RNA–Protein interactions for RNA: ENST00000479782.1

RPP40-205, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5

Gene RPP40, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-205ENST00000479782 LPAR1Q92633 364 aa16.46■□□□□ 0.23
RPP40-205ENST00000479782 PHKBQ93100 1093 aa16.46■□□□□ 0.23
RPP40-205ENST00000479782 DDX11Q96FC9 970 aa16.46■□□□□ 0.23
RPP40-205ENST00000479782 FEZ1Q99689 392 aa16.46■□□□□ 0.23
RPP40-205ENST00000479782 SPZ1Q9BXG8 430 aa16.46■□□□□ 0.23
RPP40-205ENST00000479782 ORC3Q9UBD5 711 aaPredicted RBP16.46■□□□□ 0.23
RPP40-205ENST00000479782 SNCAIPQ9Y6H5 919 aa16.46■□□□□ 0.23
RPP40-205ENST00000479782 USP17L10C9JJH3 530 aa16.45■□□□□ 0.22
RPP40-205ENST00000479782 TRAF5O00463 557 aa16.45■□□□□ 0.22
RPP40-205ENST00000479782 RAD21O60216 631 aa16.45■□□□□ 0.22
RPP40-205ENST00000479782 DEXIO95424 95 aa16.45■□□□□ 0.22
RPP40-205ENST00000479782 NDUFB10O96000 172 aa16.45■□□□□ 0.22
RPP40-205ENST00000479782 NUCB2P80303 420 aa16.45■□□□□ 0.22
RPP40-205ENST00000479782 AKAP17AQ02040 695 aaKnown RBP16.45■□□□□ 0.22
RPP40-205ENST00000479782 SLC26A6Q9BXS9 759 aa16.45■□□□□ 0.22
RPP40-205ENST00000479782 MYH6P13533 1939 aa16.45■□□□□ 0.22
RPP40-205ENST00000479782 TRPM7Q96QT4 1865 aa16.44■□□□□ 0.22
RPP40-205ENST00000479782 C19orf81C9J6K1 198 aa16.44■□□□□ 0.22
RPP40-205ENST00000479782 ITGBL1O95965 494 aaPredicted RBP16.44■□□□□ 0.22
RPP40-205ENST00000479782 GOLGA8HP0CJ92 632 aa16.44■□□□□ 0.22
RPP40-205ENST00000479782 BMP3P12645 472 aa16.44■□□□□ 0.22
RPP40-205ENST00000479782 BACE1P56817 501 aa16.44■□□□□ 0.22
RPP40-205ENST00000479782 LDLRAD1Q5T700 205 aa16.44■□□□□ 0.22
RPP40-205ENST00000479782 LARP1BQ659C4 914 aaKnown RBP16.44■□□□□ 0.22
RPP40-205ENST00000479782 RASGRP2Q7LDG7 609 aa16.44■□□□□ 0.22
RPP40-205ENST00000479782 CCDC84Q86UT8 332 aaPredicted RBP16.44■□□□□ 0.22
RPP40-205ENST00000479782 CMTR1Q8N1G2 835 aaKnown RBP16.44■□□□□ 0.22
RPP40-205ENST00000479782 CCDC82Q8N4S0 544 aa16.44■□□□□ 0.22
RPP40-205ENST00000479782 ZHX2Q9Y6X8 837 aa16.44■□□□□ 0.22
RPP40-205ENST00000479782 FRMPD2Q68DX3 1309 aaPredicted RBP16.44■□□□□ 0.22
RPP40-205ENST00000479782 STX6O43752 255 aa16.43■□□□□ 0.22
RPP40-205ENST00000479782 SYT1P21579 422 aa16.43■□□□□ 0.22
RPP40-205ENST00000479782 PPATQ06203 517 aa16.43■□□□□ 0.22
RPP40-205ENST00000479782 SPP2Q13103 211 aa16.43■□□□□ 0.22
RPP40-205ENST00000479782 KCTD1Q719H9 257 aa16.43■□□□□ 0.22
RPP40-205ENST00000479782 ERO1BQ86YB8 467 aa16.43■□□□□ 0.22
RPP40-205ENST00000479782 C2orf69Q8N8R5 385 aa16.43■□□□□ 0.22
RPP40-205ENST00000479782 RBM46Q8TBY0 533 aaKnown RBP16.43■□□□□ 0.22
RPP40-205ENST00000479782 RIOX1Q9H6W3 641 aa16.43■□□□□ 0.22
RPP40-205ENST00000479782 ZNF408Q9H9D4 720 aa16.43■□□□□ 0.22
RPP40-205ENST00000479782 GBA2Q9HCG7 927 aaPredicted RBP16.43■□□□□ 0.22
RPP40-205ENST00000479782 GPCPD1Q9NPB8 672 aa16.43■□□□□ 0.22
RPP40-205ENST00000479782 AFG3L2Q9Y4W6 797 aa16.43■□□□□ 0.22
RPP40-205ENST00000479782 SPDYE5A6NIY4 337 aa16.42■□□□□ 0.22
RPP40-205ENST00000479782 WDR46O15213 610 aaKnown RBP16.42■□□□□ 0.22
RPP40-205ENST00000479782 PLA2G6O60733 806 aa16.42■□□□□ 0.22
RPP40-205ENST00000479782 PPFIA3O75145 1194 aa16.42■□□□□ 0.22
RPP40-205ENST00000479782 CELF2O95319 508 aaKnown RBP16.42■□□□□ 0.22
RPP40-205ENST00000479782 MTMR2Q13614 643 aa16.42■□□□□ 0.22
RPP40-205ENST00000479782 ZYXQ15942 572 aaKnown RBP16.42■□□□□ 0.22
RPP40-205ENST00000479782 BTNL9Q6UXG8 535 aa16.42■□□□□ 0.22
RPP40-205ENST00000479782 SPICE1Q8N0Z3 855 aa16.42■□□□□ 0.22
RPP40-205ENST00000479782 C12orf42Q96LP6 360 aa16.42■□□□□ 0.22
RPP40-205ENST00000479782 ALG1Q9BT22 464 aa16.42■□□□□ 0.22
RPP40-205ENST00000479782 ISY1Q9ULR0 285 aaKnown RBP16.42■□□□□ 0.22
RPP40-205ENST00000479782 V9GY48 417 aaPredicted RBP16.42■□□□□ 0.22
RPP40-205ENST00000479782 WDR33Q9C0J8 1336 aaKnown RBP16.42■□□□□ 0.22
RPP40-205ENST00000479782 TRIM75PA6NK02 468 aa16.41■□□□□ 0.22
RPP40-205ENST00000479782 TMEM232C9JQI7 657 aa16.41■□□□□ 0.22
RPP40-205ENST00000479782 KIF3CO14782 793 aa16.41■□□□□ 0.22
RPP40-205ENST00000479782 CYTH3O43739 400 aa16.41■□□□□ 0.22
RPP40-205ENST00000479782 DTNBO60941 627 aa16.41■□□□□ 0.22
RPP40-205ENST00000479782 XBP1P17861 261 aa16.41■□□□□ 0.22
RPP40-205ENST00000479782 STAT2P52630 851 aa16.41■□□□□ 0.22
RPP40-205ENST00000479782 FMR1Q06787 632 aaKnown RBP eCLIP16.41■□□□□ 0.22
RPP40-205ENST00000479782 SH3D19Q5HYK7 790 aa16.41■□□□□ 0.22
RPP40-205ENST00000479782 KIAA1755Q5JYT7 1200 aa16.41■□□□□ 0.22
RPP40-205ENST00000479782 MOB2Q70IA6 237 aa16.41■□□□□ 0.22
RPP40-205ENST00000479782 SMC1BQ8NDV3 1235 aa16.41■□□□□ 0.22
RPP40-205ENST00000479782 RRP36Q96EU6 259 aaKnown RBP16.41■□□□□ 0.22
RPP40-205ENST00000479782 C8orf76Q96K31 380 aa16.41■□□□□ 0.22
RPP40-205ENST00000479782 ELP3Q9H9T3 547 aa16.41■□□□□ 0.22
RPP40-205ENST00000479782 SEC63Q9UGP8 760 aaKnown RBP16.41■□□□□ 0.22
RPP40-205ENST00000479782 UBE2Q2LH0YL09 131 aa16.4■□□□□ 0.22
RPP40-205ENST00000479782 H3BQV1 296 aa16.4■□□□□ 0.22
RPP40-205ENST00000479782 hCG_1984214I3L0E3 225 aa16.4■□□□□ 0.22
RPP40-205ENST00000479782 BRD1O95696 1058 aa16.4■□□□□ 0.22
RPP40-205ENST00000479782 SCG2P13521 617 aa16.4■□□□□ 0.22
RPP40-205ENST00000479782 PPIL2Q13356 520 aa16.4■□□□□ 0.22
RPP40-205ENST00000479782 PKN1Q16512 942 aa16.4■□□□□ 0.22
RPP40-205ENST00000479782 PFKFB3Q16875 520 aaPredicted RBP16.4■□□□□ 0.22
RPP40-205ENST00000479782 SLC35G1Q2M3R5 365 aa16.4■□□□□ 0.22
RPP40-205ENST00000479782 FAM83BQ5T0W9 1011 aa16.4■□□□□ 0.22
RPP40-205ENST00000479782 IFFO2Q5TF58 517 aa16.4■□□□□ 0.22
RPP40-205ENST00000479782 FAM160B2Q86V87 743 aa16.4■□□□□ 0.22
RPP40-205ENST00000479782 FAM177A1Q8N128 213 aaPredicted RBP16.4■□□□□ 0.22
RPP40-205ENST00000479782 ZNF713Q8N859 430 aaPredicted RBP16.4■□□□□ 0.22
RPP40-205ENST00000479782 CHURC1Q8WUH1 139 aa16.4■□□□□ 0.22
RPP40-205ENST00000479782 CLMNQ96JQ2 1002 aa16.4■□□□□ 0.22
RPP40-205ENST00000479782 NUP88Q99567 741 aaPredicted RBP16.4■□□□□ 0.22
RPP40-205ENST00000479782 UBA5Q9GZZ9 404 aa16.4■□□□□ 0.22
RPP40-205ENST00000479782 EMILIN3Q9NT22 766 aa16.4■□□□□ 0.22
RPP40-205ENST00000479782 FEM1BQ9UK73 627 aa16.4■□□□□ 0.22
RPP40-205ENST00000479782 PTPRFP10586 1907 aa16.4■□□□□ 0.22
RPP40-205ENST00000479782 LOC285556D6RIA3 1793 aa16.4■□□□□ 0.22
RPP40-205ENST00000479782 VPS37CA5D8V6 355 aaPredicted RBP16.39■□□□□ 0.21
RPP40-205ENST00000479782 CXCL11O14625 94 aa16.39■□□□□ 0.21
RPP40-205ENST00000479782 VCAM1P19320 739 aa16.39■□□□□ 0.21
RPP40-205ENST00000479782 IKQ13123 557 aaPredicted RBP16.39■□□□□ 0.21
RPP40-205ENST00000479782 TRIM29Q14134 588 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms