RNA–Protein interactions for RNA: ENST00000479544.6

USP42-206, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 1 (best)

Gene USP42, Length 4,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-206ENST00000479544 UPF1Q92900 1129 aaKnown RBP eCLIP15.07■□□□□ 0
USP42-206ENST00000479544 FAM169AQ9Y6X4 670 aa15.07■□□□□ 0
USP42-206ENST00000479544 ZMYM6O95789 1325 aa15.07■□□□□ 0
USP42-206ENST00000479544 MAGEB6P1A0A0J9YX57 407 aa15.06■□□□□ 0
USP42-206ENST00000479544 ZNF76P36508 570 aa15.06■□□□□ 0
USP42-206ENST00000479544 FBXW10Q5XX13 1052 aa15.06■□□□□ 0
USP42-206ENST00000479544 BUB1BO60566 1050 aaPredicted RBP15.06■□□□□ 0
USP42-206ENST00000479544 TXKP42681 527 aa15.06■□□□□ 0
USP42-206ENST00000479544 RASGRP4Q8TDF6 673 aa15.06■□□□□ 0
USP42-206ENST00000479544 PYM1Q9BRP8 204 aaKnown RBP15.06■□□□□ 0
USP42-206ENST00000479544 QRICH2Q9H0J4 1663 aa15.06■□□□□ 0
USP42-206ENST00000479544 BAG6P46379 1132 aa15.06■□□□□ 0
USP42-206ENST00000479544 FMR1Q06787 632 aaKnown RBP eCLIP15.06■□□□□ 0
USP42-206ENST00000479544 PDE4BQ07343 736 aa15.06■□□□□ 0
USP42-206ENST00000479544 AKNAD1Q5T1N1 836 aa15.06■□□□□ 0
USP42-206ENST00000479544 FANCBQ8NB91 859 aa15.06■□□□□ 0
USP42-206ENST00000479544 MICAL1Q8TDZ2 1067 aa15.06■□□□□ 0
USP42-206ENST00000479544 RAB34Q9BZG1 259 aa15.06■□□□□ 0
USP42-206ENST00000479544 MCM9Q9NXL9 1143 aa15.06■□□□□ 0
USP42-206ENST00000479544 TRIM10Q9UDY6 481 aa15.06■□□□□ 0
USP42-206ENST00000479544 ADGRL3Q9HAR2 1447 aa15.06■□□□□ 0
USP42-206ENST00000479544 CLTAP09496 248 aa15.06■□□□□ 0
USP42-206ENST00000479544 TNNC1P63316 161 aa15.06■□□□□ 0
USP42-206ENST00000479544 TRIM14Q14142 442 aa15.06■□□□□ 0
USP42-206ENST00000479544 PPP1R7Q15435 360 aa15.06■□□□□ 0
USP42-206ENST00000479544 NAA35Q5VZE5 725 aa15.06■□□□□ 0
USP42-206ENST00000479544 USP49Q70CQ1 688 aa15.06■□□□□ 0
USP42-206ENST00000479544 ANKS4BQ8N8V4 417 aa15.06■□□□□ 0
USP42-206ENST00000479544 NOA1Q8NC60 698 aaKnown RBP15.06■□□□□ 0
USP42-206ENST00000479544 A0A1B0GUA9 196 aa15.05■□□□□ 0
USP42-206ENST00000479544 NELFCDQ8IXH7 590 aa15.05■□□□□ 0
USP42-206ENST00000479544 SELENOOQ9BVL4 669 aa15.05■□□□□ 0
USP42-206ENST00000479544 ESYT3A0FGR9 886 aa15.05■□□□□ -0
USP42-206ENST00000479544 PRKAB2O43741 272 aa15.05■□□□□ -0
USP42-206ENST00000479544 PDE6AP16499 860 aa15.05■□□□□ -0
USP42-206ENST00000479544 ARHGAP25P42331 645 aa15.05■□□□□ -0
USP42-206ENST00000479544 TNNI2P48788 182 aa15.05■□□□□ -0
USP42-206ENST00000479544 ACTN3Q08043 901 aaPredicted RBP15.05■□□□□ -0
USP42-206ENST00000479544 SMARCC2Q8TAQ2 1214 aa15.05■□□□□ -0
USP42-206ENST00000479544 MGARPQ8TDB4 240 aa15.05■□□□□ -0
USP42-206ENST00000479544 NOX5Q96PH1 765 aa15.05■□□□□ -0
USP42-206ENST00000479544 RGS17Q9UGC6 210 aaPredicted RBP15.05■□□□□ -0
USP42-206ENST00000479544 GCOM1H8Y6P7 765 aaPredicted RBP15.05■□□□□ -0
USP42-206ENST00000479544 PPP6R2O75170 966 aa15.05■□□□□ -0
USP42-206ENST00000479544 NDUFA10O95299 355 aa15.05■□□□□ -0
USP42-206ENST00000479544 CTDNEP1O95476 244 aa15.05■□□□□ -0
USP42-206ENST00000479544 MYZAPP0CAP1 466 aa15.05■□□□□ -0
USP42-206ENST00000479544 DCAF17Q5H9S7 520 aaPredicted RBP15.05■□□□□ -0
USP42-206ENST00000479544 L2HGDHQ9H9P8 463 aa15.05■□□□□ -0
USP42-206ENST00000479544 DIP2AQ14689 1571 aa15.04■□□□□ -0
USP42-206ENST00000479544 BACH1O14867 736 aa15.04■□□□□ -0
USP42-206ENST00000479544 CCDC172P0C7W6 258 aa15.04■□□□□ -0
USP42-206ENST00000479544 ZSCAN29Q8IWY8 852 aaPredicted RBP15.04■□□□□ -0
USP42-206ENST00000479544 GDAQ9Y2T3 454 aa15.04■□□□□ -0
USP42-206ENST00000479544 BICDL2A1A5D9 508 aa15.04■□□□□ -0
USP42-206ENST00000479544 H3BQF6 201 aa15.04■□□□□ -0
USP42-206ENST00000479544 MFAP3LO75121 409 aa15.04■□□□□ -0
USP42-206ENST00000479544 PHKA1P46020 1223 aa15.04■□□□□ -0
USP42-206ENST00000479544 EHHADHQ08426 723 aa15.04■□□□□ -0
USP42-206ENST00000479544 LLGL1Q15334 1064 aa15.04■□□□□ -0
USP42-206ENST00000479544 METTL16Q86W50 562 aaKnown RBP15.04■□□□□ -0
USP42-206ENST00000479544 IFNL3Q8IZI9 196 aa15.04■□□□□ -0
USP42-206ENST00000479544 MRRFQ96E11 262 aaKnown RBP15.04■□□□□ -0
USP42-206ENST00000479544 DPH5Q9H2P9 285 aa15.04■□□□□ -0
USP42-206ENST00000479544 EPB41L5Q9HCM4 733 aa15.04■□□□□ -0
USP42-206ENST00000479544 ZSWIM5Q9P217 1185 aa15.04■□□□□ -0
USP42-206ENST00000479544 SERPINA10Q9UK55 444 aa15.04■□□□□ -0
USP42-206ENST00000479544 SASH3O75995 380 aa15.04■□□□□ -0
USP42-206ENST00000479544 MAP3K9P80192 1104 aa15.04■□□□□ -0
USP42-206ENST00000479544 RASSF7Q02833 373 aa15.04■□□□□ -0
USP42-206ENST00000479544 PAK2Q13177 524 aa15.04■□□□□ -0
USP42-206ENST00000479544 KRT31Q15323 416 aa15.04■□□□□ -0
USP42-206ENST00000479544 CFAP221Q4G0U5 840 aa15.04■□□□□ -0
USP42-206ENST00000479544 CCDC51Q96ER9 411 aa15.04■□□□□ -0
USP42-206ENST00000479544 STK38LQ9Y2H1 464 aa15.04■□□□□ -0
USP42-206ENST00000479544 TSPY3P0CV98 308 aa15.03■□□□□ -0
USP42-206ENST00000479544 TSPY8P0CW00 308 aa15.03■□□□□ -0
USP42-206ENST00000479544 FOXR1Q6PIV2 292 aa15.03■□□□□ -0
USP42-206ENST00000479544 ENGASEQ8NFI3 743 aa15.03■□□□□ -0
USP42-206ENST00000479544 GPKOWQ92917 476 aaPredicted RBP eCLIP15.03■□□□□ -0
USP42-206ENST00000479544 RSRC1Q96IZ7 334 aaKnown RBP15.03■□□□□ -0
USP42-206ENST00000479544 LRWD1Q9UFC0 647 aa15.03■□□□□ -0
USP42-206ENST00000479544 UBE2Q2LH0YL09 131 aa15.03■□□□□ -0
USP42-206ENST00000479544 CTNNA1P35221 906 aaKnown RBP15.03■□□□□ -0
USP42-206ENST00000479544 PPARAQ07869 468 aa15.03■□□□□ -0
USP42-206ENST00000479544 RAD9BQ6WBX8 426 aa15.03■□□□□ -0
USP42-206ENST00000479544 KRT12Q99456 494 aa15.03■□□□□ -0
USP42-206ENST00000479544 RIPOR2Q9Y4F9 1068 aa15.03■□□□□ -0
USP42-206ENST00000479544 NBPF14Q5TI25 921 aa15.03■□□□□ -0
USP42-206ENST00000479544 MMS22LQ6ZRQ5 1243 aa15.03■□□□□ -0
USP42-206ENST00000479544 CCDC155Q8N6L0 562 aa15.03■□□□□ -0
USP42-206ENST00000479544 CHP1Q99653 195 aa15.03■□□□□ -0
USP42-206ENST00000479544 SLC39A2Q9NP94 309 aa15.03■□□□□ -0
USP42-206ENST00000479544 SAMD15Q9P1V8 674 aa15.03■□□□□ -0
USP42-206ENST00000479544 TRIM49BA6NDI0 452 aa15.03■□□□□ -0
USP42-206ENST00000479544 KCNK3O14649 394 aa15.03■□□□□ -0
USP42-206ENST00000479544 PARP1P09874 1014 aaKnown RBP15.03■□□□□ -0
USP42-206ENST00000479544 CDC27P30260 824 aa15.03■□□□□ -0
USP42-206ENST00000479544 IFNAR2P48551 515 aa15.03■□□□□ -0
USP42-206ENST00000479544 DAAM2Q86T65 1068 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms