RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 CCDC69A6NI79 296 aa17.94■□□□□ 0.46
SEC13-215ENST00000477547 GPR25O00155 361 aa17.94■□□□□ 0.46
SEC13-215ENST00000477547 LIFRP42702 1097 aa17.94■□□□□ 0.46
SEC13-215ENST00000477547 SREBF2Q12772 1141 aa17.94■□□□□ 0.46
SEC13-215ENST00000477547 RABEP1Q15276 862 aa17.94■□□□□ 0.46
SEC13-215ENST00000477547 FBXO46Q6PJ61 603 aaPredicted RBP17.94■□□□□ 0.46
SEC13-215ENST00000477547 BRF1Q92994 677 aa17.94■□□□□ 0.46
SEC13-215ENST00000477547 F5H6K3 240 aa17.93■□□□□ 0.46
SEC13-215ENST00000477547 WDR46O15213 610 aaKnown RBP17.93■□□□□ 0.46
SEC13-215ENST00000477547 NEK4P51957 841 aa17.93■□□□□ 0.46
SEC13-215ENST00000477547 KLRC3Q07444 240 aa17.93■□□□□ 0.46
SEC13-215ENST00000477547 MOGSQ13724 837 aa17.93■□□□□ 0.46
SEC13-215ENST00000477547 CCDC96Q2M329 555 aa17.93■□□□□ 0.46
SEC13-215ENST00000477547 KIAA1755Q5JYT7 1200 aa17.93■□□□□ 0.46
SEC13-215ENST00000477547 SLFN13Q68D06 897 aa17.93■□□□□ 0.46
SEC13-215ENST00000477547 FASTKD5Q7L8L6 764 aaKnown RBP17.93■□□□□ 0.46
SEC13-215ENST00000477547 ZNF654Q8IZM8 581 aa17.93■□□□□ 0.46
SEC13-215ENST00000477547 CHMP4CQ96CF2 233 aa17.93■□□□□ 0.46
SEC13-215ENST00000477547 R3HDMLQ9H3Y0 253 aa17.93■□□□□ 0.46
SEC13-215ENST00000477547 AGTPBP1Q9UPW5 1226 aa17.93■□□□□ 0.46
SEC13-215ENST00000477547 DDAH1O94760 285 aa17.92■□□□□ 0.46
SEC13-215ENST00000477547 TOB2Q14106 344 aaPredicted RBP17.92■□□□□ 0.46
SEC13-215ENST00000477547 FAM83BQ5T0W9 1011 aa17.92■□□□□ 0.46
SEC13-215ENST00000477547 TREML2Q5T2D2 321 aa17.92■□□□□ 0.46
SEC13-215ENST00000477547 CATIPQ7Z7H3 387 aa17.92■□□□□ 0.46
SEC13-215ENST00000477547 SGMS1Q86VZ5 419 aa17.92■□□□□ 0.46
SEC13-215ENST00000477547 DCAF4Q8WV16 495 aa17.92■□□□□ 0.46
SEC13-215ENST00000477547 GMCL1Q96IK5 515 aa17.92■□□□□ 0.46
SEC13-215ENST00000477547 NUP88Q99567 741 aaPredicted RBP17.92■□□□□ 0.46
SEC13-215ENST00000477547 AGXT2Q9BYV1 514 aa17.92■□□□□ 0.46
SEC13-215ENST00000477547 TANGO6Q9C0B7 1094 aa17.92■□□□□ 0.46
SEC13-215ENST00000477547 RPAP3Q9H6T3 665 aaPredicted RBP17.92■□□□□ 0.46
SEC13-215ENST00000477547 RBBP6Q7Z6E9 1792 aaKnown RBP17.91■□□□□ 0.46
SEC13-215ENST00000477547 KLF18A0A0U1RQI7 1052 aa17.91■□□□□ 0.46
SEC13-215ENST00000477547 TESPA1A2RU30 521 aaPredicted RBP17.91■□□□□ 0.46
SEC13-215ENST00000477547 GOLGA8BA8MQT2 603 aa17.91■□□□□ 0.46
SEC13-215ENST00000477547 PDHBP11177 359 aa17.91■□□□□ 0.46
SEC13-215ENST00000477547 SLC1A4P43007 532 aa17.91■□□□□ 0.46
SEC13-215ENST00000477547 APOBRQ0VD83 1088 aa17.91■□□□□ 0.46
SEC13-215ENST00000477547 APOA5Q6Q788 366 aa17.91■□□□□ 0.46
SEC13-215ENST00000477547 MICU3Q86XE3 530 aa17.91■□□□□ 0.46
SEC13-215ENST00000477547 TMTC2Q8N394 836 aa17.91■□□□□ 0.46
SEC13-215ENST00000477547 FBXL16Q8N461 479 aa17.91■□□□□ 0.46
SEC13-215ENST00000477547 MYL10Q9BUA6 226 aa17.91■□□□□ 0.46
SEC13-215ENST00000477547 NAP1L2Q9ULW6 460 aaPredicted RBP17.91■□□□□ 0.46
SEC13-215ENST00000477547 SLC12A7Q9Y666 1083 aa17.91■□□□□ 0.46
SEC13-215ENST00000477547 FRMPD2Q68DX3 1309 aaPredicted RBP17.9■□□□□ 0.46
SEC13-215ENST00000477547 BTBD19C9JJ37 291 aa17.9■□□□□ 0.46
SEC13-215ENST00000477547 IGF2BP3O00425 579 aaKnown RBP eCLIP17.9■□□□□ 0.46
SEC13-215ENST00000477547 TM4SF4P48230 202 aa17.9■□□□□ 0.46
SEC13-215ENST00000477547 AK2P54819 239 aa17.9■□□□□ 0.46
SEC13-215ENST00000477547 NOL8Q76FK4 1167 aaKnown RBP17.9■□□□□ 0.46
SEC13-215ENST00000477547 ANKRD23Q86SG2 305 aa17.9■□□□□ 0.46
SEC13-215ENST00000477547 RAB11FIP4Q86YS3 637 aa17.9■□□□□ 0.46
SEC13-215ENST00000477547 NUP133Q8WUM0 1156 aa17.9■□□□□ 0.46
SEC13-215ENST00000477547 BAZ2BQ9UIF8 2168 aaKnown RBP17.89■□□□□ 0.45
SEC13-215ENST00000477547 POTEFA5A3E0 1075 aa17.89■□□□□ 0.45
SEC13-215ENST00000477547 BMP3P12645 472 aa17.89■□□□□ 0.45
SEC13-215ENST00000477547 INHBEP58166 350 aa17.89■□□□□ 0.45
SEC13-215ENST00000477547 IRX3P78415 501 aaPredicted RBP17.89■□□□□ 0.45
SEC13-215ENST00000477547 PABPC4Q13310 644 aaKnown RBP eCLIP17.89■□□□□ 0.451e-8■□□□□ 8.5
SEC13-215ENST00000477547 ANKRD1Q15327 319 aa17.89■□□□□ 0.45
SEC13-215ENST00000477547 GPAT2Q6NUI2 795 aa17.89■□□□□ 0.45
SEC13-215ENST00000477547 SYNE3Q6ZMZ3 975 aa17.89■□□□□ 0.45
SEC13-215ENST00000477547 FAM43AQ8N2R8 423 aa17.89■□□□□ 0.45
SEC13-215ENST00000477547 BRPF3Q9ULD4 1205 aa17.89■□□□□ 0.45
SEC13-215ENST00000477547 PDHXO00330 501 aa17.88■□□□□ 0.45
SEC13-215ENST00000477547 ZBTB43O43298 467 aa17.88■□□□□ 0.45
SEC13-215ENST00000477547 ST18O60284 1047 aa17.88■□□□□ 0.45
SEC13-215ENST00000477547 FKTNO75072 461 aa17.88■□□□□ 0.45
SEC13-215ENST00000477547 PARP1P09874 1014 aaKnown RBP17.88■□□□□ 0.45
SEC13-215ENST00000477547 CALM1P0DP23 149 aa17.88■□□□□ 0.45
SEC13-215ENST00000477547 CALM2P0DP24 149 aa17.88■□□□□ 0.45
SEC13-215ENST00000477547 CALM3P0DP25 149 aa17.88■□□□□ 0.45
SEC13-215ENST00000477547 SNHG28P0DPA3 235 aa17.88■□□□□ 0.45
SEC13-215ENST00000477547 RXRAP19793 462 aa17.88■□□□□ 0.45
SEC13-215ENST00000477547 ZNF543Q08ER8 600 aa17.88■□□□□ 0.45
SEC13-215ENST00000477547 TROAPQ12815 778 aa17.88■□□□□ 0.45
SEC13-215ENST00000477547 IKQ13123 557 aaPredicted RBP17.88■□□□□ 0.45
SEC13-215ENST00000477547 GRM4Q14833 912 aa17.88■□□□□ 0.45
SEC13-215ENST00000477547 ASPRV1Q53RT3 343 aa17.88■□□□□ 0.45
SEC13-215ENST00000477547 KCTD1Q719H9 257 aa17.88■□□□□ 0.45
SEC13-215ENST00000477547 IFNL1Q8IU54 200 aa17.88■□□□□ 0.45
SEC13-215ENST00000477547 CTCFLQ8NI51 663 aaPredicted RBP17.88■□□□□ 0.45
SEC13-215ENST00000477547 PTPN18Q99952 460 aa17.88■□□□□ 0.45
SEC13-215ENST00000477547 PNMA3Q9UL41 463 aa17.88■□□□□ 0.45
SEC13-215ENST00000477547 SLC45A1Q9Y2W3 748 aa17.88■□□□□ 0.45
SEC13-215ENST00000477547 HTTP42858 3142 aa17.88■□□□□ 0.45
SEC13-215ENST00000477547 NID2Q14112 1375 aa17.87■□□□□ 0.45
SEC13-215ENST00000477547 GOLGA8AA7E2F4 631 aa17.87■□□□□ 0.45
SEC13-215ENST00000477547 USP17L15C9J2P7 530 aa17.87■□□□□ 0.45
SEC13-215ENST00000477547 USP17L13C9JLJ4 530 aa17.87■□□□□ 0.45
SEC13-215ENST00000477547 USP17L11C9JVI0 530 aa17.87■□□□□ 0.45
SEC13-215ENST00000477547 USP17L18D6R9N7 530 aa17.87■□□□□ 0.45
SEC13-215ENST00000477547 USP17L22D6RA61 530 aa17.87■□□□□ 0.45
SEC13-215ENST00000477547 USP17L17D6RBQ6 530 aa17.87■□□□□ 0.45
SEC13-215ENST00000477547 USP17L19D6RCP7 530 aa17.87■□□□□ 0.45
SEC13-215ENST00000477547 USP17L20D6RJB6 530 aa17.87■□□□□ 0.45
SEC13-215ENST00000477547 FLOT1O75955 427 aa17.87■□□□□ 0.45
SEC13-215ENST00000477547 USP17L24Q0WX57 530 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms