RNA–Protein interactions for RNA: ENST00000475255.5

SEMA4D-217, Transcript of semaphorin 4D, humanhuman

TSL 1 (best)

Gene SEMA4D, Length 3,053 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-217ENST00000475255 ELOA2Q8IYF1 753 aaPredicted RBP15.45■□□□□ 0.06
SEMA4D-217ENST00000475255 AFAP1L1Q8TED9 768 aa15.45■□□□□ 0.06
SEMA4D-217ENST00000475255 GSDMAQ96QA5 445 aa15.45■□□□□ 0.06
SEMA4D-217ENST00000475255 SOS2Q07890 1332 aaPredicted RBP15.44■□□□□ 0.06
SEMA4D-217ENST00000475255 TMEM94Q12767 1356 aa15.44■□□□□ 0.06
SEMA4D-217ENST00000475255 NKRFO15226 690 aaKnown RBP eCLIP15.44■□□□□ 0.06
SEMA4D-217ENST00000475255 IQUBQ8NA54 791 aa15.44■□□□□ 0.06
SEMA4D-217ENST00000475255 RASGRP4Q8TDF6 673 aa15.44■□□□□ 0.06
SEMA4D-217ENST00000475255 CNNM2Q9H8M5 875 aa15.44■□□□□ 0.06
SEMA4D-217ENST00000475255 AGPAT5Q9NUQ2 364 aa15.44■□□□□ 0.06
SEMA4D-217ENST00000475255 MST1RQ04912 1400 aa15.44■□□□□ 0.06
SEMA4D-217ENST00000475255 DDX60Q8IY21 1712 aaKnown RBP15.44■□□□□ 0.06
SEMA4D-217ENST00000475255 A0A0G2JS52 829 aa15.44■□□□□ 0.06
SEMA4D-217ENST00000475255 USP14P54578 494 aa15.44■□□□□ 0.06
SEMA4D-217ENST00000475255 KIAA1328Q86T90 577 aa15.44■□□□□ 0.06
SEMA4D-217ENST00000475255 HPCAL4Q9UM19 191 aa15.44■□□□□ 0.06
SEMA4D-217ENST00000475255 CAMTA1Q9Y6Y1 1673 aa15.44■□□□□ 0.06
SEMA4D-217ENST00000475255 ABCC12Q96J65 1359 aa15.43■□□□□ 0.06
SEMA4D-217ENST00000475255 KCTD19Q17RG1 926 aaPredicted RBP15.43■□□□□ 0.06
SEMA4D-217ENST00000475255 TTC31Q49AM3 519 aaPredicted RBP15.43■□□□□ 0.06
SEMA4D-217ENST00000475255 CTR9Q6PD62 1173 aa15.43■□□□□ 0.06
SEMA4D-217ENST00000475255 RASSF8Q8NHQ8 419 aa15.43■□□□□ 0.06
SEMA4D-217ENST00000475255 HDAC7Q8WUI4 952 aa15.43■□□□□ 0.06
SEMA4D-217ENST00000475255 SMARCC1Q92922 1105 aaPredicted RBP15.43■□□□□ 0.06
SEMA4D-217ENST00000475255 PRDM11Q9NQV5 511 aa15.43■□□□□ 0.06
SEMA4D-217ENST00000475255 C1orf167Q5SNV9 1468 aa15.43■□□□□ 0.06
SEMA4D-217ENST00000475255 TRAPPC11Q7Z392 1133 aa15.43■□□□□ 0.06
SEMA4D-217ENST00000475255 IRF2BP1Q8IU81 584 aa15.43■□□□□ 0.06
SEMA4D-217ENST00000475255 ENAHQ8N8S7 591 aaPredicted RBP15.43■□□□□ 0.06
SEMA4D-217ENST00000475255 NACAP1Q9BZK3 213 aa15.43■□□□□ 0.06
SEMA4D-217ENST00000475255 GBP3Q9H0R5 595 aa15.43■□□□□ 0.06
SEMA4D-217ENST00000475255 JADE2Q9NQC1 790 aa15.43■□□□□ 0.06
SEMA4D-217ENST00000475255 EHD2Q9NZN4 543 aa15.43■□□□□ 0.06
SEMA4D-217ENST00000475255 SAR1BQ9Y6B6 198 aa15.43■□□□□ 0.06
SEMA4D-217ENST00000475255 LAMB4A4D0S4 1761 aa15.43■□□□□ 0.06
SEMA4D-217ENST00000475255 FER1L4A9Z1Z3 1794 aa15.43■□□□□ 0.06
SEMA4D-217ENST00000475255 PKD1L3Q7Z443 1732 aa15.43■□□□□ 0.06
SEMA4D-217ENST00000475255 CCDC196A0A1B0GTZ2 297 aa15.42■□□□□ 0.06
SEMA4D-217ENST00000475255 PARP1P09874 1014 aaKnown RBP15.42■□□□□ 0.06
SEMA4D-217ENST00000475255 ARID4AP29374 1257 aaPredicted RBP15.42■□□□□ 0.06
SEMA4D-217ENST00000475255 STIM1Q13586 685 aa15.42■□□□□ 0.06
SEMA4D-217ENST00000475255 KRT26Q7Z3Y9 468 aa15.42■□□□□ 0.06
SEMA4D-217ENST00000475255 PCMTD1Q96MG8 357 aaPredicted RBP15.42■□□□□ 0.06
SEMA4D-217ENST00000475255 LIMA1Q9UHB6 759 aaKnown RBP15.42■□□□□ 0.06
SEMA4D-217ENST00000475255 KIF1AQ12756 1690 aa15.42■□□□□ 0.06
SEMA4D-217ENST00000475255 CYP7A1P22680 504 aa15.42■□□□□ 0.06
SEMA4D-217ENST00000475255 IRX3P78415 501 aaPredicted RBP15.42■□□□□ 0.06
SEMA4D-217ENST00000475255 SLC7A5Q01650 507 aa15.42■□□□□ 0.06
SEMA4D-217ENST00000475255 ALX1Q15699 326 aa15.42■□□□□ 0.06
SEMA4D-217ENST00000475255 WDR59Q6PJI9 974 aa15.42■□□□□ 0.06
SEMA4D-217ENST00000475255 GPATCH11Q8N954 259 aa15.42■□□□□ 0.06
SEMA4D-217ENST00000475255 STAG1Q8WVM7 1258 aa15.42■□□□□ 0.06
SEMA4D-217ENST00000475255 JAKMIP2Q96AA8 810 aa15.42■□□□□ 0.06
SEMA4D-217ENST00000475255 RRP36Q96EU6 259 aaKnown RBP15.42■□□□□ 0.06
SEMA4D-217ENST00000475255 PHF20Q9BVI0 1012 aa15.42■□□□□ 0.06
SEMA4D-217ENST00000475255 B4DLN1 442 aa15.42■□□□□ 0.06
SEMA4D-217ENST00000475255 PRPF6O94906 941 aaKnown RBP15.42■□□□□ 0.06
SEMA4D-217ENST00000475255 CCT5P48643 541 aa15.42■□□□□ 0.06
SEMA4D-217ENST00000475255 PUM3Q15397 648 aaKnown RBP15.42■□□□□ 0.06
SEMA4D-217ENST00000475255 GIGYF2Q6Y7W6 1299 aaKnown RBP15.42■□□□□ 0.06
SEMA4D-217ENST00000475255 MICALL1Q8N3F8 863 aa15.42■□□□□ 0.06
SEMA4D-217ENST00000475255 TMOD3Q9NYL9 352 aa15.42■□□□□ 0.06
SEMA4D-217ENST00000475255 FBXO3Q9UK99 471 aa15.42■□□□□ 0.06
SEMA4D-217ENST00000475255 LUC7L2Q9Y383 392 aaKnown RBP15.42■□□□□ 0.06
SEMA4D-217ENST00000475255 PCDH11XQ9BZA7 1347 aa15.41■□□□□ 0.06
SEMA4D-217ENST00000475255 PCDH11YQ9BZA8 1340 aa15.41■□□□□ 0.06
SEMA4D-217ENST00000475255 ATF3P18847 181 aa15.41■□□□□ 0.06
SEMA4D-217ENST00000475255 CXCR5P32302 372 aa15.41■□□□□ 0.06
SEMA4D-217ENST00000475255 DYNLL1P63167 89 aaKnown RBP15.41■□□□□ 0.06
SEMA4D-217ENST00000475255 CCDC51Q96ER9 411 aa15.41■□□□□ 0.06
SEMA4D-217ENST00000475255 CRACR2AQ9BSW2 395 aa15.41■□□□□ 0.06
SEMA4D-217ENST00000475255 NUP188Q5SRE5 1749 aa15.41■□□□□ 0.06
SEMA4D-217ENST00000475255 RPN1P04843 607 aaKnown RBP15.41■□□□□ 0.06
SEMA4D-217ENST00000475255 UQCRFS1P1P0C7P4 283 aa15.41■□□□□ 0.06
SEMA4D-217ENST00000475255 MAGEA9P43362 315 aa15.41■□□□□ 0.06
SEMA4D-217ENST00000475255 LIG3P49916 1009 aa15.41■□□□□ 0.06
SEMA4D-217ENST00000475255 OR8K1Q8NGG5 319 aa15.41■□□□□ 0.06
SEMA4D-217ENST00000475255 LPIN2Q92539 896 aa15.41■□□□□ 0.06
SEMA4D-217ENST00000475255 SELENOOQ9BVL4 669 aa15.41■□□□□ 0.06
SEMA4D-217ENST00000475255 KAT14Q9H8E8 782 aa15.41■□□□□ 0.06
SEMA4D-217ENST00000475255 MAP3K15Q6ZN16 1313 aa15.4■□□□□ 0.06
SEMA4D-217ENST00000475255 PLEKP08567 350 aaPredicted RBP15.4■□□□□ 0.06
SEMA4D-217ENST00000475255 DNA2P51530 1060 aa15.4■□□□□ 0.06
SEMA4D-217ENST00000475255 NPY5RQ15761 445 aa15.4■□□□□ 0.06
SEMA4D-217ENST00000475255 FAM47AQ5JRC9 791 aa15.4■□□□□ 0.06
SEMA4D-217ENST00000475255 IFIT1BQ5T764 474 aaKnown RBP15.4■□□□□ 0.06
SEMA4D-217ENST00000475255 PDXDC2PQ6P474 469 aa15.4■□□□□ 0.06
SEMA4D-217ENST00000475255 ANKRD20A12PQ8NF67 263 aa15.4■□□□□ 0.06
SEMA4D-217ENST00000475255 ATRNO75882 1429 aa15.4■□□□□ 0.06
SEMA4D-217ENST00000475255 ZC3H4Q9UPT8 1303 aaKnown RBP15.4■□□□□ 0.06
SEMA4D-217ENST00000475255 AGPSO00116 658 aa15.4■□□□□ 0.06
SEMA4D-217ENST00000475255 XBP1P17861 261 aa15.4■□□□□ 0.06
SEMA4D-217ENST00000475255 EIF5P55010 431 aaKnown RBP15.4■□□□□ 0.06
SEMA4D-217ENST00000475255 NLRP5P59047 1200 aa15.4■□□□□ 0.06
SEMA4D-217ENST00000475255 SEC23AQ15436 765 aa15.4■□□□□ 0.06
SEMA4D-217ENST00000475255 PLA2G12BQ9BX93 195 aa15.4■□□□□ 0.06
SEMA4D-217ENST00000475255 RNF26Q9BY78 433 aaPredicted RBP15.4■□□□□ 0.06
SEMA4D-217ENST00000475255 ACBD3Q9H3P7 528 aa15.4■□□□□ 0.06
SEMA4D-217ENST00000475255 MED4Q9NPJ6 270 aa15.4■□□□□ 0.06
SEMA4D-217ENST00000475255 RWDD2AQ9UIY3 292 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms