RNA–Protein interactions for RNA: ENST00000480060.5

CCHCR1-213, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 601 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-213ENST00000480060 SCRN1Q12765 414 aa12.37□□□□□ -0.43
CCHCR1-213ENST00000480060 TROAPQ12815 778 aa12.37□□□□□ -0.43
CCHCR1-213ENST00000480060 MAP3K11Q16584 847 aa12.37□□□□□ -0.43
CCHCR1-213ENST00000480060 RTN1Q16799 776 aa12.37□□□□□ -0.43
CCHCR1-213ENST00000480060 CPLX2Q6PUV4 134 aaKnown RBP12.37□□□□□ -0.43
CCHCR1-213ENST00000480060 CCDC144CPQ8IYA2 1237 aa12.37□□□□□ -0.43
CCHCR1-213ENST00000480060 LRRC47Q8N1G4 583 aaKnown RBP12.37□□□□□ -0.43
CCHCR1-213ENST00000480060 SPRYD3Q8NCJ5 442 aa12.37□□□□□ -0.43
CCHCR1-213ENST00000480060 SLC17A8Q8NDX2 589 aa12.37□□□□□ -0.43
CCHCR1-213ENST00000480060 CTCFLQ8NI51 663 aaPredicted RBP12.37□□□□□ -0.43
CCHCR1-213ENST00000480060 GTF3C6Q969F1 213 aa12.37□□□□□ -0.43
CCHCR1-213ENST00000480060 MAP3K14Q99558 947 aa12.37□□□□□ -0.43
CCHCR1-213ENST00000480060 SH2D4AQ9H788 454 aa12.37□□□□□ -0.43
CCHCR1-213ENST00000480060 AS3MTQ9HBK9 375 aa12.37□□□□□ -0.43
CCHCR1-213ENST00000480060 FOXD4L1Q9NU39 408 aa12.37□□□□□ -0.43
CCHCR1-213ENST00000480060 SYNPO2Q9UMS6 1093 aa12.37□□□□□ -0.43
CCHCR1-213ENST00000480060 MTMR7Q9Y216 660 aa12.37□□□□□ -0.43
CCHCR1-213ENST00000480060 PTPN22Q9Y2R2 807 aa12.37□□□□□ -0.43
CCHCR1-213ENST00000480060 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.37□□□□□ -0.43
CCHCR1-213ENST00000480060 SSC5DA1L4H1 1573 aa12.37□□□□□ -0.43
CCHCR1-213ENST00000480060 CENPFP49454 3210 aa12.37□□□□□ -0.43
CCHCR1-213ENST00000480060 LAMA4Q16363 1823 aa12.37□□□□□ -0.43
CCHCR1-213ENST00000480060 FOCADQ5VW36 1801 aa12.37□□□□□ -0.43
CCHCR1-213ENST00000480060 ECM29Q5VYK3 1845 aa12.37□□□□□ -0.43
CCHCR1-213ENST00000480060 PTPRAP18433 802 aa12.36□□□□□ -0.43
CCHCR1-213ENST00000480060 KIF5BP33176 963 aa12.36□□□□□ -0.43
CCHCR1-213ENST00000480060 ADD1P35611 737 aaKnown RBP12.36□□□□□ -0.43
CCHCR1-213ENST00000480060 INHBEP58166 350 aa12.36□□□□□ -0.43
CCHCR1-213ENST00000480060 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.36□□□□□ -0.43
CCHCR1-213ENST00000480060 ANKRD13AQ8IZ07 590 aa12.36□□□□□ -0.43
CCHCR1-213ENST00000480060 ACER1Q8TDN7 264 aa12.36□□□□□ -0.43
CCHCR1-213ENST00000480060 INTS4Q96HW7 963 aaKnown RBP12.36□□□□□ -0.43
CCHCR1-213ENST00000480060 NCOA5Q9HCD5 579 aaKnown RBP12.36□□□□□ -0.43
CCHCR1-213ENST00000480060 RBM28Q9NW13 759 aaKnown RBP12.36□□□□□ -0.43
CCHCR1-213ENST00000480060 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.36□□□□□ -0.43
CCHCR1-213ENST00000480060 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.36□□□□□ -0.43
CCHCR1-213ENST00000480060 TMX2Q9Y320 296 aa12.36□□□□□ -0.43
CCHCR1-213ENST00000480060 MYH1P12882 1939 aa12.36□□□□□ -0.43
CCHCR1-213ENST00000480060 LAMB1P07942 1786 aa12.35□□□□□ -0.43
CCHCR1-213ENST00000480060 RANBP2P49792 3224 aaKnown RBP12.35□□□□□ -0.43
CCHCR1-213ENST00000480060 A0A1W2PRG0 241 aa12.35□□□□□ -0.43
CCHCR1-213ENST00000480060 UNCXA6NJT0 531 aa12.35□□□□□ -0.43
CCHCR1-213ENST00000480060 F5H6K3 240 aa12.35□□□□□ -0.43
CCHCR1-213ENST00000480060 RAD21O60216 631 aa12.35□□□□□ -0.43
CCHCR1-213ENST00000480060 PARP1P09874 1014 aaKnown RBP12.35□□□□□ -0.43
CCHCR1-213ENST00000480060 CDC27P30260 824 aa12.35□□□□□ -0.43
CCHCR1-213ENST00000480060 GNAQP50148 359 aa12.35□□□□□ -0.43
CCHCR1-213ENST00000480060 KLRC3Q07444 240 aa12.35□□□□□ -0.43
CCHCR1-213ENST00000480060 VGLL4Q14135 290 aa12.35□□□□□ -0.43
CCHCR1-213ENST00000480060 GRM4Q14833 912 aa12.35□□□□□ -0.43
CCHCR1-213ENST00000480060 SLFN13Q68D06 897 aa12.35□□□□□ -0.43
CCHCR1-213ENST00000480060 CCDC84Q86UT8 332 aaPredicted RBP12.35□□□□□ -0.43
CCHCR1-213ENST00000480060 GMCL1P1Q8NEA9 526 aa12.35□□□□□ -0.43
CCHCR1-213ENST00000480060 LLPHQ9BRT6 129 aaKnown RBP12.35□□□□□ -0.43
CCHCR1-213ENST00000480060 WDR18Q9BV38 432 aa12.35□□□□□ -0.43
CCHCR1-213ENST00000480060 GOPCQ9HD26 462 aa12.35□□□□□ -0.43
CCHCR1-213ENST00000480060 FAM217BQ9NTX9 383 aaPredicted RBP12.35□□□□□ -0.43
CCHCR1-213ENST00000480060 SMC3Q9UQE7 1217 aa12.35□□□□□ -0.43
CCHCR1-213ENST00000480060 ZHX2Q9Y6X8 837 aa12.35□□□□□ -0.43
CCHCR1-213ENST00000480060 CDK5RAP2Q96SN8 1893 aa12.35□□□□□ -0.43
CCHCR1-213ENST00000480060 PAPPA2Q9BXP8 1791 aa12.34□□□□□ -0.43
CCHCR1-213ENST00000480060 USP17L10C9JJH3 530 aa12.34□□□□□ -0.43
CCHCR1-213ENST00000480060 CDKL5O76039 1030 aa12.34□□□□□ -0.43
CCHCR1-213ENST00000480060 PDHBP11177 359 aa12.34□□□□□ -0.43
CCHCR1-213ENST00000480060 ST3GAL1Q11201 340 aa12.34□□□□□ -0.43
CCHCR1-213ENST00000480060 LDLRAD1Q5T700 205 aa12.34□□□□□ -0.43
CCHCR1-213ENST00000480060 SPRYD7Q5W111 196 aa12.34□□□□□ -0.43
CCHCR1-213ENST00000480060 USP17L2Q6R6M4 530 aa12.34□□□□□ -0.43
CCHCR1-213ENST00000480060 ZNF280CQ8ND82 737 aa12.34□□□□□ -0.43
CCHCR1-213ENST00000480060 DCAF4Q8WV16 495 aa12.34□□□□□ -0.43
CCHCR1-213ENST00000480060 SLC10A4Q96EP9 437 aa12.34□□□□□ -0.43
CCHCR1-213ENST00000480060 FEZ1Q99689 392 aa12.34□□□□□ -0.43
CCHCR1-213ENST00000480060 LZTS2Q9BRK4 669 aa12.34□□□□□ -0.43
CCHCR1-213ENST00000480060 ELP3Q9H9T3 547 aa12.34□□□□□ -0.43
CCHCR1-213ENST00000480060 CWC22Q9HCG8 908 aaKnown RBP12.34□□□□□ -0.43
CCHCR1-213ENST00000480060 SNCAIPQ9Y6H5 919 aa12.34□□□□□ -0.43
CCHCR1-213ENST00000480060 NID2Q14112 1375 aa12.33□□□□□ -0.44
CCHCR1-213ENST00000480060 PALM3A6NDB9 673 aaPredicted RBP12.33□□□□□ -0.44
CCHCR1-213ENST00000480060 H0YGN5 161 aa12.33□□□□□ -0.44
CCHCR1-213ENST00000480060 NDUFB10O96000 172 aa12.33□□□□□ -0.44
CCHCR1-213ENST00000480060 SNHG28P0DPA3 235 aa12.33□□□□□ -0.44
CCHCR1-213ENST00000480060 SLC1A4P43007 532 aa12.33□□□□□ -0.44
CCHCR1-213ENST00000480060 USP14P54578 494 aa12.33□□□□□ -0.44
CCHCR1-213ENST00000480060 SSRP1Q08945 709 aaKnown RBP12.33□□□□□ -0.44
CCHCR1-213ENST00000480060 SPP2Q13103 211 aa12.33□□□□□ -0.44
CCHCR1-213ENST00000480060 ZYXQ15942 572 aaKnown RBP12.33□□□□□ -0.44
CCHCR1-213ENST00000480060 CCDC96Q2M329 555 aa12.33□□□□□ -0.44
CCHCR1-213ENST00000480060 ASPRV1Q53RT3 343 aa12.33□□□□□ -0.44
CCHCR1-213ENST00000480060 ERO1BQ86YB8 467 aa12.33□□□□□ -0.44
CCHCR1-213ENST00000480060 NSUN7Q8NE18 718 aaKnown RBP12.33□□□□□ -0.44
CCHCR1-213ENST00000480060 GMCL1Q96IK5 515 aa12.33□□□□□ -0.44
CCHCR1-213ENST00000480060 KIAA1683Q9H0B3 1180 aa12.33□□□□□ -0.44
CCHCR1-213ENST00000480060 VCPKMTQ9H867 229 aa12.33□□□□□ -0.44
CCHCR1-213ENST00000480060 GPCPD1Q9NPB8 672 aa12.33□□□□□ -0.44
CCHCR1-213ENST00000480060 MAD2L2Q9UI95 211 aa12.33□□□□□ -0.44
CCHCR1-213ENST00000480060 ISY1Q9ULR0 285 aaKnown RBP12.33□□□□□ -0.44
CCHCR1-213ENST00000480060 AFG3L2Q9Y4W6 797 aa12.33□□□□□ -0.44
CCHCR1-213ENST00000480060 SIPA1L1O43166 1804 aa12.32□□□□□ -0.44
CCHCR1-213ENST00000480060 PTPDC1A2A3K4 754 aa12.32□□□□□ -0.44
CCHCR1-213ENST00000480060 TRIM75PA6NK02 468 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms