RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 NOTOA8MTQ0 251 aa4.39□□□□□ -1.71
CCDC39-203ENST00000473854 MATN3O15232 486 aa4.39□□□□□ -1.71
CCDC39-203ENST00000473854 PRICKLE3O43900 615 aaPredicted RBP4.39□□□□□ -1.71
CCDC39-203ENST00000473854 PRKCSHP14314 528 aaPredicted RBP4.39□□□□□ -1.71
CCDC39-203ENST00000473854 PFKLP17858 780 aa4.39□□□□□ -1.71
CCDC39-203ENST00000473854 ENDOUP21128 410 aaKnown RBP4.39□□□□□ -1.71
CCDC39-203ENST00000473854 RPL10P27635 214 aaKnown RBP4.39□□□□□ -1.71
CCDC39-203ENST00000473854 HMGA2P52926 109 aa4.39□□□□□ -1.71
CCDC39-203ENST00000473854 ADAM17P78536 824 aa4.39□□□□□ -1.71
CCDC39-203ENST00000473854 GALNT18Q6P9A2 607 aa4.39□□□□□ -1.71
CCDC39-203ENST00000473854 TMC7Q7Z402 723 aa4.39□□□□□ -1.71
CCDC39-203ENST00000473854 TMC6Q7Z403 805 aa4.39□□□□□ -1.71
CCDC39-203ENST00000473854 WAPLQ7Z5K2 1190 aa4.39□□□□□ -1.71
CCDC39-203ENST00000473854 TP53I13Q8NBR0 393 aaPredicted RBP4.39□□□□□ -1.71
CCDC39-203ENST00000473854 WDR26Q9H7D7 661 aa4.39□□□□□ -1.71
CCDC39-203ENST00000473854 SMPD4Q9NXE4 827 aa4.39□□□□□ -1.71
CCDC39-203ENST00000473854 SPG7Q9UQ90 795 aa4.39□□□□□ -1.71
CCDC39-203ENST00000473854 SSU72P8A0A1W2PR75 194 aa4.38□□□□□ -1.71
CCDC39-203ENST00000473854 BUB1BO60566 1050 aaPredicted RBP4.38□□□□□ -1.71
CCDC39-203ENST00000473854 FSHBP01225 129 aa4.38□□□□□ -1.71
CCDC39-203ENST00000473854 GDF5P43026 501 aa4.38□□□□□ -1.71
CCDC39-203ENST00000473854 TNNI2P48788 182 aa4.38□□□□□ -1.71
CCDC39-203ENST00000473854 CDK8P49336 464 aa4.38□□□□□ -1.71
CCDC39-203ENST00000473854 PCBP3P57721 371 aaKnown RBP4.38□□□□□ -1.71
CCDC39-203ENST00000473854 CHMP4BP1P59074 171 aa4.38□□□□□ -1.71
CCDC39-203ENST00000473854 ALG1LQ6GMV1 187 aa4.38□□□□□ -1.71
CCDC39-203ENST00000473854 TTC9BQ8N6N2 239 aa4.38□□□□□ -1.71
CCDC39-203ENST00000473854 SYTL5Q8TDW5 730 aaPredicted RBP4.38□□□□□ -1.71
CCDC39-203ENST00000473854 VWCEQ96DN2 955 aa4.38□□□□□ -1.71
CCDC39-203ENST00000473854 PCDHA5Q9Y5H7 936 aa4.38□□□□□ -1.71
CCDC39-203ENST00000473854 TAF6LQ9Y6J9 622 aa4.38□□□□□ -1.71
CCDC39-203ENST00000473854 WTIPA6NIX2 430 aaPredicted RBP4.37□□□□□ -1.71
CCDC39-203ENST00000473854 TREHO43280 583 aa4.37□□□□□ -1.71
CCDC39-203ENST00000473854 RTP1P59025 263 aa4.37□□□□□ -1.71
CCDC39-203ENST00000473854 DSC3Q14574 896 aa4.37□□□□□ -1.71
CCDC39-203ENST00000473854 TARBP2Q15633 366 aaKnown RBP4.37□□□□□ -1.71
CCDC39-203ENST00000473854 CPZQ66K79 652 aa4.37□□□□□ -1.71
CCDC39-203ENST00000473854 FAM13CQ8NE31 585 aa4.37□□□□□ -1.71
CCDC39-203ENST00000473854 ACSF2Q96CM8 615 aaPredicted RBP4.37□□□□□ -1.71
CCDC39-203ENST00000473854 OSBPL7Q9BZF2 842 aa4.37□□□□□ -1.71
CCDC39-203ENST00000473854 MIR1-1HGQ9H1L0 117 aa4.37□□□□□ -1.71
CCDC39-203ENST00000473854 TNFRSF10DQ9UBN6 386 aa4.37□□□□□ -1.71
CCDC39-203ENST00000473854 DCTN4Q9UJW0 460 aa4.37□□□□□ -1.71
CCDC39-203ENST00000473854 TTF2Q9UNY4 1162 aaKnown RBP4.37□□□□□ -1.71
CCDC39-203ENST00000473854 FFAR3O14843 346 aa4.36□□□□□ -1.71
CCDC39-203ENST00000473854 ATP2B2Q01814 1243 aa4.36□□□□□ -1.71
CCDC39-203ENST00000473854 RPL6Q02878 288 aaKnown RBP4.36□□□□□ -1.71
CCDC39-203ENST00000473854 RAB3GAP1Q15042 981 aa4.36□□□□□ -1.71
CCDC39-203ENST00000473854 TSNAXIP1Q2TAA8 658 aa4.36□□□□□ -1.71
CCDC39-203ENST00000473854 DAGLBQ8NCG7 672 aa4.36□□□□□ -1.71
CCDC39-203ENST00000473854 EAF1Q96JC9 268 aaPredicted RBP4.36□□□□□ -1.71
CCDC39-203ENST00000473854 KREMEN1Q96MU8 473 aa4.36□□□□□ -1.71
CCDC39-203ENST00000473854 SLITRK6Q9H5Y7 841 aa4.36□□□□□ -1.71
CCDC39-203ENST00000473854 C12orf49Q9H741 205 aa4.36□□□□□ -1.71
CCDC39-203ENST00000473854 KLHL14Q9P2G3 628 aa4.36□□□□□ -1.71
CCDC39-203ENST00000473854 CYR61O00622 381 aa4.35□□□□□ -1.71
CCDC39-203ENST00000473854 ITGB3P05106 788 aa4.35□□□□□ -1.71
CCDC39-203ENST00000473854 USP17L7P0C7H9 530 aa4.35□□□□□ -1.71
CCDC39-203ENST00000473854 NMIQ13287 307 aaPredicted RBP4.35□□□□□ -1.71
CCDC39-203ENST00000473854 SEPT6Q14141 434 aa4.35□□□□□ -1.71
CCDC39-203ENST00000473854 CBX2Q14781 532 aaPredicted RBP4.35□□□□□ -1.71
CCDC39-203ENST00000473854 NR1I3Q14994 352 aa4.35□□□□□ -1.71
CCDC39-203ENST00000473854 NT5DC1Q5TFE4 455 aa4.35□□□□□ -1.71
CCDC39-203ENST00000473854 LIPIQ6XZB0 460 aa4.35□□□□□ -1.71
CCDC39-203ENST00000473854 USP51Q70EK9 711 aa4.35□□□□□ -1.71
CCDC39-203ENST00000473854 SLFN12Q8IYM2 578 aa4.35□□□□□ -1.71
CCDC39-203ENST00000473854 ZNF655Q8N720 491 aaPredicted RBP4.35□□□□□ -1.71
CCDC39-203ENST00000473854 HHIPL1Q96JK4 782 aa4.35□□□□□ -1.71
CCDC39-203ENST00000473854 FCRL2Q96LA5 508 aaPredicted RBP4.35□□□□□ -1.71
CCDC39-203ENST00000473854 FRMD6Q96NE9 622 aa4.35□□□□□ -1.71
CCDC39-203ENST00000473854 MENTQ9BUN1 341 aa4.35□□□□□ -1.71
CCDC39-203ENST00000473854 C1QTNF3Q9BXJ4 246 aa4.35□□□□□ -1.71
CCDC39-203ENST00000473854 TCFL5Q9UL49 500 aa4.35□□□□□ -1.71
CCDC39-203ENST00000473854 SHISA3A0PJX4 238 aa4.34□□□□□ -1.71
CCDC39-203ENST00000473854 PLCG1P19174 1290 aa4.34□□□□□ -1.71
CCDC39-203ENST00000473854 RNF4P78317 190 aa4.34□□□□□ -1.71
CCDC39-203ENST00000473854 TMEM201Q5SNT2 666 aa4.34□□□□□ -1.71
CCDC39-203ENST00000473854 LINC00116Q8NCU8 138 aa4.34□□□□□ -1.71
CCDC39-203ENST00000473854 CCDC74BQ96LY2 380 aa4.34□□□□□ -1.71
CCDC39-203ENST00000473854 SAMD11Q96NU1 681 aa4.34□□□□□ -1.71
CCDC39-203ENST00000473854 IRS2Q9Y4H2 1338 aa4.34□□□□□ -1.71
CCDC39-203ENST00000473854 LRRN2O75325 713 aa4.33□□□□□ -1.72
CCDC39-203ENST00000473854 EFEMP2O95967 443 aa4.33□□□□□ -1.72
CCDC39-203ENST00000473854 MSL3P1P0C860 447 aa4.33□□□□□ -1.72
CCDC39-203ENST00000473854 RLBP1P12271 317 aa4.33□□□□□ -1.72
CCDC39-203ENST00000473854 SDHBP21912 280 aa4.33□□□□□ -1.72
CCDC39-203ENST00000473854 IGFBP6P24592 240 aaPredicted RBP4.33□□□□□ -1.72
CCDC39-203ENST00000473854 MAPKAPK2P49137 400 aa4.33□□□□□ -1.72
CCDC39-203ENST00000473854 GJA9P57773 515 aa4.33□□□□□ -1.72
CCDC39-203ENST00000473854 CYP4F8P98187 520 aa4.33□□□□□ -1.72
CCDC39-203ENST00000473854 CCDC85BQ15834 202 aaPredicted RBP4.33□□□□□ -1.72
CCDC39-203ENST00000473854 ZC3H14Q6PJT7 736 aaKnown RBP4.33□□□□□ -1.72
CCDC39-203ENST00000473854 AGMOQ6ZNB7 445 aa4.33□□□□□ -1.72
CCDC39-203ENST00000473854 FERMT3Q86UX7 667 aa4.33□□□□□ -1.72
CCDC39-203ENST00000473854 TXNDC2Q86VQ3 553 aa4.33□□□□□ -1.72
CCDC39-203ENST00000473854 MRIQ9BWK5 157 aa4.33□□□□□ -1.72
CCDC39-203ENST00000473854 HDAC8Q9BY41 377 aa4.33□□□□□ -1.72
CCDC39-203ENST00000473854 FOXP3Q9BZS1 431 aa4.33□□□□□ -1.72
CCDC39-203ENST00000473854 TNFRSF12AQ9NP84 129 aa4.33□□□□□ -1.72
CCDC39-203ENST00000473854 SUSD2Q9UGT4 822 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms