RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 SPICE1Q8N0Z3 855 aa13.52□□□□□ -0.25
HPS4-212ENST00000481910 RGS22Q8NE09 1264 aa13.52□□□□□ -0.25
HPS4-212ENST00000481910 GMCL1P1Q8NEA9 526 aa13.52□□□□□ -0.25
HPS4-212ENST00000481910 NUP133Q8WUM0 1156 aa13.52□□□□□ -0.25
HPS4-212ENST00000481910 SPOCK2Q92563 424 aa13.52□□□□□ -0.25
HPS4-212ENST00000481910 CCDC102AQ96A19 550 aa13.52□□□□□ -0.25
HPS4-212ENST00000481910 MYL10Q9BUA6 226 aa13.52□□□□□ -0.25
HPS4-212ENST00000481910 VCPKMTQ9H867 229 aa13.52□□□□□ -0.25
HPS4-212ENST00000481910 KCNH4Q9UQ05 1017 aa13.52□□□□□ -0.25
HPS4-212ENST00000481910 GRM1Q13255 1194 aa13.51□□□□□ -0.25
HPS4-212ENST00000481910 SNAPC2Q13487 334 aa13.51□□□□□ -0.25
HPS4-212ENST00000481910 DEFB115Q30KQ5 88 aa13.51□□□□□ -0.25
HPS4-212ENST00000481910 SLFN13Q68D06 897 aa13.51□□□□□ -0.25
HPS4-212ENST00000481910 APOA5Q6Q788 366 aa13.51□□□□□ -0.25
HPS4-212ENST00000481910 USP17L2Q6R6M4 530 aa13.51□□□□□ -0.25
HPS4-212ENST00000481910 RAB11FIP4Q86YS3 637 aa13.51□□□□□ -0.25
HPS4-212ENST00000481910 RASAL3Q86YV0 1011 aa13.51□□□□□ -0.25
HPS4-212ENST00000481910 EMILIN3Q9NT22 766 aa13.51□□□□□ -0.25
HPS4-212ENST00000481910 TMOD4Q9NZQ9 345 aa13.51□□□□□ -0.25
HPS4-212ENST00000481910 ZBTB43O43298 467 aa13.51□□□□□ -0.25
HPS4-212ENST00000481910 NDUFB10O96000 172 aa13.51□□□□□ -0.25
HPS4-212ENST00000481910 EVCP57679 992 aa13.51□□□□□ -0.25
HPS4-212ENST00000481910 FAM193AP78312 1265 aa13.51□□□□□ -0.25
HPS4-212ENST00000481910 TROAPQ12815 778 aa13.51□□□□□ -0.25
HPS4-212ENST00000481910 DGKZQ13574 1117 aa13.51□□□□□ -0.25
HPS4-212ENST00000481910 KIAA1755Q5JYT7 1200 aa13.51□□□□□ -0.25
HPS4-212ENST00000481910 MICU3Q86XE3 530 aa13.51□□□□□ -0.25
HPS4-212ENST00000481910 TPCN1Q9ULQ1 816 aa13.51□□□□□ -0.25
HPS4-212ENST00000481910 LIMCH1Q9UPQ0 1083 aa13.51□□□□□ -0.25
HPS4-212ENST00000481910 DDAH1O94760 285 aa13.5□□□□□ -0.25
HPS4-212ENST00000481910 CD2BP2O95400 341 aaKnown RBP13.5□□□□□ -0.25
HPS4-212ENST00000481910 SLC10A3P09131 477 aa13.5□□□□□ -0.25
HPS4-212ENST00000481910 CALM1P0DP23 149 aa13.5□□□□□ -0.25
HPS4-212ENST00000481910 CALM2P0DP24 149 aa13.5□□□□□ -0.25
HPS4-212ENST00000481910 CALM3P0DP25 149 aa13.5□□□□□ -0.25
HPS4-212ENST00000481910 PDHBP11177 359 aa13.5□□□□□ -0.25
HPS4-212ENST00000481910 RXRAP19793 462 aa13.5□□□□□ -0.25
HPS4-212ENST00000481910 PDIA3P30101 505 aaKnown RBP13.5□□□□□ -0.25
HPS4-212ENST00000481910 SLC1A4P43007 532 aa13.5□□□□□ -0.25
HPS4-212ENST00000481910 GTF2A2P52657 109 aa13.5□□□□□ -0.25
HPS4-212ENST00000481910 C1QTNF8P60827 252 aa13.5□□□□□ -0.25
HPS4-212ENST00000481910 SH3D19Q5HYK7 790 aa13.5□□□□□ -0.25
HPS4-212ENST00000481910 CCDC144CPQ8IYA2 1237 aa13.5□□□□□ -0.25
HPS4-212ENST00000481910 LPAR1Q92633 364 aa13.5□□□□□ -0.25
HPS4-212ENST00000481910 ZNF274Q96GC6 653 aaPredicted RBP13.5□□□□□ -0.25
HPS4-212ENST00000481910 PRDM10Q9NQV6 1147 aa13.5□□□□□ -0.25
HPS4-212ENST00000481910 ISY1Q9ULR0 285 aaKnown RBP13.5□□□□□ -0.25
HPS4-212ENST00000481910 PTPRFP10586 1907 aa13.49□□□□□ -0.25
HPS4-212ENST00000481910 A0A0G2JLL6 359 aaPredicted RBP13.49□□□□□ -0.25
HPS4-212ENST00000481910 RASSF10A6NK89 507 aa13.49□□□□□ -0.25
HPS4-212ENST00000481910 GOLGA8BA8MQT2 603 aa13.49□□□□□ -0.25
HPS4-212ENST00000481910 MCM2P49736 904 aa13.49□□□□□ -0.25
HPS4-212ENST00000481910 HTRA3P83110 453 aa13.49□□□□□ -0.25
HPS4-212ENST00000481910 STK3Q13188 491 aa13.49□□□□□ -0.25
HPS4-212ENST00000481910 CYP4F22Q6NT55 531 aa13.49□□□□□ -0.25
HPS4-212ENST00000481910 GADL1Q6ZQY3 521 aa13.49□□□□□ -0.25
HPS4-212ENST00000481910 PRRT2Q7Z6L0 340 aaPredicted RBP13.49□□□□□ -0.25
HPS4-212ENST00000481910 FANCBQ8NB91 859 aa13.49□□□□□ -0.25
HPS4-212ENST00000481910 FAM155AB1AL88 458 aaPredicted RBP13.49□□□□□ -0.25
HPS4-212ENST00000481910 PARP1P09874 1014 aaKnown RBP13.49□□□□□ -0.25
HPS4-212ENST00000481910 CETPP11597 493 aa13.49□□□□□ -0.25
HPS4-212ENST00000481910 CCT2P78371 535 aaKnown RBP13.49□□□□□ -0.25
HPS4-212ENST00000481910 CCDC96Q2M329 555 aa13.49□□□□□ -0.25
HPS4-212ENST00000481910 FASTKD5Q7L8L6 764 aaKnown RBP13.49□□□□□ -0.25
HPS4-212ENST00000481910 RASGRP2Q7LDG7 609 aa13.49□□□□□ -0.25
HPS4-212ENST00000481910 PROCA1Q8NCQ7 364 aaPredicted RBP13.49□□□□□ -0.25
HPS4-212ENST00000481910 CTCFLQ8NI51 663 aaPredicted RBP13.49□□□□□ -0.25
HPS4-212ENST00000481910 DCAF4Q8WV16 495 aa13.49□□□□□ -0.25
HPS4-212ENST00000481910 GMCL1Q96IK5 515 aa13.49□□□□□ -0.25
HPS4-212ENST00000481910 MS4A4AQ96JQ5 239 aa13.49□□□□□ -0.25
HPS4-212ENST00000481910 C12orf42Q96LP6 360 aa13.49□□□□□ -0.25
HPS4-212ENST00000481910 NUP88Q99567 741 aaPredicted RBP13.49□□□□□ -0.25
HPS4-212ENST00000481910 FRMPD2Q68DX3 1309 aaPredicted RBP13.48□□□□□ -0.25
HPS4-212ENST00000481910 GOLGA8HP0CJ92 632 aa13.48□□□□□ -0.25
HPS4-212ENST00000481910 SNHG28P0DPA3 235 aa13.48□□□□□ -0.25
HPS4-212ENST00000481910 BMP3P12645 472 aa13.48□□□□□ -0.25
HPS4-212ENST00000481910 VCAM1P19320 739 aa13.48□□□□□ -0.25
HPS4-212ENST00000481910 METAP2P50579 478 aaKnown RBP eCLIP13.48□□□□□ -0.25
HPS4-212ENST00000481910 RCAN1P53805 252 aa13.48□□□□□ -0.25
HPS4-212ENST00000481910 ME3Q16798 604 aa13.48□□□□□ -0.25
HPS4-212ENST00000481910 FAM83BQ5T0W9 1011 aa13.48□□□□□ -0.25
HPS4-212ENST00000481910 KCTD1Q719H9 257 aa13.48□□□□□ -0.25
HPS4-212ENST00000481910 ZSCAN31Q96LW9 406 aaPredicted RBP13.48□□□□□ -0.25
HPS4-212ENST00000481910 MAP3K14Q99558 947 aa13.48□□□□□ -0.25
HPS4-212ENST00000481910 SLKQ9H2G2 1235 aaPredicted RBP13.48□□□□□ -0.25
HPS4-212ENST00000481910 KCNG1Q9UIX4 513 aa13.48□□□□□ -0.25
HPS4-212ENST00000481910 HPS5Q9UPZ3 1129 aa13.48□□□□□ -0.25
HPS4-212ENST00000481910 CCL15-CCL14A0A0B4J2E2 113 aa13.47□□□□□ -0.25
HPS4-212ENST00000481910 GOLGA8AA7E2F4 631 aa13.47□□□□□ -0.25
HPS4-212ENST00000481910 WDR46O15213 610 aaKnown RBP13.47□□□□□ -0.25
HPS4-212ENST00000481910 HSPA6P17066 643 aa13.47□□□□□ -0.25
HPS4-212ENST00000481910 KIF5BP33176 963 aa13.47□□□□□ -0.25
HPS4-212ENST00000481910 ZNF543Q08ER8 600 aa13.47□□□□□ -0.25
HPS4-212ENST00000481910 GRM4Q14833 912 aa13.47□□□□□ -0.25
HPS4-212ENST00000481910 CCL15Q16663 113 aa13.47□□□□□ -0.25
HPS4-212ENST00000481910 CAPNS2Q96L46 248 aa13.47□□□□□ -0.25
HPS4-212ENST00000481910 RPAP3Q9H6T3 665 aaPredicted RBP13.47□□□□□ -0.25
HPS4-212ENST00000481910 GPCPD1Q9NPB8 672 aa13.47□□□□□ -0.25
HPS4-212ENST00000481910 CCDC196A0A1B0GTZ2 297 aa13.47□□□□□ -0.25
HPS4-212ENST00000481910 MANSC4A6NHS7 340 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms