RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 LENG1Q96BZ8 264 aaPredicted RBP8.05□□□□□ -1.12
VCP-205ENST00000479300 SPATC1LQ9H0A9 340 aa8.05□□□□□ -1.12
VCP-205ENST00000479300 ANTXR1Q9H6X2 564 aa8.05□□□□□ -1.12
VCP-205ENST00000479300 SERPINB13Q9UIV8 391 aa8.05□□□□□ -1.12
VCP-205ENST00000479300 DBNLQ9UJU6 430 aaKnown RBP8.05□□□□□ -1.12
VCP-205ENST00000479300 DDX19BQ9UMR2 479 aa8.05□□□□□ -1.12
VCP-205ENST00000479300 PHF24Q9UPV7 400 aa8.05□□□□□ -1.12
VCP-205ENST00000479300 IVNS1ABPQ9Y6Y0 642 aa8.05□□□□□ -1.12
VCP-205ENST00000479300 SMIM22K7EJ46 135 aa8.04□□□□□ -1.12
VCP-205ENST00000479300 KIAA0355O15063 1070 aa8.04□□□□□ -1.12
VCP-205ENST00000479300 DNAJB2P25686 324 aa8.04□□□□□ -1.12
VCP-205ENST00000479300 USP14P54578 494 aa8.04□□□□□ -1.12
VCP-205ENST00000479300 CERKLQ49MI3 558 aaPredicted RBP8.04□□□□□ -1.12
VCP-205ENST00000479300 C16orf59Q7L2K0 433 aa8.04□□□□□ -1.12
VCP-205ENST00000479300 DPP9Q86TI2 863 aa8.04□□□□□ -1.12
VCP-205ENST00000479300 CERS3Q8IU89 383 aa8.04□□□□□ -1.12
VCP-205ENST00000479300 RPAP2Q8IXW5 612 aaPredicted RBP8.04□□□□□ -1.12
VCP-205ENST00000479300 CLASRPQ8N2M8 674 aaKnown RBP8.04□□□□□ -1.12
VCP-205ENST00000479300 PANK1Q8TE04 598 aa8.04□□□□□ -1.12
VCP-205ENST00000479300 MAML3Q96JK9 1138 aa8.04□□□□□ -1.12
VCP-205ENST00000479300 ZNF512BQ96KM6 892 aaPredicted RBP8.04□□□□□ -1.12
VCP-205ENST00000479300 RNPC3Q96LT9 517 aaKnown RBP8.04□□□□□ -1.12
VCP-205ENST00000479300 RIOK1Q9BRS2 568 aaKnown RBP8.04□□□□□ -1.12
VCP-205ENST00000479300 CCDC8Q9H0W5 538 aaPredicted RBP8.04□□□□□ -1.12
VCP-205ENST00000479300 RCAN3Q9UKA8 241 aa8.04□□□□□ -1.12
VCP-205ENST00000479300 NAV1Q8NEY1 1877 aa8.04□□□□□ -1.12
VCP-205ENST00000479300 NCOR1O75376 2440 aa8.03□□□□□ -1.12
VCP-205ENST00000479300 TMEM265A0A087WTH1 108 aa8.03□□□□□ -1.12
VCP-205ENST00000479300 APBB1O00213 710 aa8.03□□□□□ -1.12
VCP-205ENST00000479300 TNFRSF10AO00220 468 aa8.03□□□□□ -1.12
VCP-205ENST00000479300 STRNO43815 780 aa8.03□□□□□ -1.12
VCP-205ENST00000479300 GTPBP6O43824 516 aaPredicted RBP8.03□□□□□ -1.12
VCP-205ENST00000479300 IDH1O75874 414 aaKnown RBP8.03□□□□□ -1.12
VCP-205ENST00000479300 PGK1P00558 417 aa8.03□□□□□ -1.12
VCP-205ENST00000479300 CLTBP09497 229 aa8.03□□□□□ -1.12
VCP-205ENST00000479300 IFIT2P09913 472 aaKnown RBP8.03□□□□□ -1.12
VCP-205ENST00000479300 CYP2D6P10635 497 aa8.03□□□□□ -1.12
VCP-205ENST00000479300 RLBP1P12271 317 aa8.03□□□□□ -1.12
VCP-205ENST00000479300 PBX2P40425 430 aa8.03□□□□□ -1.12
VCP-205ENST00000479300 IRX5P78411 483 aaPredicted RBP8.03□□□□□ -1.12
VCP-205ENST00000479300 FAAP100Q0VG06 881 aa8.03□□□□□ -1.12
VCP-205ENST00000479300 MAP3K12Q12852 859 aa8.03□□□□□ -1.12
VCP-205ENST00000479300 ADGRE1Q14246 886 aa8.03□□□□□ -1.12
VCP-205ENST00000479300 COG2Q14746 738 aa8.03□□□□□ -1.12
VCP-205ENST00000479300 TTF1Q15361 905 aaPredicted RBP8.03□□□□□ -1.12
VCP-205ENST00000479300 TJAP1Q5JTD0 557 aa8.03□□□□□ -1.12
VCP-205ENST00000479300 CEP85Q6P2H3 762 aa8.03□□□□□ -1.12
VCP-205ENST00000479300 AACSQ86V21 672 aa8.03□□□□□ -1.12
VCP-205ENST00000479300 MAGEB6Q8N7X4 407 aa8.03□□□□□ -1.12
VCP-205ENST00000479300 SLC44A5Q8NCS7 719 aa8.03□□□□□ -1.12
VCP-205ENST00000479300 SHCBP1Q8NEM2 672 aa8.03□□□□□ -1.12
VCP-205ENST00000479300 EAF2Q96CJ1 260 aaPredicted RBP8.03□□□□□ -1.12
VCP-205ENST00000479300 ATG4CQ96DT6 458 aa8.03□□□□□ -1.12
VCP-205ENST00000479300 EXOC6BQ9Y2D4 811 aa8.03□□□□□ -1.12
VCP-205ENST00000479300 ZNFX1Q9P2E3 1918 aaKnown RBP8.03□□□□□ -1.12
VCP-205ENST00000479300 COL11A1P12107 1806 aaPredicted RBP8.03□□□□□ -1.12
VCP-205ENST00000479300 ROBO3Q96MS0 1386 aa8.02□□□□□ -1.13
VCP-205ENST00000479300 A0A1W2PQ45 241 aaPredicted RBP8.02□□□□□ -1.13
VCP-205ENST00000479300 A0A1W2PQY0 241 aa8.02□□□□□ -1.13
VCP-205ENST00000479300 GRXCR1A8MXD5 290 aa8.02□□□□□ -1.13
VCP-205ENST00000479300 PQBP1O60828 265 aaKnown RBP8.02□□□□□ -1.13
VCP-205ENST00000479300 RAB11FIP3O75154 756 aa8.02□□□□□ -1.13
VCP-205ENST00000479300 ADAMTS4O75173 837 aa8.02□□□□□ -1.13
VCP-205ENST00000479300 PGK2P07205 417 aa8.02□□□□□ -1.13
VCP-205ENST00000479300 ZNF865P0CJ78 1059 aaPredicted RBP8.02□□□□□ -1.13
VCP-205ENST00000479300 ANP32AP39687 249 aaKnown RBP8.02□□□□□ -1.13
VCP-205ENST00000479300 USP5P45974 858 aa8.02□□□□□ -1.13
VCP-205ENST00000479300 TMEM132BQ14DG7 1078 aa8.02□□□□□ -1.13
VCP-205ENST00000479300 RASIP1Q5U651 963 aa8.02□□□□□ -1.13
VCP-205ENST00000479300 CCSAPQ6IQ19 270 aaPredicted RBP8.02□□□□□ -1.13
VCP-205ENST00000479300 TMED8Q6PL24 325 aaPredicted RBP8.02□□□□□ -1.13
VCP-205ENST00000479300 ABRAQ8N0Z2 381 aa8.02□□□□□ -1.13
VCP-205ENST00000479300 SYMPKQ92797 1274 aaKnown RBP8.02□□□□□ -1.13
VCP-205ENST00000479300 KIF1BPQ96EK5 621 aa8.02□□□□□ -1.13
VCP-205ENST00000479300 FAM212AQ96EL1 285 aa8.02□□□□□ -1.13
VCP-205ENST00000479300 CCDC136Q96JN2 1154 aa8.02□□□□□ -1.13
VCP-205ENST00000479300 IPO9Q96P70 1041 aaKnown RBP8.02□□□□□ -1.13
VCP-205ENST00000479300 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.02□□□□□ -1.132e-10■□□□□ 8.6
VCP-205ENST00000479300 TANGO6Q9C0B7 1094 aa8.02□□□□□ -1.13
VCP-205ENST00000479300 ZNF576Q9H609 170 aa8.02□□□□□ -1.13
VCP-205ENST00000479300 XPNPEP3Q9NQH7 507 aa8.02□□□□□ -1.13
VCP-205ENST00000479300 TBX21Q9UL17 535 aa8.02□□□□□ -1.13
VCP-205ENST00000479300 COG6Q9Y2V7 657 aa8.02□□□□□ -1.13
VCP-205ENST00000479300 TACC3Q9Y6A5 838 aa8.02□□□□□ -1.13
VCP-205ENST00000479300 PLXNA1Q9UIW2 1896 aa8.02□□□□□ -1.13
VCP-205ENST00000479300 XIRP2A4UGR9 3374 aa8.02□□□□□ -1.13
VCP-205ENST00000479300 TRANK1O15050 2925 aa8.02□□□□□ -1.13
VCP-205ENST00000479300 MYADML2A6NDP7 307 aa8.01□□□□□ -1.13
VCP-205ENST00000479300 ADCY6O43306 1168 aa8.01□□□□□ -1.13
VCP-205ENST00000479300 PYGBP11216 843 aa8.01□□□□□ -1.13
VCP-205ENST00000479300 RAG1P15918 1043 aa8.01□□□□□ -1.13
VCP-205ENST00000479300 FPGSQ05932 587 aa8.01□□□□□ -1.13
VCP-205ENST00000479300 NBR1Q14596 966 aa8.01□□□□□ -1.13
VCP-205ENST00000479300 ZNF792Q3KQV3 632 aa8.01□□□□□ -1.13
VCP-205ENST00000479300 ANKRD33Q7Z3H0 272 aa8.01□□□□□ -1.13
VCP-205ENST00000479300 TTC6Q86TZ1 520 aa8.01□□□□□ -1.13
VCP-205ENST00000479300 NCAPG2Q86XI2 1143 aa8.01□□□□□ -1.13
VCP-205ENST00000479300 SPICE1Q8N0Z3 855 aa8.01□□□□□ -1.13
VCP-205ENST00000479300 IL27Q8NEV9 243 aa8.01□□□□□ -1.13
VCP-205ENST00000479300 REPS2Q8NFH8 660 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms