RNA–Protein interactions for RNA: ENST00000474742.1

HDAC9-222, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-222ENST00000474742 BCL2L13Q9BXK5 485 aa1.79□□□□□ -2.12
HDAC9-222ENST00000474742 WNT10AQ9GZT5 417 aa1.79□□□□□ -2.12
HDAC9-222ENST00000474742 USP40Q9NVE5 1235 aa1.79□□□□□ -2.12
HDAC9-222ENST00000474742 KIAA1522Q9P206 1035 aaPredicted RBP1.79□□□□□ -2.12
HDAC9-222ENST00000474742 CYP8B1Q9UNU6 501 aa1.79□□□□□ -2.12
HDAC9-222ENST00000474742 TTF2Q9UNY4 1162 aaKnown RBP1.79□□□□□ -2.12
HDAC9-222ENST00000474742 PCDHA11Q9Y5I1 949 aa1.79□□□□□ -2.12
HDAC9-222ENST00000474742 SNCAIPQ9Y6H5 919 aa1.79□□□□□ -2.12
HDAC9-222ENST00000474742 RBM47A0AV96 593 aaKnown RBP1.78□□□□□ -2.12
HDAC9-222ENST00000474742 ABLIM1O14639 778 aa1.78□□□□□ -2.12
HDAC9-222ENST00000474742 N4BP3O15049 544 aa1.78□□□□□ -2.12
HDAC9-222ENST00000474742 SORBS3O60504 671 aa1.78□□□□□ -2.12
HDAC9-222ENST00000474742 DNAJA2O60884 412 aa1.78□□□□□ -2.12
HDAC9-222ENST00000474742 PF4P02776 101 aa1.78□□□□□ -2.12
HDAC9-222ENST00000474742 MPOP05164 745 aa1.78□□□□□ -2.12
HDAC9-222ENST00000474742 PGRP06401 933 aa1.78□□□□□ -2.12
HDAC9-222ENST00000474742 ERCC3P19447 782 aa1.78□□□□□ -2.12
HDAC9-222ENST00000474742 CAP2P40123 477 aa1.78□□□□□ -2.12
HDAC9-222ENST00000474742 ARL4AP40617 200 aa1.78□□□□□ -2.12
HDAC9-222ENST00000474742 KCNC1P48547 511 aa1.78□□□□□ -2.12
HDAC9-222ENST00000474742 EPHB3P54753 998 aa1.78□□□□□ -2.12
HDAC9-222ENST00000474742 RPS26P62854 115 aaKnown RBP1.78□□□□□ -2.12
HDAC9-222ENST00000474742 ZXDAP98168 799 aa1.78□□□□□ -2.12
HDAC9-222ENST00000474742 NFKB2Q00653 900 aa1.78□□□□□ -2.12
HDAC9-222ENST00000474742 XPCQ01831 940 aaPredicted RBP1.78□□□□□ -2.12
HDAC9-222ENST00000474742 PDE4BQ07343 736 aa1.78□□□□□ -2.12
HDAC9-222ENST00000474742 CAMK2GQ13555 558 aaPredicted RBP1.78□□□□□ -2.12
HDAC9-222ENST00000474742 NR0B2Q15466 257 aa1.78□□□□□ -2.12
HDAC9-222ENST00000474742 SCARA3Q6AZY7 606 aa1.78□□□□□ -2.12
HDAC9-222ENST00000474742 ERMP1Q7Z2K6 904 aa1.78□□□□□ -2.12
HDAC9-222ENST00000474742 TSPYL5Q86VY4 417 aaPredicted RBP1.78□□□□□ -2.12
HDAC9-222ENST00000474742 NLGN1Q8N2Q7 840 aa1.78□□□□□ -2.12
HDAC9-222ENST00000474742 FBXO27Q8NI29 283 aa1.78□□□□□ -2.12
HDAC9-222ENST00000474742 DACT3Q96B18 629 aaPredicted RBP1.78□□□□□ -2.12
HDAC9-222ENST00000474742 ZNF428Q96B54 188 aa1.78□□□□□ -2.12
HDAC9-222ENST00000474742 CRELD1Q96HD1 420 aa1.78□□□□□ -2.12
HDAC9-222ENST00000474742 DPH2Q9BQC3 489 aaPredicted RBP1.78□□□□□ -2.12
HDAC9-222ENST00000474742 NOC4LQ9BVI4 516 aaKnown RBP1.78□□□□□ -2.12
HDAC9-222ENST00000474742 GCM1Q9NP62 436 aa1.78□□□□□ -2.12
HDAC9-222ENST00000474742 LUC7LQ9NQ29 371 aaKnown RBP1.78□□□□□ -2.12
HDAC9-222ENST00000474742 KBTBD4Q9NVX7 518 aa1.78□□□□□ -2.12
HDAC9-222ENST00000474742 MBD1Q9UIS9 605 aaPredicted RBP1.78□□□□□ -2.12
HDAC9-222ENST00000474742 MYRFQ9Y2G1 1151 aa1.78□□□□□ -2.12
HDAC9-222ENST00000474742 POLR3KQ9Y2Y1 108 aaPredicted RBP1.78□□□□□ -2.12
HDAC9-222ENST00000474742 CORINQ9Y5Q5 1042 aa1.78□□□□□ -2.12
HDAC9-222ENST00000474742 A0A1W2PQ27 194 aa1.77□□□□□ -2.13
HDAC9-222ENST00000474742 A0A1W2PQ64 194 aa1.77□□□□□ -2.13
HDAC9-222ENST00000474742 A0A1W2PQC6 194 aa1.77□□□□□ -2.13
HDAC9-222ENST00000474742 A0A1W2PQD8 194 aa1.77□□□□□ -2.13
HDAC9-222ENST00000474742 ZBTB7CA1YPR0 619 aa1.77□□□□□ -2.13
HDAC9-222ENST00000474742 MINDY4BA8MYZ0 360 aa1.77□□□□□ -2.13
HDAC9-222ENST00000474742 UPK3BL1B0FP48 263 aa1.77□□□□□ -2.13
HDAC9-222ENST00000474742 UPK3BL2E5RIL1 263 aa1.77□□□□□ -2.13
HDAC9-222ENST00000474742 AKAP8O43823 692 aaKnown RBP1.77□□□□□ -2.13
HDAC9-222ENST00000474742 GREM1O60565 184 aa1.77□□□□□ -2.13
HDAC9-222ENST00000474742 CILPO75339 1184 aa1.77□□□□□ -2.13
HDAC9-222ENST00000474742 RECKO95980 971 aa1.77□□□□□ -2.13
HDAC9-222ENST00000474742 F13A1P00488 732 aa1.77□□□□□ -2.13
HDAC9-222ENST00000474742 SDHBP21912 280 aa1.77□□□□□ -2.13
HDAC9-222ENST00000474742 VIPR1P32241 457 aa1.77□□□□□ -2.13
HDAC9-222ENST00000474742 CRKP46108 304 aa1.77□□□□□ -2.13
HDAC9-222ENST00000474742 HMGA2P52926 109 aa1.77□□□□□ -2.13
HDAC9-222ENST00000474742 RACK1P63244 317 aaKnown RBP1.77□□□□□ -2.13
HDAC9-222ENST00000474742 FAM160A1Q05DH4 1040 aa1.77□□□□□ -2.13
HDAC9-222ENST00000474742 TMEM62Q0P6H9 643 aa1.77□□□□□ -2.13
HDAC9-222ENST00000474742 RTP5Q14D33 572 aa1.77□□□□□ -2.13
HDAC9-222ENST00000474742 RAB3GAP1Q15042 981 aa1.77□□□□□ -2.13
HDAC9-222ENST00000474742 SLC6A19Q695T7 634 aa1.77□□□□□ -2.13
HDAC9-222ENST00000474742 FBXL19Q6PCT2 694 aa1.77□□□□□ -2.13
HDAC9-222ENST00000474742 HHIPL2Q6UWX4 724 aa1.77□□□□□ -2.13
HDAC9-222ENST00000474742 CEP128Q6ZU80 1094 aa1.77□□□□□ -2.13
HDAC9-222ENST00000474742 TMC6Q7Z403 805 aa1.77□□□□□ -2.13
HDAC9-222ENST00000474742 WAPLQ7Z5K2 1190 aa1.77□□□□□ -2.13
HDAC9-222ENST00000474742 LINC01356Q8N9X3 169 aa1.77□□□□□ -2.13
HDAC9-222ENST00000474742 MZB1Q8WU39 189 aa1.77□□□□□ -2.13
HDAC9-222ENST00000474742 JARID2Q92833 1246 aaPredicted RBP1.77□□□□□ -2.13
HDAC9-222ENST00000474742 ACSF2Q96CM8 615 aaPredicted RBP1.77□□□□□ -2.13
HDAC9-222ENST00000474742 TMEM87BQ96K49 555 aa1.77□□□□□ -2.13
HDAC9-222ENST00000474742 TMEM74Q96NL1 305 aa1.77□□□□□ -2.13
HDAC9-222ENST00000474742 RSRP1Q9BUV0 290 aa1.77□□□□□ -2.13
HDAC9-222ENST00000474742 BACH2Q9BYV9 841 aa1.77□□□□□ -2.13
HDAC9-222ENST00000474742 DUSP15Q9H1R2 295 aaPredicted RBP1.77□□□□□ -2.13
HDAC9-222ENST00000474742 KCNQ5Q9NR82 932 aa1.77□□□□□ -2.13
HDAC9-222ENST00000474742 TJP2Q9UDY2 1190 aa1.77□□□□□ -2.13
HDAC9-222ENST00000474742 VTI1BQ9UEU0 232 aa1.77□□□□□ -2.13
HDAC9-222ENST00000474742 ADAMTS1Q9UHI8 967 aa1.77□□□□□ -2.13
HDAC9-222ENST00000474742 PRR36Q9H6K5 1346 aa1.76□□□□□ -2.13
HDAC9-222ENST00000474742 A0A1W2PQJ5 194 aa1.76□□□□□ -2.13
HDAC9-222ENST00000474742 NUDT19A8MXV4 375 aa1.76□□□□□ -2.13
HDAC9-222ENST00000474742 OVOL3O00110 214 aa1.76□□□□□ -2.13
HDAC9-222ENST00000474742 HRKO00198 91 aa1.76□□□□□ -2.13
HDAC9-222ENST00000474742 FKTNO75072 461 aa1.76□□□□□ -2.13
HDAC9-222ENST00000474742 USP2O75604 605 aaPredicted RBP1.76□□□□□ -2.13
HDAC9-222ENST00000474742 PFKLP17858 780 aa1.76□□□□□ -2.13
HDAC9-222ENST00000474742 GBP2P32456 591 aaPredicted RBP1.76□□□□□ -2.13
HDAC9-222ENST00000474742 GDF5P43026 501 aa1.76□□□□□ -2.13
HDAC9-222ENST00000474742 YARSP54577 528 aaKnown RBP1.76□□□□□ -2.13
HDAC9-222ENST00000474742 NCKAP1LP55160 1127 aa1.76□□□□□ -2.13
HDAC9-222ENST00000474742 KRTAP10-2P60368 255 aa1.76□□□□□ -2.13
HDAC9-222ENST00000474742 FANCCQ00597 558 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms