOA5Q9HCD5 579 aaKnown RBP15.43■□□□□ 0.06
HDAC1-208ENST00000482310 TPCN1Q9ULQ1 816 aa15.43■□□□□ 0.06
HDAC1-208ENST00000482310 SYNPO2Q9UMS6 1093 aa15.43■□□□□ 0.06
HDAC1-208ENST00000482310 RBBP6Q7Z6E9 1792 aaKnown RBP15.43■□□□□ 0.06
HDAC1-208ENST00000482310 PLXNB2O15031 1838 aa15.43■□□□□ 0.06
HDAC1-208ENST00000482310 PLEKHA8P1O95397 391 aa15.42■□□□□ 0.06
HDAC1-208ENST00000482310 TM4SF4P48230 202 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms