RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 PPARAQ07869 468 aa6.88□□□□□ -1.31
HERC4-209ENST00000473533 SPA17Q15506 151 aa6.88□□□□□ -1.31
HERC4-209ENST00000473533 ZNF827Q17R98 1081 aa6.88□□□□□ -1.31
HERC4-209ENST00000473533 IFIT1BQ5T764 474 aaKnown RBP6.88□□□□□ -1.31
HERC4-209ENST00000473533 PAPD7Q5XG87 772 aaKnown RBP6.88□□□□□ -1.31
HERC4-209ENST00000473533 TRAPPC11Q7Z392 1133 aa6.88□□□□□ -1.31
HERC4-209ENST00000473533 NLRP10Q86W26 655 aa6.88□□□□□ -1.31
HERC4-209ENST00000473533 FAM89AQ96GI7 184 aa6.88□□□□□ -1.31
HERC4-209ENST00000473533 RUFY1Q96T51 708 aa6.88□□□□□ -1.31
HERC4-209ENST00000473533 RHOXF2Q9BQY4 288 aa6.88□□□□□ -1.31
HERC4-209ENST00000473533 SH3GLB2Q9NR46 395 aa6.88□□□□□ -1.31
HERC4-209ENST00000473533 TRMT112Q9UI30 125 aaKnown RBP6.88□□□□□ -1.31
HERC4-209ENST00000473533 TSKSQ9UJT2 592 aa6.88□□□□□ -1.31
HERC4-209ENST00000473533 FAN1Q9Y2M0 1017 aa6.88□□□□□ -1.31
HERC4-209ENST00000473533 MYO5AQ9Y4I1 1855 aaKnown RBP6.88□□□□□ -1.31
HERC4-209ENST00000473533 SPATA31A3Q5VYP0 1347 aa6.87□□□□□ -1.31
HERC4-209ENST00000473533 SRCAPQ6ZRS2 3230 aa6.87□□□□□ -1.31
HERC4-209ENST00000473533 LGALS16A8MUM7 142 aa6.87□□□□□ -1.31
HERC4-209ENST00000473533 GSG1L2A8MUP6 293 aa6.87□□□□□ -1.31
HERC4-209ENST00000473533 FGFR2P21802 821 aa6.87□□□□□ -1.31
HERC4-209ENST00000473533 GNAQP50148 359 aa6.87□□□□□ -1.31
HERC4-209ENST00000473533 PPFIA1Q13136 1202 aa6.87□□□□□ -1.31
HERC4-209ENST00000473533 HSP90AA4PQ58FG1 418 aa6.87□□□□□ -1.31
HERC4-209ENST00000473533 SPECC1Q5M775 1068 aa6.87□□□□□ -1.31
HERC4-209ENST00000473533 POTEDQ86YR6 584 aa6.87□□□□□ -1.31
HERC4-209ENST00000473533 FAM76AQ8TAV0 307 aa6.87□□□□□ -1.31
HERC4-209ENST00000473533 NELFBQ8WX92 580 aa6.87□□□□□ -1.31
HERC4-209ENST00000473533 ALS2CR12Q96Q35 445 aa6.87□□□□□ -1.31
HERC4-209ENST00000473533 DNAJC7Q99615 494 aa6.87□□□□□ -1.31
HERC4-209ENST00000473533 MYL10Q9BUA6 226 aa6.87□□□□□ -1.31
HERC4-209ENST00000473533 ZSWIM4Q9H7M6 989 aa6.87□□□□□ -1.31
HERC4-209ENST00000473533 CAPN11Q9UMQ6 739 aa6.87□□□□□ -1.31
HERC4-209ENST00000473533 TACC1O75410 805 aa6.87□□□□□ -1.31
HERC4-209ENST00000473533 ATP2B1P20020 1258 aa6.87□□□□□ -1.31
HERC4-209ENST00000473533 IGHMBP2P38935 993 aaKnown RBP6.87□□□□□ -1.31
HERC4-209ENST00000473533 STX17P56962 302 aa6.87□□□□□ -1.31
HERC4-209ENST00000473533 VSNL1P62760 191 aa6.87□□□□□ -1.31
HERC4-209ENST00000473533 SETQ01105 290 aaPredicted RBP6.87□□□□□ -1.31
HERC4-209ENST00000473533 AMPD2Q01433 879 aa6.87□□□□□ -1.31
HERC4-209ENST00000473533 CTDSPL2Q05D32 466 aa6.87□□□□□ -1.31
HERC4-209ENST00000473533 FIGNQ5HY92 759 aa6.87□□□□□ -1.31
HERC4-209ENST00000473533 CCDC122Q5T0U0 273 aa6.87□□□□□ -1.31
HERC4-209ENST00000473533 FKBP15Q5T1M5 1219 aa6.87□□□□□ -1.31
HERC4-209ENST00000473533 ARHGAP27Q6ZUM4 889 aa6.87□□□□□ -1.31
HERC4-209ENST00000473533 C10orf67Q8IYJ2 551 aa6.87□□□□□ -1.31
HERC4-209ENST00000473533 TRIM58Q8NG06 486 aa6.87□□□□□ -1.31
HERC4-209ENST00000473533 DHTKD1Q96HY7 919 aaPredicted RBP6.87□□□□□ -1.31
HERC4-209ENST00000473533 DEF6Q9H4E7 631 aa6.87□□□□□ -1.31
HERC4-209ENST00000473533 YY1AP1Q9H869 796 aa6.87□□□□□ -1.31
HERC4-209ENST00000473533 ZCCHC17Q9NP64 241 aaKnown RBP6.87□□□□□ -1.31
HERC4-209ENST00000473533 LRP2BPQ9P2M1 347 aa6.87□□□□□ -1.31
HERC4-209ENST00000473533 RNF14Q9UBS8 474 aa6.87□□□□□ -1.31
HERC4-209ENST00000473533 MYH6P13533 1939 aa6.87□□□□□ -1.31
HERC4-209ENST00000473533 A0A087WUV0 522 aaPredicted RBP6.87□□□□□ -1.31
HERC4-209ENST00000473533 RNF40O75150 1001 aa6.87□□□□□ -1.31
HERC4-209ENST00000473533 RPN1P04843 607 aaKnown RBP6.87□□□□□ -1.31
HERC4-209ENST00000473533 PRLRP16471 622 aa6.87□□□□□ -1.31
HERC4-209ENST00000473533 STAT6P42226 847 aa6.87□□□□□ -1.31
HERC4-209ENST00000473533 PHKA1P46020 1223 aa6.87□□□□□ -1.31
HERC4-209ENST00000473533 AMPD3Q01432 767 aa6.87□□□□□ -1.31
HERC4-209ENST00000473533 KIF5AQ12840 1032 aa6.87□□□□□ -1.31
HERC4-209ENST00000473533 MTF1Q14872 753 aa6.87□□□□□ -1.31
HERC4-209ENST00000473533 COG1Q8WTW3 980 aa6.87□□□□□ -1.31
HERC4-209ENST00000473533 JAKMIP2Q96AA8 810 aa6.87□□□□□ -1.31
HERC4-209ENST00000473533 ZSCAN10Q96SZ4 725 aaPredicted RBP6.87□□□□□ -1.31
HERC4-209ENST00000473533 PNKPQ96T60 521 aa6.87□□□□□ -1.31
HERC4-209ENST00000473533 BRIP1Q9BX63 1249 aa6.87□□□□□ -1.31
HERC4-209ENST00000473533 GREM2Q9H772 168 aa6.87□□□□□ -1.31
HERC4-209ENST00000473533 FAM204AQ9H8W3 233 aa6.87□□□□□ -1.31
HERC4-209ENST00000473533 ARMT1Q9H993 441 aa6.87□□□□□ -1.31
HERC4-209ENST00000473533 EPB41L4AQ9HCS5 686 aaPredicted RBP6.87□□□□□ -1.31
HERC4-209ENST00000473533 PRDM11Q9NQV5 511 aa6.87□□□□□ -1.31
HERC4-209ENST00000473533 RSPH14Q9UHP6 348 aa6.87□□□□□ -1.31
HERC4-209ENST00000473533 TNKSO95271 1327 aa6.86□□□□□ -1.31
HERC4-209ENST00000473533 A0A1W2PQJ5 194 aa6.86□□□□□ -1.31
HERC4-209ENST00000473533 EIF3CLB5ME19 914 aaKnown RBP6.86□□□□□ -1.31
HERC4-209ENST00000473533 FXR1P51114 621 aaKnown RBP eCLIP6.86□□□□□ -1.31
HERC4-209ENST00000473533 ZBED6P86452 979 aa6.86□□□□□ -1.31
HERC4-209ENST00000473533 NR5A1Q13285 461 aa6.86□□□□□ -1.31
HERC4-209ENST00000473533 PARP10Q53GL7 1025 aa6.86□□□□□ -1.31
HERC4-209ENST00000473533 MICALCLQ6ZW33 695 aa6.86□□□□□ -1.31
HERC4-209ENST00000473533 MB21D1Q8N884 522 aa6.86□□□□□ -1.31
HERC4-209ENST00000473533 RASSF8Q8NHQ8 419 aa6.86□□□□□ -1.31
HERC4-209ENST00000473533 EIF3CQ99613 913 aaKnown RBP6.86□□□□□ -1.31
HERC4-209ENST00000473533 FAM184BQ9ULE4 1060 aa6.86□□□□□ -1.31
HERC4-209ENST00000473533 ZNF330Q9Y3S2 320 aaPredicted RBP6.86□□□□□ -1.31
HERC4-209ENST00000473533 PDS5AQ29RF7 1337 aaKnown RBP6.86□□□□□ -1.31
HERC4-209ENST00000473533 MAGEB6P1A0A0J9YX57 407 aa6.86□□□□□ -1.31
HERC4-209ENST00000473533 TCP1P17987 556 aaKnown RBP6.86□□□□□ -1.31
HERC4-209ENST00000473533 CCT6AP40227 531 aaKnown RBP6.86□□□□□ -1.31
HERC4-209ENST00000473533 ARHGAP25P42331 645 aa6.86□□□□□ -1.31
HERC4-209ENST00000473533 CORO7P57737 925 aa6.86□□□□□ -1.31
HERC4-209ENST00000473533 NLRP5P59047 1200 aa6.86□□□□□ -1.31
HERC4-209ENST00000473533 ORC2Q13416 577 aaPredicted RBP6.86□□□□□ -1.31
HERC4-209ENST00000473533 CCDC152Q4G0S7 254 aa6.86□□□□□ -1.31
HERC4-209ENST00000473533 GLE1Q53GS7 698 aaKnown RBP6.86□□□□□ -1.31
HERC4-209ENST00000473533 ALS2CLQ60I27 953 aa6.86□□□□□ -1.31
HERC4-209ENST00000473533 PI16Q6UXB8 463 aa6.86□□□□□ -1.31
HERC4-209ENST00000473533 ACRBPQ8NEB7 543 aa6.86□□□□□ -1.31
HERC4-209ENST00000473533 AK8Q96MA6 479 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 207.8 ms