RNA–Protein interactions for RNA: ENST00000475049.5

SDHB-204, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 3

Gene SDHB, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-204ENST00000475049 NBPF9Q3BBW0 867 aa6.14□□□□□ -1.43
SDHB-204ENST00000475049 FAM214BQ7L5A3 538 aa6.14□□□□□ -1.43
SDHB-204ENST00000475049 DTWD2Q8NBA8 298 aa6.14□□□□□ -1.43
SDHB-204ENST00000475049 VWCEQ96DN2 955 aa6.14□□□□□ -1.43
SDHB-204ENST00000475049 PFDN2Q9UHV9 154 aa6.14□□□□□ -1.43
SDHB-204ENST00000475049 ZNF451Q9Y4E5 1061 aa6.14□□□□□ -1.43
SDHB-204ENST00000475049 COL17A1Q9UMD9 1497 aaPredicted RBP6.14□□□□□ -1.43
SDHB-204ENST00000475049 AGRPO00253 132 aa6.13□□□□□ -1.43
SDHB-204ENST00000475049 CD247P20963 164 aa6.13□□□□□ -1.43
SDHB-204ENST00000475049 TNK2Q07912 1038 aa6.13□□□□□ -1.43
SDHB-204ENST00000475049 CPSF6Q16630 551 aaKnown RBP eCLIP6.13□□□□□ -1.43
SDHB-204ENST00000475049 CDKAL1Q5VV42 579 aa6.13□□□□□ -1.43
SDHB-204ENST00000475049 ADCY4Q8NFM4 1077 aa6.13□□□□□ -1.43
SDHB-204ENST00000475049 BRF1Q92994 677 aa6.13□□□□□ -1.43
SDHB-204ENST00000475049 Q96M66 194 aa6.13□□□□□ -1.43
SDHB-204ENST00000475049 DNAJC7Q99615 494 aa6.13□□□□□ -1.43
SDHB-204ENST00000475049 DSCC1Q9BVC3 393 aa6.13□□□□□ -1.43
SDHB-204ENST00000475049 PRDM14Q9GZV8 571 aa6.13□□□□□ -1.43
SDHB-204ENST00000475049 GFOD1Q9NXC2 390 aa6.13□□□□□ -1.43
SDHB-204ENST00000475049 PIM2Q9P1W9 311 aa6.13□□□□□ -1.43
SDHB-204ENST00000475049 CAPN6Q9Y6Q1 641 aa6.13□□□□□ -1.43
SDHB-204ENST00000475049 SHROOM4Q9ULL8 1493 aa6.13□□□□□ -1.43
SDHB-204ENST00000475049 LOC105371045A0A1W2PR82 267 aa6.12□□□□□ -1.43
SDHB-204ENST00000475049 MEIS1O00470 390 aa6.12□□□□□ -1.43
SDHB-204ENST00000475049 CBFA2T2O43439 604 aa6.12□□□□□ -1.43
SDHB-204ENST00000475049 ZNF865P0CJ78 1059 aaPredicted RBP6.12□□□□□ -1.43
SDHB-204ENST00000475049 ZNF143P52747 638 aaPredicted RBP6.12□□□□□ -1.43
SDHB-204ENST00000475049 OXCT1P55809 520 aa6.12□□□□□ -1.43
SDHB-204ENST00000475049 SSRP1Q08945 709 aaKnown RBP6.12□□□□□ -1.43
SDHB-204ENST00000475049 NMIQ13287 307 aaPredicted RBP6.12□□□□□ -1.43
SDHB-204ENST00000475049 SNW1Q13573 536 aaKnown RBP6.12□□□□□ -1.43
SDHB-204ENST00000475049 ANKRD39Q53RE8 183 aa6.12□□□□□ -1.43
SDHB-204ENST00000475049 GIMAP6Q6P9H5 292 aa6.12□□□□□ -1.43
SDHB-204ENST00000475049 TMC3Q7Z5M5 1100 aa6.12□□□□□ -1.43
SDHB-204ENST00000475049 ZDHHC13Q8IUH4 622 aa6.12□□□□□ -1.43
SDHB-204ENST00000475049 ST13P5Q8NFI4 369 aaPredicted RBP6.12□□□□□ -1.43
SDHB-204ENST00000475049 PIWIL2Q8TC59 973 aaKnown RBP6.12□□□□□ -1.43
SDHB-204ENST00000475049 KRTAP9-2Q9BYQ4 174 aa6.12□□□□□ -1.43
SDHB-204ENST00000475049 KLHL25Q9H0H3 589 aa6.12□□□□□ -1.43
SDHB-204ENST00000475049 EPN3Q9H201 632 aa6.12□□□□□ -1.43
SDHB-204ENST00000475049 GP6Q9HCN6 339 aa6.12□□□□□ -1.43
SDHB-204ENST00000475049 WHRNQ9P202 907 aa6.12□□□□□ -1.43
SDHB-204ENST00000475049 TMA7Q9Y2S6 64 aaKnown RBP6.12□□□□□ -1.43
SDHB-204ENST00000475049 KDM2BQ8NHM5 1336 aa6.11□□□□□ -1.43
SDHB-204ENST00000475049 IQCA1LA6NCM1 817 aa6.11□□□□□ -1.43
SDHB-204ENST00000475049 NOP56O00567 594 aaKnown RBP6.11□□□□□ -1.43
SDHB-204ENST00000475049 SMARCA5O60264 1052 aaPredicted RBP6.11□□□□□ -1.43
SDHB-204ENST00000475049 CEACAM5P06731 702 aa6.11□□□□□ -1.43
SDHB-204ENST00000475049 CD97P48960 835 aa6.11□□□□□ -1.43
SDHB-204ENST00000475049 PPP2R5DQ14738 602 aa6.11□□□□□ -1.43
SDHB-204ENST00000475049 SLC10A6Q3KNW5 377 aa6.11□□□□□ -1.43
SDHB-204ENST00000475049 C22orf34Q6ZV56 151 aa6.11□□□□□ -1.43
SDHB-204ENST00000475049 SPATC1Q76KD6 591 aa6.11□□□□□ -1.43
SDHB-204ENST00000475049 LRRN4CLQ8ND94 238 aa6.11□□□□□ -1.43
SDHB-204ENST00000475049 NOL6Q9H6R4 1146 aaKnown RBP6.11□□□□□ -1.43
SDHB-204ENST00000475049 GPATCH2Q9NW75 528 aa6.11□□□□□ -1.43
SDHB-204ENST00000475049 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.1□□□□□ -1.43
SDHB-204ENST00000475049 H3BS24 57 aa6.1□□□□□ -1.43
SDHB-204ENST00000475049 SHOXO15266 292 aa6.1□□□□□ -1.43
SDHB-204ENST00000475049 MED26O95402 600 aa6.1□□□□□ -1.43
SDHB-204ENST00000475049 PRAMEF1O95521 474 aa6.1□□□□□ -1.43
SDHB-204ENST00000475049 TGFB1P01137 390 aa6.1□□□□□ -1.43
SDHB-204ENST00000475049 SSTR4P31391 388 aa6.1□□□□□ -1.43
SDHB-204ENST00000475049 ZNF445P59923 1031 aa6.1□□□□□ -1.43
SDHB-204ENST00000475049 PLD6Q8N2A8 252 aaKnown RBP6.1□□□□□ -1.43
SDHB-204ENST00000475049 FIBCD1Q8N539 461 aa6.1□□□□□ -1.43
SDHB-204ENST00000475049 NETO1Q8TDF5 533 aa6.1□□□□□ -1.43
SDHB-204ENST00000475049 ZDHHC15Q96MV8 337 aa6.1□□□□□ -1.43
SDHB-204ENST00000475049 TRIT1Q9H3H1 467 aaKnown RBP6.1□□□□□ -1.43
SDHB-204ENST00000475049 MKNK2Q9HBH9 465 aa6.1□□□□□ -1.43
SDHB-204ENST00000475049 CHST7Q9NS84 486 aa6.1□□□□□ -1.43
SDHB-204ENST00000475049 ZSWIM5Q9P217 1185 aa6.1□□□□□ -1.43
SDHB-204ENST00000475049 APEX2Q9UBZ4 518 aa6.1□□□□□ -1.43
SDHB-204ENST00000475049 SUSD2Q9UGT4 822 aa6.1□□□□□ -1.43
SDHB-204ENST00000475049 ZMYM5Q9UJ78 669 aa6.1□□□□□ -1.43
SDHB-204ENST00000475049 AKT3Q9Y243 479 aa6.1□□□□□ -1.43
SDHB-204ENST00000475049 U3KQE9 123 aa6.1□□□□□ -1.43
SDHB-204ENST00000475049 SIGLEC6O43699 453 aa6.09□□□□□ -1.43
SDHB-204ENST00000475049 DIAPH1O60610 1272 aaKnown RBP6.09□□□□□ -1.43
SDHB-204ENST00000475049 FOSL1P15407 271 aa6.09□□□□□ -1.43
SDHB-204ENST00000475049 IFI16Q16666 785 aaKnown RBP6.09□□□□□ -1.43
SDHB-204ENST00000475049 NKPD1Q17RQ9 610 aa6.09□□□□□ -1.43
SDHB-204ENST00000475049 CWF19L1Q69YN2 538 aaKnown RBP6.09□□□□□ -1.43
SDHB-204ENST00000475049 LRRC47Q8N1G4 583 aaKnown RBP6.09□□□□□ -1.43
SDHB-204ENST00000475049 BVESQ8NE79 360 aa6.09□□□□□ -1.43
SDHB-204ENST00000475049 HSPA12BQ96MM6 686 aa6.09□□□□□ -1.43
SDHB-204ENST00000475049 PCMTD2Q9NV79 361 aa6.09□□□□□ -1.43
SDHB-204ENST00000475049 ZC3H7BQ9UGR2 993 aaKnown RBP6.09□□□□□ -1.43
SDHB-204ENST00000475049 SF3B6Q9Y3B4 125 aaKnown RBP6.09□□□□□ -1.43
SDHB-204ENST00000475049 FHOD1Q9Y613 1164 aa6.09□□□□□ -1.43
SDHB-204ENST00000475049 MRPL42Q9Y6G3 142 aaKnown RBP6.09□□□□□ -1.43
SDHB-204ENST00000475049 TMEM265A0A087WTH1 108 aa6.08□□□□□ -1.44
SDHB-204ENST00000475049 SSU72P8A0A1W2PR75 194 aa6.08□□□□□ -1.44
SDHB-204ENST00000475049 TLDC2A0PJX2 215 aa6.08□□□□□ -1.44
SDHB-204ENST00000475049 SHISA3A0PJX4 238 aa6.08□□□□□ -1.44
SDHB-204ENST00000475049 PRR19A6NJB7 356 aa6.08□□□□□ -1.44
SDHB-204ENST00000475049 KCNH1O95259 989 aa6.08□□□□□ -1.44
SDHB-204ENST00000475049 GRIK1P39086 918 aa6.08□□□□□ -1.44
SDHB-204ENST00000475049 CLCN7P51798 805 aa6.08□□□□□ -1.44
SDHB-204ENST00000475049 POMZP3Q6PJE2 187 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms