RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 F5H6K3 240 aa9.7□□□□□ -0.86
CNN3-205ENST00000474409 GOLGA8HP0CJ92 632 aa9.7□□□□□ -0.86
CNN3-205ENST00000474409 BMP3P12645 472 aa9.7□□□□□ -0.86
CNN3-205ENST00000474409 HMGCS2P54868 508 aa9.7□□□□□ -0.86
CNN3-205ENST00000474409 BACE1P56817 501 aa9.7□□□□□ -0.86
CNN3-205ENST00000474409 KLRC3Q07444 240 aa9.7□□□□□ -0.86
CNN3-205ENST00000474409 ST3GAL1Q11201 340 aa9.7□□□□□ -0.86
CNN3-205ENST00000474409 IKQ13123 557 aaPredicted RBP9.7□□□□□ -0.86
CNN3-205ENST00000474409 PPP2R5BQ15173 497 aa9.7□□□□□ -0.86
CNN3-205ENST00000474409 LDLRAD1Q5T700 205 aa9.7□□□□□ -0.86
CNN3-205ENST00000474409 CST9Q5W186 159 aa9.7□□□□□ -0.86
CNN3-205ENST00000474409 USP17L2Q6R6M4 530 aa9.7□□□□□ -0.86
CNN3-205ENST00000474409 SIAH1Q8IUQ4 282 aa9.7□□□□□ -0.86
CNN3-205ENST00000474409 FANCBQ8NB91 859 aa9.7□□□□□ -0.86
CNN3-205ENST00000474409 SPRYD3Q8NCJ5 442 aa9.7□□□□□ -0.86
CNN3-205ENST00000474409 CNKSR2Q8WXI2 1034 aa9.7□□□□□ -0.86
CNN3-205ENST00000474409 LPAR1Q92633 364 aa9.7□□□□□ -0.86
CNN3-205ENST00000474409 SLC10A4Q96EP9 437 aa9.7□□□□□ -0.86
CNN3-205ENST00000474409 GMCL1Q96IK5 515 aa9.7□□□□□ -0.86
CNN3-205ENST00000474409 WNK4Q96J92 1243 aa9.7□□□□□ -0.86
CNN3-205ENST00000474409 MAP3K14Q99558 947 aa9.7□□□□□ -0.86
CNN3-205ENST00000474409 KIAA1683Q9H0B3 1180 aa9.7□□□□□ -0.86
CNN3-205ENST00000474409 FOXD4L1Q9NU39 408 aa9.7□□□□□ -0.86
CNN3-205ENST00000474409 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.7□□□□□ -0.86
CNN3-205ENST00000474409 CNTNAP5Q8WYK1 1306 aa9.7□□□□□ -0.86
CNN3-205ENST00000474409 PTPDC1A2A3K4 754 aa9.69□□□□□ -0.86
CNN3-205ENST00000474409 TMEM88BA6NKF7 163 aa9.69□□□□□ -0.86
CNN3-205ENST00000474409 WDR46O15213 610 aaKnown RBP9.69□□□□□ -0.86
CNN3-205ENST00000474409 SNHG28P0DPA3 235 aa9.69□□□□□ -0.86
CNN3-205ENST00000474409 CDC27P30260 824 aa9.69□□□□□ -0.86
CNN3-205ENST00000474409 GNAQP50148 359 aa9.69□□□□□ -0.86
CNN3-205ENST00000474409 ZNF543Q08ER8 600 aa9.69□□□□□ -0.86
CNN3-205ENST00000474409 MKRN3Q13064 507 aaKnown RBP9.69□□□□□ -0.86
CNN3-205ENST00000474409 DGKZQ13574 1117 aa9.69□□□□□ -0.86
CNN3-205ENST00000474409 CUL4AQ13619 759 aa9.69□□□□□ -0.86
CNN3-205ENST00000474409 WDR81Q562E7 1941 aa9.69□□□□□ -0.86
CNN3-205ENST00000474409 FAM83BQ5T0W9 1011 aa9.69□□□□□ -0.86
CNN3-205ENST00000474409 GPATCH4Q5T3I0 446 aaKnown RBP9.69□□□□□ -0.86
CNN3-205ENST00000474409 GADL1Q6ZQY3 521 aa9.69□□□□□ -0.86
CNN3-205ENST00000474409 PAXIP1Q6ZW49 1069 aaPredicted RBP9.69□□□□□ -0.86
CNN3-205ENST00000474409 TMTC3Q6ZXV5 915 aa9.69□□□□□ -0.86
CNN3-205ENST00000474409 KCTD1Q719H9 257 aa9.69□□□□□ -0.86
CNN3-205ENST00000474409 TRIM22Q8IYM9 498 aa9.69□□□□□ -0.86
CNN3-205ENST00000474409 IPO9Q96P70 1041 aaKnown RBP9.69□□□□□ -0.86
CNN3-205ENST00000474409 NUP88Q99567 741 aaPredicted RBP9.69□□□□□ -0.86
CNN3-205ENST00000474409 TANGO6Q9C0B7 1094 aa9.69□□□□□ -0.86
CNN3-205ENST00000474409 GPCPD1Q9NPB8 672 aa9.69□□□□□ -0.86
CNN3-205ENST00000474409 MAD2L2Q9UI95 211 aa9.69□□□□□ -0.86
CNN3-205ENST00000474409 SMC3Q9UQE7 1217 aa9.69□□□□□ -0.86
CNN3-205ENST00000474409 AFG3L2Q9Y4W6 797 aa9.69□□□□□ -0.86
CNN3-205ENST00000474409 STK36Q9NRP7 1315 aa9.68□□□□□ -0.86
CNN3-205ENST00000474409 PALM3A6NDB9 673 aaPredicted RBP9.68□□□□□ -0.86
CNN3-205ENST00000474409 KLRF2D3W0D1 207 aa9.68□□□□□ -0.86
CNN3-205ENST00000474409 IRF6O14896 467 aa9.68□□□□□ -0.86
CNN3-205ENST00000474409 PLEKHA8P1O95397 391 aa9.68□□□□□ -0.86
CNN3-205ENST00000474409 VCAM1P19320 739 aa9.68□□□□□ -0.86
CNN3-205ENST00000474409 ADD1P35611 737 aaKnown RBP9.68□□□□□ -0.86
CNN3-205ENST00000474409 SLC4A3P48751 1232 aa9.68□□□□□ -0.86
CNN3-205ENST00000474409 ZNF157P51786 506 aaPredicted RBP9.68□□□□□ -0.86
CNN3-205ENST00000474409 STAT2P52630 851 aa9.68□□□□□ -0.86
CNN3-205ENST00000474409 HMGN5P82970 282 aaKnown RBP9.68□□□□□ -0.86
CNN3-205ENST00000474409 AKAP17AQ02040 695 aaKnown RBP9.68□□□□□ -0.86
CNN3-205ENST00000474409 SNAPC2Q13487 334 aa9.68□□□□□ -0.86
CNN3-205ENST00000474409 SAMD1Q6SPF0 538 aaPredicted RBP9.68□□□□□ -0.86
CNN3-205ENST00000474409 SAPCD2Q86UD0 394 aa9.68□□□□□ -0.86
CNN3-205ENST00000474409 RASAL3Q86YV0 1011 aa9.68□□□□□ -0.86
CNN3-205ENST00000474409 STAG2Q8N3U4 1231 aa9.68□□□□□ -0.86
CNN3-205ENST00000474409 CCDC82Q8N4S0 544 aa9.68□□□□□ -0.86
CNN3-205ENST00000474409 FAM184AQ8NB25 1140 aa9.68□□□□□ -0.86
CNN3-205ENST00000474409 NSUN7Q8NE18 718 aaKnown RBP9.68□□□□□ -0.86
CNN3-205ENST00000474409 INTS4Q96HW7 963 aaKnown RBP9.68□□□□□ -0.86
CNN3-205ENST00000474409 LZTS2Q9BRK4 669 aa9.68□□□□□ -0.86
CNN3-205ENST00000474409 LLPHQ9BRT6 129 aaKnown RBP9.68□□□□□ -0.86
CNN3-205ENST00000474409 SLC26A6Q9BXS9 759 aa9.68□□□□□ -0.86
CNN3-205ENST00000474409 KCNH4Q9UQ05 1017 aa9.68□□□□□ -0.86
CNN3-205ENST00000474409 KIF3AQ9Y496 699 aa9.68□□□□□ -0.86
CNN3-205ENST00000474409 TLL2Q9Y6L7 1015 aa9.68□□□□□ -0.86
CNN3-205ENST00000474409 ZSWIM8A7E2V4 1837 aa9.68□□□□□ -0.86
CNN3-205ENST00000474409 LRRC37A2A6NM11 1700 aa9.68□□□□□ -0.86
CNN3-205ENST00000474409 A0A0G2JLL6 359 aaPredicted RBP9.67□□□□□ -0.86
CNN3-205ENST00000474409 TMEM232C9JQI7 657 aa9.67□□□□□ -0.86
CNN3-205ENST00000474409 CXCL11O14625 94 aa9.67□□□□□ -0.86
CNN3-205ENST00000474409 JAK2O60674 1132 aa9.67□□□□□ -0.86
CNN3-205ENST00000474409 PPFIA3O75145 1194 aa9.67□□□□□ -0.86
CNN3-205ENST00000474409 FLOT1O75955 427 aa9.67□□□□□ -0.86
CNN3-205ENST00000474409 ZBTB48P10074 688 aaPredicted RBP9.67□□□□□ -0.86
CNN3-205ENST00000474409 IFNAR1P17181 557 aa9.67□□□□□ -0.86
CNN3-205ENST00000474409 SSRP1Q08945 709 aaKnown RBP9.67□□□□□ -0.86
CNN3-205ENST00000474409 KIAA1755Q5JYT7 1200 aa9.67□□□□□ -0.86
CNN3-205ENST00000474409 RGMBQ6NW40 437 aa9.67□□□□□ -0.86
CNN3-205ENST00000474409 PRRT2Q7Z6L0 340 aaPredicted RBP9.67□□□□□ -0.86
CNN3-205ENST00000474409 HOMER1Q86YM7 354 aa9.67□□□□□ -0.86
CNN3-205ENST00000474409 CMTR1Q8N1G2 835 aaKnown RBP9.67□□□□□ -0.86
CNN3-205ENST00000474409 PROCA1Q8NCQ7 364 aaPredicted RBP9.67□□□□□ -0.86
CNN3-205ENST00000474409 PHKBQ93100 1093 aa9.67□□□□□ -0.86
CNN3-205ENST00000474409 DDX11Q96FC9 970 aa9.67□□□□□ -0.86
CNN3-205ENST00000474409 C12orf42Q96LP6 360 aa9.67□□□□□ -0.86
CNN3-205ENST00000474409 RNF26Q9BY78 433 aaPredicted RBP9.67□□□□□ -0.86
CNN3-205ENST00000474409 CPVLQ9H3G5 476 aa9.67□□□□□ -0.86
CNN3-205ENST00000474409 RPAP3Q9H6T3 665 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms