RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 SOGA3Q5TF21 947 aa8.71□□□□□ -1.02
TM9SF3-204ENST00000475401 HEATR6Q6AI08 1181 aaKnown RBP8.71□□□□□ -1.02
TM9SF3-204ENST00000475401 KIAA1211LQ6NV74 962 aa8.71□□□□□ -1.02
TM9SF3-204ENST00000475401 AGBL5Q8NDL9 886 aa8.71□□□□□ -1.02
TM9SF3-204ENST00000475401 SYTL4Q96C24 671 aaPredicted RBP8.71□□□□□ -1.02
TM9SF3-204ENST00000475401 GBP3Q9H0R5 595 aa8.71□□□□□ -1.02
TM9SF3-204ENST00000475401 ANKRD39Q53RE8 183 aa8.7□□□□□ -1.02
TM9SF3-204ENST00000475401 AXDND1Q5T1B0 1012 aaPredicted RBP8.7□□□□□ -1.02
TM9SF3-204ENST00000475401 NBPF11Q86T75 865 aa8.7□□□□□ -1.02
TM9SF3-204ENST00000475401 TSPYL5Q86VY4 417 aaPredicted RBP8.7□□□□□ -1.02
TM9SF3-204ENST00000475401 PPFIBP1Q86W92 1011 aa8.7□□□□□ -1.02
TM9SF3-204ENST00000475401 HNRNPLLQ8WVV9 542 aaKnown RBP8.7□□□□□ -1.02
TM9SF3-204ENST00000475401 DHX38Q92620 1227 aaKnown RBP8.7□□□□□ -1.02
TM9SF3-204ENST00000475401 DSCC1Q9BVC3 393 aa8.7□□□□□ -1.02
TM9SF3-204ENST00000475401 PRDM14Q9GZV8 571 aa8.7□□□□□ -1.02
TM9SF3-204ENST00000475401 DUSP15Q9H1R2 295 aaPredicted RBP8.7□□□□□ -1.02
TM9SF3-204ENST00000475401 ATP13A1Q9HD20 1204 aa8.7□□□□□ -1.02
TM9SF3-204ENST00000475401 SEMA3GQ9NS98 782 aa8.7□□□□□ -1.02
TM9SF3-204ENST00000475401 PRR13Q9NZ81 148 aa8.7□□□□□ -1.02
TM9SF3-204ENST00000475401 DUSP13Q9UII6 198 aa8.7□□□□□ -1.02
TM9SF3-204ENST00000475401 SSU72P8A0A1W2PR75 194 aa8.69□□□□□ -1.02
TM9SF3-204ENST00000475401 ITGA4P13612 1032 aa8.69□□□□□ -1.02
TM9SF3-204ENST00000475401 LTKP29376 864 aa8.69□□□□□ -1.02
TM9SF3-204ENST00000475401 DCAF15Q66K64 600 aa8.69□□□□□ -1.02
TM9SF3-204ENST00000475401 ADAT2Q7Z6V5 191 aaKnown RBP8.69□□□□□ -1.02
TM9SF3-204ENST00000475401 SYTL5Q8TDW5 730 aaPredicted RBP8.69□□□□□ -1.02
TM9SF3-204ENST00000475401 HAUS7Q99871 368 aa8.69□□□□□ -1.02
TM9SF3-204ENST00000475401 SIGLEC6O43699 453 aa8.68□□□□□ -1.02
TM9SF3-204ENST00000475401 PPM1BO75688 479 aa8.68□□□□□ -1.02
TM9SF3-204ENST00000475401 SRFP11831 508 aa8.68□□□□□ -1.02
TM9SF3-204ENST00000475401 NBPF6Q5VWK0 638 aa8.68□□□□□ -1.02
TM9SF3-204ENST00000475401 CREG2Q8IUH2 290 aa8.68□□□□□ -1.02
TM9SF3-204ENST00000475401 FAM178BQ8IXR5 827 aa8.68□□□□□ -1.02
TM9SF3-204ENST00000475401 ZNF655Q8N720 491 aaPredicted RBP8.68□□□□□ -1.02
TM9SF3-204ENST00000475401 DAGLBQ8NCG7 672 aa8.68□□□□□ -1.02
TM9SF3-204ENST00000475401 NBPF4Q96M43 638 aa8.68□□□□□ -1.02
TM9SF3-204ENST00000475401 CHST7Q9NS84 486 aa8.68□□□□□ -1.02
TM9SF3-204ENST00000475401 GFOD1Q9NXC2 390 aa8.68□□□□□ -1.02
TM9SF3-204ENST00000475401 LMCD1Q9NZU5 365 aa8.68□□□□□ -1.02
TM9SF3-204ENST00000475401 CD8BP10966 210 aa8.67□□□□□ -1.02
TM9SF3-204ENST00000475401 CD247P20963 164 aa8.67□□□□□ -1.02
TM9SF3-204ENST00000475401 ZP2Q05996 745 aa8.67□□□□□ -1.02
TM9SF3-204ENST00000475401 SNW1Q13573 536 aaKnown RBP8.67□□□□□ -1.02
TM9SF3-204ENST00000475401 PLCL1Q15111 1095 aa8.67□□□□□ -1.02
TM9SF3-204ENST00000475401 CWF19L1Q69YN2 538 aaKnown RBP8.67□□□□□ -1.02
TM9SF3-204ENST00000475401 C6orf15Q6UXA7 325 aaPredicted RBP8.67□□□□□ -1.02
TM9SF3-204ENST00000475401 TMC3Q7Z5M5 1100 aa8.67□□□□□ -1.02
TM9SF3-204ENST00000475401 GP6Q9HCN6 339 aa8.67□□□□□ -1.02
TM9SF3-204ENST00000475401 WHRNQ9P202 907 aa8.67□□□□□ -1.02
TM9SF3-204ENST00000475401 SUGT1Q9Y2Z0 365 aa8.67□□□□□ -1.02
TM9SF3-204ENST00000475401 SHISA3A0PJX4 238 aa8.66□□□□□ -1.02
TM9SF3-204ENST00000475401 ANKRD34BA5PLL1 514 aa8.66□□□□□ -1.02
TM9SF3-204ENST00000475401 KLF4O43474 513 aa8.66□□□□□ -1.02
TM9SF3-204ENST00000475401 PRAMEF1O95521 474 aa8.66□□□□□ -1.02
TM9SF3-204ENST00000475401 CD96P40200 585 aa8.66□□□□□ -1.02
TM9SF3-204ENST00000475401 ZNF143P52747 638 aaPredicted RBP8.66□□□□□ -1.02
TM9SF3-204ENST00000475401 PCBP3P57721 371 aaKnown RBP8.66□□□□□ -1.02
TM9SF3-204ENST00000475401 RAB33AQ14088 237 aa8.66□□□□□ -1.02
TM9SF3-204ENST00000475401 ZNF574Q6ZN55 896 aaPredicted RBP8.66□□□□□ -1.02
TM9SF3-204ENST00000475401 SPRED2Q7Z698 418 aa8.66□□□□□ -1.02
TM9SF3-204ENST00000475401 UBXN4Q92575 508 aa8.66□□□□□ -1.02
TM9SF3-204ENST00000475401 APBA2Q99767 749 aa8.66□□□□□ -1.02
TM9SF3-204ENST00000475401 SF3B6Q9Y3B4 125 aaKnown RBP8.66□□□□□ -1.02
TM9SF3-204ENST00000475401 MEIS1O00470 390 aa8.65□□□□□ -1.02
TM9SF3-204ENST00000475401 EPHX1P07099 455 aa8.65□□□□□ -1.02
TM9SF3-204ENST00000475401 PI4K2BQ8TCG2 481 aa8.65□□□□□ -1.02
TM9SF3-204ENST00000475401 KLHL6Q8WZ60 621 aa8.65□□□□□ -1.02
TM9SF3-204ENST00000475401 CCDC120Q96HB5 630 aa8.65□□□□□ -1.02
TM9SF3-204ENST00000475401 HDAC8Q9BY41 377 aa8.65□□□□□ -1.02
TM9SF3-204ENST00000475401 CARS2Q9HA77 564 aaKnown RBP8.65□□□□□ -1.02
TM9SF3-204ENST00000475401 PAK6Q9NQU5 681 aaPredicted RBP8.65□□□□□ -1.02
TM9SF3-204ENST00000475401 ST7Q9NRC1 585 aa8.65□□□□□ -1.02
TM9SF3-204ENST00000475401 ZNF451Q9Y4E5 1061 aa8.65□□□□□ -1.02
TM9SF3-204ENST00000475401 FHOD1Q9Y613 1164 aa8.65□□□□□ -1.02
TM9SF3-204ENST00000475401 A0A087WZG4 1122 aa8.64□□□□□ -1.03
TM9SF3-204ENST00000475401 FUT4P22083 530 aa8.64□□□□□ -1.03
TM9SF3-204ENST00000475401 GP2P55259 537 aaKnown RBP8.64□□□□□ -1.03
TM9SF3-204ENST00000475401 EGR3Q06889 387 aa8.64□□□□□ -1.03
TM9SF3-204ENST00000475401 DDR2Q16832 855 aa8.64□□□□□ -1.03
TM9SF3-204ENST00000475401 GAB4Q2WGN9 574 aa8.64□□□□□ -1.03
TM9SF3-204ENST00000475401 EEPD1Q7L9B9 569 aa8.64□□□□□ -1.03
TM9SF3-204ENST00000475401 PPP1R14AQ96A00 147 aa8.64□□□□□ -1.03
TM9SF3-204ENST00000475401 TCTN2Q96GX1 697 aa8.64□□□□□ -1.03
TM9SF3-204ENST00000475401 KLHL25Q9H0H3 589 aa8.64□□□□□ -1.03
TM9SF3-204ENST00000475401 GSNP06396 782 aa8.63□□□□□ -1.03
TM9SF3-204ENST00000475401 ENDOUP21128 410 aaKnown RBP8.63□□□□□ -1.03
TM9SF3-204ENST00000475401 ZNF445P59923 1031 aa8.63□□□□□ -1.03
TM9SF3-204ENST00000475401 RBL2Q08999 1139 aa8.63□□□□□ -1.03
TM9SF3-204ENST00000475401 SLC23A3Q6PIS1 610 aa8.63□□□□□ -1.03
TM9SF3-204ENST00000475401 RNF111Q6ZNA4 994 aa8.63□□□□□ -1.03
TM9SF3-204ENST00000475401 CRACR2BQ8N4Y2 399 aaPredicted RBP8.63□□□□□ -1.03
TM9SF3-204ENST00000475401 PMFBP1Q8TBY8 1022 aa8.63□□□□□ -1.03
TM9SF3-204ENST00000475401 BRF1Q92994 677 aa8.63□□□□□ -1.03
TM9SF3-204ENST00000475401 FGD4Q96M96 766 aa8.63□□□□□ -1.03
TM9SF3-204ENST00000475401 SIRPGQ9P1W8 387 aa8.63□□□□□ -1.03
TM9SF3-204ENST00000475401 DIS3Q9Y2L1 958 aaKnown RBP8.63□□□□□ -1.03
TM9SF3-204ENST00000475401 WASH4PA8MWX3 477 aa8.62□□□□□ -1.03
TM9SF3-204ENST00000475401 RBAK-RBAKDNI3L0D1 243 aa8.62□□□□□ -1.03
TM9SF3-204ENST00000475401 AGRPO00253 132 aa8.62□□□□□ -1.03
TM9SF3-204ENST00000475401 SHOXO15266 292 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms