RNA–Protein interactions for RNA: ENST00000475732.1

DMD-223, Transcript of dystrophin, human

TSL 5

Gene DMD, Length 669 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DMD-223	ENST00000475732	HOXA7	P31268	230 aa	Predicted RBP	11.77	□□□□□ -0.53
DMD-223	ENST00000475732	KLRC3	Q07444	240 aa		11.77	□□□□□ -0.53
DMD-223	ENST00000475732	TAF1C	Q15572	869 aa	Predicted RBP	11.77	□□□□□ -0.53
DMD-223	ENST00000475732	ADCK5	Q3MIX3	580 aa		11.77	□□□□□ -0.53
DMD-223	ENST00000475732	RCSD1	Q6JBY9	416 aa		11.77	□□□□□ -0.53
DMD-223	ENST00000475732	SPICE1	Q8N0Z3	855 aa		11.77	□□□□□ -0.53
DMD-223	ENST00000475732	LRRC47	Q8N1G4	583 aa	Known RBP	11.77	□□□□□ -0.53
DMD-223	ENST00000475732	ENAH	Q8N8S7	591 aa	Predicted RBP	11.77	□□□□□ -0.53
DMD-223	ENST00000475732	GMCL1P1	Q8NEA9	526 aa		11.77	□□□□□ -0.53
DMD-223	ENST00000475732	TMEM47	Q9BQJ4	181 aa		11.77	□□□□□ -0.53
DMD-223	ENST00000475732	MTA3	Q9BTC8	594 aa		11.77	□□□□□ -0.53
DMD-223	ENST00000475732	SAGE1	Q9NXZ1	904 aa		11.77	□□□□□ -0.53
DMD-223	ENST00000475732	PNMA3	Q9UL41	463 aa		11.77	□□□□□ -0.53
DMD-223	ENST00000475732	USP17L15	C9J2P7	530 aa		11.76	□□□□□ -0.53
DMD-223	ENST00000475732	USP17L13	C9JLJ4	530 aa		11.76	□□□□□ -0.53
DMD-223	ENST00000475732	USP17L11	C9JVI0	530 aa		11.76	□□□□□ -0.53
DMD-223	ENST00000475732	USP17L18	D6R9N7	530 aa		11.76	□□□□□ -0.53
DMD-223	ENST00000475732	USP17L22	D6RA61	530 aa		11.76	□□□□□ -0.53
DMD-223	ENST00000475732	USP17L17	D6RBQ6	530 aa		11.76	□□□□□ -0.53
DMD-223	ENST00000475732	USP17L19	D6RCP7	530 aa		11.76	□□□□□ -0.53
DMD-223	ENST00000475732	USP17L20	D6RJB6	530 aa		11.76	□□□□□ -0.53
DMD-223	ENST00000475732	WDR46	O15213	610 aa	Known RBP	11.76	□□□□□ -0.53
DMD-223	ENST00000475732	PRC1	O43663	620 aa		11.76	□□□□□ -0.53
DMD-223	ENST00000475732	OSBP	P22059	807 aa		11.76	□□□□□ -0.53
DMD-223	ENST00000475732	ANTXR2	P58335	489 aa		11.76	□□□□□ -0.53
DMD-223	ENST00000475732	IRX3	P78415	501 aa	Predicted RBP	11.76	□□□□□ -0.53
DMD-223	ENST00000475732	USP17L24	Q0WX57	530 aa		11.76	□□□□□ -0.53
DMD-223	ENST00000475732	KIAA1755	Q5JYT7	1200 aa		11.76	□□□□□ -0.53
DMD-223	ENST00000475732	IFIT1B	Q5T764	474 aa	Known RBP	11.76	□□□□□ -0.53
DMD-223	ENST00000475732	CHST3	Q7LGC8	479 aa		11.76	□□□□□ -0.53
DMD-223	ENST00000475732	ANKS1A	Q92625	1134 aa		11.76	□□□□□ -0.53
DMD-223	ENST00000475732	JAKMIP1	Q96N16	626 aa	Known RBP	11.76	□□□□□ -0.53
DMD-223	ENST00000475732	PARK7	Q99497	189 aa	Known RBP	11.76	□□□□□ -0.53
DMD-223	ENST00000475732	CFHR5	Q9BXR6	569 aa		11.76	□□□□□ -0.53
DMD-223	ENST00000475732	RPAP3	Q9H6T3	665 aa	Predicted RBP	11.76	□□□□□ -0.53
DMD-223	ENST00000475732	KAT14	Q9H8E8	782 aa		11.76	□□□□□ -0.53
DMD-223	ENST00000475732	ZFYVE28	Q9HCC9	887 aa		11.76	□□□□□ -0.53
DMD-223	ENST00000475732	PARP14	Q460N5	1801 aa		11.75	□□□□□ -0.53
DMD-223	ENST00000475732	NDUFB10	O96000	172 aa		11.75	□□□□□ -0.53
DMD-223	ENST00000475732	ANAPC15	P60006	121 aa		11.75	□□□□□ -0.53
DMD-223	ENST00000475732	WTAP	Q15007	396 aa		11.75	□□□□□ -0.53
DMD-223	ENST00000475732	SEC23A	Q15436	765 aa		11.75	□□□□□ -0.53
DMD-223	ENST00000475732	TMEM67	Q5HYA8	995 aa		11.75	□□□□□ -0.53
DMD-223	ENST00000475732	SLFN13	Q68D06	897 aa		11.75	□□□□□ -0.53
DMD-223	ENST00000475732	BLOC1S2	Q6QNY1	142 aa		11.75	□□□□□ -0.53
DMD-223	ENST00000475732	CATSPERG	Q6ZRH7	1159 aa		11.75	□□□□□ -0.53
DMD-223	ENST00000475732	DHX32	Q7L7V1	743 aa	Known RBP	11.75	□□□□□ -0.53
DMD-223	ENST00000475732	IGDCC4	Q8TDY8	1250 aa		11.75	□□□□□ -0.53
DMD-223	ENST00000475732	TMEM87B	Q96K49	555 aa		11.75	□□□□□ -0.53
DMD-223	ENST00000475732	TANGO6	Q9C0B7	1094 aa		11.75	□□□□□ -0.53
DMD-223	ENST00000475732	ASCC2	Q9H1I8	757 aa	Predicted RBP	11.75	□□□□□ -0.53
DMD-223	ENST00000475732	UPF2	Q9HAU5	1272 aa	Known RBP	11.75	□□□□□ -0.53
DMD-223	ENST00000475732	WDR19	Q8NEZ3	1342 aa		11.75	□□□□□ -0.53
DMD-223	ENST00000475732	TBC1D8	O95759	1140 aa		11.74	□□□□□ -0.53
DMD-223	ENST00000475732	CYP2C8	P10632	490 aa		11.74	□□□□□ -0.53
DMD-223	ENST00000475732	BMP3	P12645	472 aa		11.74	□□□□□ -0.53
DMD-223	ENST00000475732	CAST	P20810	708 aa	Known RBP	11.74	□□□□□ -0.53
DMD-223	ENST00000475732	SLC1A4	P43007	532 aa		11.74	□□□□□ -0.53
DMD-223	ENST00000475732	EXOSC10	Q01780	885 aa	Known RBP	11.74	□□□□□ -0.53
DMD-223	ENST00000475732	CRHR2	Q13324	411 aa		11.74	□□□□□ -0.53
DMD-223	ENST00000475732	FAM83B	Q5T0W9	1011 aa		11.74	□□□□□ -0.53
DMD-223	ENST00000475732	TMTC2	Q8N394	836 aa		11.74	□□□□□ -0.53
DMD-223	ENST00000475732	PNMA1	Q8ND90	353 aa		11.74	□□□□□ -0.53
DMD-223	ENST00000475732	SMCR8	Q8TEV9	937 aa	Predicted RBP	11.74	□□□□□ -0.53
DMD-223	ENST00000475732	DCAF4	Q8WV16	495 aa		11.74	□□□□□ -0.53
DMD-223	ENST00000475732	GMCL1	Q96IK5	515 aa		11.74	□□□□□ -0.53
DMD-223	ENST00000475732	TM6SF1	Q9BZW5	370 aa		11.74	□□□□□ -0.53
DMD-223	ENST00000475732	MTMR7	Q9Y216	660 aa		11.74	□□□□□ -0.53
DMD-223	ENST00000475732	RLF	Q13129	1914 aa		11.74	□□□□□ -0.53
DMD-223	ENST00000475732	SH2B2	O14492	632 aa	Predicted RBP	11.73	□□□□□ -0.53
DMD-223	ENST00000475732	TLR2	O60603	784 aa		11.73	□□□□□ -0.53
DMD-223	ENST00000475732	FLOT1	O75955	427 aa		11.73	□□□□□ -0.53
DMD-223	ENST00000475732	HSPA1A	P0DMV8	641 aa	Known RBP	11.73	□□□□□ -0.53
DMD-223	ENST00000475732	HSPA1B	P0DMV9	641 aa	Known RBP	11.73	□□□□□ -0.53
DMD-223	ENST00000475732	LIFR	P42702	1097 aa		11.73	□□□□□ -0.53
DMD-223	ENST00000475732	COL9A3	Q14050	684 aa	Predicted RBP	11.73	□□□□□ -0.53
DMD-223	ENST00000475732	COG2	Q14746	738 aa		11.73	□□□□□ -0.53
DMD-223	ENST00000475732	RUFY3	Q7L099	469 aa		11.73	□□□□□ -0.53
DMD-223	ENST00000475732	NUP88	Q99567	741 aa	Predicted RBP	11.73	□□□□□ -0.53
DMD-223	ENST00000475732	P2RX7	Q99572	595 aa	Known RBP	11.73	□□□□□ -0.53
DMD-223	ENST00000475732	LRRC2	Q9BYS8	371 aa		11.73	□□□□□ -0.53
DMD-223	ENST00000475732	BACH2	Q9BYV9	841 aa		11.73	□□□□□ -0.53
DMD-223	ENST00000475732	LY9	Q9HBG7	655 aa		11.73	□□□□□ -0.53
DMD-223	ENST00000475732	ZSWIM6	Q9HCJ5	1215 aa		11.73	□□□□□ -0.53
DMD-223	ENST00000475732	HOXC10	Q9NYD6	342 aa		11.73	□□□□□ -0.53
DMD-223	ENST00000475732	ISY1	Q9ULR0	285 aa	Known RBP	11.73	□□□□□ -0.53
DMD-223	ENST00000475732	CYP46A1	Q9Y6A2	500 aa		11.73	□□□□□ -0.53
DMD-223	ENST00000475732	CCDC69	A6NI79	296 aa		11.72	□□□□□ -0.53
DMD-223	ENST00000475732	PDHB	P11177	359 aa		11.72	□□□□□ -0.53
DMD-223	ENST00000475732	CPA1	P15085	419 aa		11.72	□□□□□ -0.53
DMD-223	ENST00000475732	RPS6KB1	P23443	525 aa		11.72	□□□□□ -0.53
DMD-223	ENST00000475732	GCLC	P48506	637 aa	Predicted RBP	11.72	□□□□□ -0.53
DMD-223	ENST00000475732	HERVK_113	P62684	666 aa		11.72	□□□□□ -0.53
DMD-223	ENST00000475732	FGD1	P98174	961 aa		11.72	□□□□□ -0.53
DMD-223	ENST00000475732	GSE1	Q14687	1217 aa		11.72	□□□□□ -0.53
DMD-223	ENST00000475732	CCDC96	Q2M329	555 aa		11.72	□□□□□ -0.53
DMD-223	ENST00000475732	NFXL1	Q6ZNB6	911 aa		11.72	□□□□□ -0.53
DMD-223	ENST00000475732	CATIP	Q7Z7H3	387 aa		11.72	□□□□□ -0.53
DMD-223	ENST00000475732	GTF3C2	Q8WUA4	911 aa	Predicted RBP	11.72	□□□□□ -0.53
DMD-223	ENST00000475732	CHMP4C	Q96CF2	233 aa		11.72	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms