RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 TRIM10Q9UDY6 481 aa15.06■□□□□ 0
PDZRN3-208ENST00000479530 ERICH2A1L162 156 aa15.05■□□□□ 0
PDZRN3-208ENST00000479530 GNAT2P19087 354 aa15.05■□□□□ 0
PDZRN3-208ENST00000479530 ARHGAP25P42331 645 aa15.05■□□□□ 0
PDZRN3-208ENST00000479530 SART3Q15020 963 aaKnown RBP15.05■□□□□ 0
PDZRN3-208ENST00000479530 SAFBQ15424 915 aaKnown RBP eCLIP15.05■□□□□ 0
PDZRN3-208ENST00000479530 RILPL1Q5EBL4 403 aa15.05■□□□□ 0
PDZRN3-208ENST00000479530 DEXIO95424 95 aa15.05■□□□□ -0
PDZRN3-208ENST00000479530 FUT2Q10981 343 aa15.05■□□□□ -0
PDZRN3-208ENST00000479530 NAA15Q9BXJ9 866 aaKnown RBP15.05■□□□□ -0
PDZRN3-208ENST00000479530 TFR2Q9UP52 801 aa15.05■□□□□ -0
PDZRN3-208ENST00000479530 TAF1P21675 1872 aa15.05■□□□□ -0
PDZRN3-208ENST00000479530 BCL9LQ86UU0 1499 aa15.04■□□□□ -0
PDZRN3-208ENST00000479530 CYP2D6P10635 497 aa15.04■□□□□ -0
PDZRN3-208ENST00000479530 NOP2P46087 812 aaKnown RBP15.04■□□□□ -0
PDZRN3-208ENST00000479530 FAM47AQ5JRC9 791 aa15.04■□□□□ -0
PDZRN3-208ENST00000479530 ANKRD18AQ8IVF6 992 aa15.04■□□□□ -0
PDZRN3-208ENST00000479530 ZNF804BA4D1E1 1349 aa15.04■□□□□ -0
PDZRN3-208ENST00000479530 GOLGB1Q14789 3259 aaKnown RBP15.04■□□□□ -0
PDZRN3-208ENST00000479530 CTAGE15A4D2H0 777 aa15.04■□□□□ -0
PDZRN3-208ENST00000479530 PPP1R3GB7ZBB8 358 aa15.04■□□□□ -0
PDZRN3-208ENST00000479530 USP17L12C9JPN9 530 aa15.04■□□□□ -0
PDZRN3-208ENST00000479530 USP17L21D6R901 530 aa15.04■□□□□ -0
PDZRN3-208ENST00000479530 ERLIN1O75477 346 aa15.04■□□□□ -0
PDZRN3-208ENST00000479530 CTAGE8P0CG41 777 aa15.04■□□□□ -0
PDZRN3-208ENST00000479530 CTAGE6Q86UF2 777 aa15.04■□□□□ -0
PDZRN3-208ENST00000479530 TEX2Q8IWB9 1127 aa15.04■□□□□ -0
PDZRN3-208ENST00000479530 CTAGE4Q8IX94 777 aa15.04■□□□□ -0
PDZRN3-208ENST00000479530 PAGE5Q96GU1 130 aa15.04■□□□□ -0
PDZRN3-208ENST00000479530 NAPGQ99747 312 aaPredicted RBP15.04■□□□□ -0
PDZRN3-208ENST00000479530 SLF1Q9BQI6 1058 aa15.04■□□□□ -0
PDZRN3-208ENST00000479530 FOXP1Q9H334 677 aaPredicted RBP15.04■□□□□ -0
PDZRN3-208ENST00000479530 DOT1LQ8TEK3 1739 aa15.03■□□□□ -0
PDZRN3-208ENST00000479530 TBC1D9BQ66K14 1250 aa15.03■□□□□ -0
PDZRN3-208ENST00000479530 CTR9Q6PD62 1173 aa15.03■□□□□ -0
PDZRN3-208ENST00000479530 LRRC31Q6UY01 552 aa15.03■□□□□ -0
PDZRN3-208ENST00000479530 ZNF579Q8NAF0 562 aaKnown RBP15.03■□□□□ -0
PDZRN3-208ENST00000479530 ZSCAN10Q96SZ4 725 aaPredicted RBP15.03■□□□□ -0
PDZRN3-208ENST00000479530 SRP68Q9UHB9 627 aaKnown RBP15.03■□□□□ -0
PDZRN3-208ENST00000479530 BAZ2BQ9UIF8 2168 aaKnown RBP15.03■□□□□ -0
PDZRN3-208ENST00000479530 ENC1O14682 589 aa15.03■□□□□ -0
PDZRN3-208ENST00000479530 EIF3JO75822 258 aaKnown RBP15.03■□□□□ -0
PDZRN3-208ENST00000479530 TXNRD3Q86VQ6 643 aa15.03■□□□□ -0
PDZRN3-208ENST00000479530 GDAP1L1Q96MZ0 367 aa15.03■□□□□ -0
PDZRN3-208ENST00000479530 FAM204AQ9H8W3 233 aa15.03■□□□□ -0
PDZRN3-208ENST00000479530 HDAC6Q9UBN7 1215 aa15.03■□□□□ -0
PDZRN3-208ENST00000479530 POTEB2H3BUK9 544 aa15.02■□□□□ -0
PDZRN3-208ENST00000479530 CHRM1P11229 460 aaPredicted RBP15.02■□□□□ -0
PDZRN3-208ENST00000479530 AMPD2Q01433 879 aa15.02■□□□□ -0
PDZRN3-208ENST00000479530 SKIDA1Q1XH10 827 aa15.02■□□□□ -0
PDZRN3-208ENST00000479530 AMIGO3Q86WK7 504 aa15.02■□□□□ -0
PDZRN3-208ENST00000479530 WASF1Q92558 559 aa15.02■□□□□ -0
PDZRN3-208ENST00000479530 ESR2Q92731 530 aa15.02■□□□□ -0
PDZRN3-208ENST00000479530 SYMPKQ92797 1274 aaKnown RBP15.02■□□□□ -0
PDZRN3-208ENST00000479530 CHP1Q99653 195 aa15.02■□□□□ -0
PDZRN3-208ENST00000479530 VPS16Q9H269 839 aa15.02■□□□□ -0
PDZRN3-208ENST00000479530 ABHD10Q9NUJ1 306 aa15.02■□□□□ -0
PDZRN3-208ENST00000479530 CTNND2Q9UQB3 1225 aa15.02■□□□□ -0
PDZRN3-208ENST00000479530 COL16A1Q07092 1604 aaPredicted RBP15.02■□□□□ -0
PDZRN3-208ENST00000479530 ZNF174Q15697 407 aa15.02□□□□□ -0.01
PDZRN3-208ENST00000479530 RIN2Q8WYP3 895 aaPredicted RBP15.02□□□□□ -0.01
PDZRN3-208ENST00000479530 RNF41Q9H4P4 317 aaPredicted RBP15.02□□□□□ -0.01
PDZRN3-208ENST00000479530 AATFQ9NY61 560 aaKnown RBP eCLIP15.02□□□□□ -0.01
PDZRN3-208ENST00000479530 PRDX5P30044 214 aa15.02□□□□□ -0.01
PDZRN3-208ENST00000479530 TROAPQ12815 778 aa15.02□□□□□ -0.01
PDZRN3-208ENST00000479530 KRT31Q15323 416 aa15.02□□□□□ -0.01
PDZRN3-208ENST00000479530 KANK3Q6NY19 840 aa15.02□□□□□ -0.01
PDZRN3-208ENST00000479530 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.02□□□□□ -0.01
PDZRN3-208ENST00000479530 CNGA4Q8IV77 575 aa15.02□□□□□ -0.01
PDZRN3-208ENST00000479530 BLZF1Q9H2G9 400 aa15.02□□□□□ -0.01
PDZRN3-208ENST00000479530 TTF2Q9UNY4 1162 aaKnown RBP15.02□□□□□ -0.01
PDZRN3-208ENST00000479530 REXO2Q9Y3B8 237 aaKnown RBP15.02□□□□□ -0.01
PDZRN3-208ENST00000479530 NID2Q14112 1375 aa15.01□□□□□ -0.01
PDZRN3-208ENST00000479530 IVLP07476 585 aa15.01□□□□□ -0.01
PDZRN3-208ENST00000479530 NPY5RQ15761 445 aa15.01□□□□□ -0.01
PDZRN3-208ENST00000479530 FAM182BQ5T319 152 aa15.01□□□□□ -0.01
PDZRN3-208ENST00000479530 IFIT1BQ5T764 474 aaKnown RBP15.01□□□□□ -0.01
PDZRN3-208ENST00000479530 SH3RF1Q7Z6J0 888 aa15.01□□□□□ -0.01
PDZRN3-208ENST00000479530 PACS2Q86VP3 889 aa15.01□□□□□ -0.01
PDZRN3-208ENST00000479530 MYO6Q9UM54 1294 aa15.01□□□□□ -0.01
PDZRN3-208ENST00000479530 SRGAP2O75044 1071 aa15.01□□□□□ -0.01
PDZRN3-208ENST00000479530 ZMYND10O75800 440 aa15.01□□□□□ -0.01
PDZRN3-208ENST00000479530 SYF2O95926 243 aaKnown RBP15.01□□□□□ -0.01
PDZRN3-208ENST00000479530 FECHP22830 423 aa15.01□□□□□ -0.01
PDZRN3-208ENST00000479530 MECOMQ03112 1051 aa15.01□□□□□ -0.01
PDZRN3-208ENST00000479530 HSP90B2PQ58FF3 399 aa15.01□□□□□ -0.01
PDZRN3-208ENST00000479530 TMTC2Q8N394 836 aa15.01□□□□□ -0.01
PDZRN3-208ENST00000479530 SRBD1Q8N5C6 995 aaKnown RBP15.01□□□□□ -0.01
PDZRN3-208ENST00000479530 FAM71BQ8TC56 605 aa15.01□□□□□ -0.01
PDZRN3-208ENST00000479530 BSDC1Q9NW68 430 aaPredicted RBP15.01□□□□□ -0.01
PDZRN3-208ENST00000479530 TAB2Q9NYJ8 693 aa15.01□□□□□ -0.01
PDZRN3-208ENST00000479530 ANAPC4Q9UJX5 808 aa15.01□□□□□ -0.01
PDZRN3-208ENST00000479530 GUCA1BQ9UMX6 200 aa15.01□□□□□ -0.01
PDZRN3-208ENST00000479530 CCDC196A0A1B0GTZ2 297 aa15□□□□□ -0.01
PDZRN3-208ENST00000479530 EIF3CLB5ME19 914 aaKnown RBP15□□□□□ -0.01
PDZRN3-208ENST00000479530 N4BP3O15049 544 aa15□□□□□ -0.01
PDZRN3-208ENST00000479530 RNF40O75150 1001 aa15□□□□□ -0.01
PDZRN3-208ENST00000479530 RPS6KA5O75582 802 aa15□□□□□ -0.01
PDZRN3-208ENST00000479530 AKAP17AQ02040 695 aaKnown RBP15□□□□□ -0.01
PDZRN3-208ENST00000479530 WHAMMP3Q1A5X7 153 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms