RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 LRRC10BA6NIK2 292 aa23.28■■□□□ 1.32
COL13A1-208ENST00000479733 AGPSO00116 658 aa23.28■■□□□ 1.32
COL13A1-208ENST00000479733 PSMD14O00487 310 aa23.28■■□□□ 1.32
COL13A1-208ENST00000479733 PCCAP05165 728 aaPredicted RBP23.28■■□□□ 1.32
COL13A1-208ENST00000479733 GOLGA6DP0CG33 693 aa23.28■■□□□ 1.32
COL13A1-208ENST00000479733 EFCAB13Q8IY85 973 aa23.28■■□□□ 1.32
COL13A1-208ENST00000479733 LACRTQ9GZZ8 138 aa23.28■■□□□ 1.32
COL13A1-208ENST00000479733 GOLGA6AQ9NYA3 693 aa23.28■■□□□ 1.32
COL13A1-208ENST00000479733 RWDD2AQ9UIY3 292 aa23.28■■□□□ 1.32
COL13A1-208ENST00000479733 ABCC12Q96J65 1359 aa23.28■■□□□ 1.32
COL13A1-208ENST00000479733 PDE8BO95263 885 aa23.28■■□□□ 1.32
COL13A1-208ENST00000479733 XBP1P17861 261 aa23.28■■□□□ 1.32
COL13A1-208ENST00000479733 ZBTB38Q8NAP3 1195 aaPredicted RBP23.28■■□□□ 1.32
COL13A1-208ENST00000479733 DEF6Q9H4E7 631 aa23.28■■□□□ 1.32
COL13A1-208ENST00000479733 WDR17Q8IZU2 1322 aa23.28■■□□□ 1.32
COL13A1-208ENST00000479733 RCCD1A6NED2 376 aa23.27■■□□□ 1.32
COL13A1-208ENST00000479733 EXOC5O00471 708 aa23.27■■□□□ 1.32
COL13A1-208ENST00000479733 PRCPP42785 496 aa23.27■■□□□ 1.32
COL13A1-208ENST00000479733 MATR3P43243 847 aaKnown RBP eCLIP23.27■■□□□ 1.32
COL13A1-208ENST00000479733 CYP27A1Q02318 531 aa23.27■■□□□ 1.32
COL13A1-208ENST00000479733 ALX1Q15699 326 aa23.27■■□□□ 1.32
COL13A1-208ENST00000479733 GPIHBP1Q8IV16 184 aa23.27■■□□□ 1.32
COL13A1-208ENST00000479733 GOLGA6BA6NDN3 693 aa23.27■■□□□ 1.32
COL13A1-208ENST00000479733 PLEKHA8P1O95397 391 aa23.27■■□□□ 1.32
COL13A1-208ENST00000479733 TJP1Q07157 1748 aa23.27■■□□□ 1.32
COL13A1-208ENST00000479733 MAP3K12Q12852 859 aa23.27■■□□□ 1.32
COL13A1-208ENST00000479733 SPATA5Q8NB90 893 aa23.27■■□□□ 1.32
COL13A1-208ENST00000479733 MYO5AQ9Y4I1 1855 aaKnown RBP23.27■■□□□ 1.32
COL13A1-208ENST00000479733 PARP1P09874 1014 aaKnown RBP23.26■■□□□ 1.31
COL13A1-208ENST00000479733 MCM7P33993 719 aa23.26■■□□□ 1.31
COL13A1-208ENST00000479733 SPAG1Q07617 926 aa23.26■■□□□ 1.31
COL13A1-208ENST00000479733 PKN1Q16512 942 aa23.26■■□□□ 1.31
COL13A1-208ENST00000479733 TTC38Q5R3I4 469 aa23.26■■□□□ 1.31
COL13A1-208ENST00000479733 FERMT2Q96AC1 680 aa23.26■■□□□ 1.31
COL13A1-208ENST00000479733 PPARAQ07869 468 aa23.26■■□□□ 1.31
COL13A1-208ENST00000479733 TRIM14Q14142 442 aa23.26■■□□□ 1.31
COL13A1-208ENST00000479733 EZH2Q15910 746 aaKnown RBP23.26■■□□□ 1.31
COL13A1-208ENST00000479733 CCNI2Q6ZMN8 369 aaPredicted RBP23.26■■□□□ 1.31
COL13A1-208ENST00000479733 BAZ2BQ9UIF8 2168 aaKnown RBP23.26■■□□□ 1.31
COL13A1-208ENST00000479733 GUCY2CP25092 1073 aa23.26■■□□□ 1.31
COL13A1-208ENST00000479733 MCM3P25205 808 aa23.26■■□□□ 1.31
COL13A1-208ENST00000479733 IRAK1P51617 712 aa23.26■■□□□ 1.31
COL13A1-208ENST00000479733 WDR59Q6PJI9 974 aa23.26■■□□□ 1.31
COL13A1-208ENST00000479733 NACAP1Q9BZK3 213 aa23.26■■□□□ 1.31
COL13A1-208ENST00000479733 IDEP14735 1019 aa23.25■■□□□ 1.31
COL13A1-208ENST00000479733 RASGRF1Q13972 1273 aa23.25■■□□□ 1.31
COL13A1-208ENST00000479733 HLFQ16534 295 aa23.25■■□□□ 1.31
COL13A1-208ENST00000479733 SND1Q7KZF4 910 aaKnown RBP eCLIP23.25■■□□□ 1.31
COL13A1-208ENST00000479733 GPATCH11Q8N954 259 aa23.25■■□□□ 1.31
COL13A1-208ENST00000479733 BCAS4Q8TDM0 211 aa23.25■■□□□ 1.31
COL13A1-208ENST00000479733 HDAC7Q8WUI4 952 aa23.25■■□□□ 1.31
COL13A1-208ENST00000479733 PSMB7Q99436 277 aa23.25■■□□□ 1.31
COL13A1-208ENST00000479733 AGPAT5Q9NUQ2 364 aa23.25■■□□□ 1.31
COL13A1-208ENST00000479733 TNKSO95271 1327 aa23.25■■□□□ 1.31
COL13A1-208ENST00000479733 PMS1P54277 932 aaKnown RBP23.25■■□□□ 1.31
COL13A1-208ENST00000479733 KIF6Q6ZMV9 814 aa23.25■■□□□ 1.31
COL13A1-208ENST00000479733 MB21D1Q8N884 522 aa23.25■■□□□ 1.31
COL13A1-208ENST00000479733 SDR42E1Q8WUS8 393 aa23.25■■□□□ 1.31
COL13A1-208ENST00000479733 RRP36Q96EU6 259 aaKnown RBP23.25■■□□□ 1.31
COL13A1-208ENST00000479733 PLIN2Q99541 437 aa23.25■■□□□ 1.31
COL13A1-208ENST00000479733 SAMM50Q9Y512 469 aa23.25■■□□□ 1.31
COL13A1-208ENST00000479733 CAMTA1Q9Y6Y1 1673 aa23.24■■□□□ 1.31
COL13A1-208ENST00000479733 A0A087WUV0 522 aaPredicted RBP23.24■■□□□ 1.31
COL13A1-208ENST00000479733 IRF2BP1Q8IU81 584 aa23.24■■□□□ 1.31
COL13A1-208ENST00000479733 VGLL2Q8N8G2 317 aa23.24■■□□□ 1.31
COL13A1-208ENST00000479733 SMCR8Q8TEV9 937 aaPredicted RBP23.24■■□□□ 1.31
COL13A1-208ENST00000479733 PHF20Q9BVI0 1012 aa23.24■■□□□ 1.31
COL13A1-208ENST00000479733 POLD4Q9HCU8 107 aa23.24■■□□□ 1.31
COL13A1-208ENST00000479733 KLK7P49862 253 aa23.24■■□□□ 1.31
COL13A1-208ENST00000479733 PAPD7Q5XG87 772 aaKnown RBP23.24■■□□□ 1.31
COL13A1-208ENST00000479733 PIK3AP1Q6ZUJ8 805 aa23.24■■□□□ 1.31
COL13A1-208ENST00000479733 STAG1Q8WVM7 1258 aa23.24■■□□□ 1.31
COL13A1-208ENST00000479733 ATRNO75882 1429 aa23.24■■□□□ 1.31
COL13A1-208ENST00000479733 LOC102724159A0A0B4J2E5 919 aa23.23■■□□□ 1.31
COL13A1-208ENST00000479733 ERLIN2O94905 339 aa23.23■■□□□ 1.31
COL13A1-208ENST00000479733 RPN1P04843 607 aaKnown RBP23.23■■□□□ 1.31
COL13A1-208ENST00000479733 SLC7A5Q01650 507 aa23.23■■□□□ 1.31
COL13A1-208ENST00000479733 PWP2Q15269 919 aaKnown RBP23.23■■□□□ 1.31
COL13A1-208ENST00000479733 PCMTD1Q96MG8 357 aaPredicted RBP23.23■■□□□ 1.31
COL13A1-208ENST00000479733 RNF26Q9BY78 433 aaPredicted RBP23.23■■□□□ 1.31
COL13A1-208ENST00000479733 IQSEC3Q9UPP2 1182 aaPredicted RBP23.23■■□□□ 1.31
COL13A1-208ENST00000479733 FAM169AQ9Y6X4 670 aa23.23■■□□□ 1.31
COL13A1-208ENST00000479733 LMTK3Q96Q04 1460 aa23.23■■□□□ 1.31
COL13A1-208ENST00000479733 EBAG9O00559 213 aa23.23■■□□□ 1.31
COL13A1-208ENST00000479733 KRT86O43790 486 aa23.23■■□□□ 1.31
COL13A1-208ENST00000479733 EIF5P55010 431 aaKnown RBP23.23■■□□□ 1.31
COL13A1-208ENST00000479733 TMTC2Q8N394 836 aa23.23■■□□□ 1.31
COL13A1-208ENST00000479733 KAT2BQ92831 832 aa23.23■■□□□ 1.31
COL13A1-208ENST00000479733 MYH7P12883 1935 aa23.23■■□□□ 1.31
COL13A1-208ENST00000479733 UQCRFS1P1P0C7P4 283 aa23.22■■□□□ 1.31
COL13A1-208ENST00000479733 CKAP4Q07065 602 aaKnown RBP23.22■■□□□ 1.31
COL13A1-208ENST00000479733 ZNF658Q5TYW1 1059 aaPredicted RBP23.22■■□□□ 1.31
COL13A1-208ENST00000479733 FBXW10Q5XX13 1052 aa23.22■■□□□ 1.31
COL13A1-208ENST00000479733 AKAP11Q9UKA4 1901 aa23.22■■□□□ 1.31
COL13A1-208ENST00000479733 B4DLN1 442 aa23.22■■□□□ 1.31
COL13A1-208ENST00000479733 CTSWP56202 376 aa23.22■■□□□ 1.31
COL13A1-208ENST00000479733 GNGT1P63211 74 aa23.22■■□□□ 1.31
COL13A1-208ENST00000479733 PDXDC2PQ6P474 469 aa23.22■■□□□ 1.31
COL13A1-208ENST00000479733 RASSF8Q8NHQ8 419 aa23.22■■□□□ 1.31
COL13A1-208ENST00000479733 ZCRB1Q8TBF4 217 aaKnown RBP23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms