RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 PRPF3O43395 683 aaKnown RBP16.06■□□□□ 0.16
NHLRC3-204ENST00000473371 AMPD2Q01433 879 aa16.06■□□□□ 0.16
NHLRC3-204ENST00000473371 UBXN1Q04323 297 aa16.06■□□□□ 0.16
NHLRC3-204ENST00000473371 TCP11X2Q5H9J9 407 aa16.06■□□□□ 0.16
NHLRC3-204ENST00000473371 CHP1Q99653 195 aa16.06■□□□□ 0.16
NHLRC3-204ENST00000473371 LTBP4Q8N2S1 1624 aa16.06■□□□□ 0.16
NHLRC3-204ENST00000473371 LRRIQ3A6PVS8 624 aaPredicted RBP16.06■□□□□ 0.16
NHLRC3-204ENST00000473371 PLEKHA8P1O95397 391 aa16.06■□□□□ 0.16
NHLRC3-204ENST00000473371 CATIPQ7Z7H3 387 aa16.06■□□□□ 0.16
NHLRC3-204ENST00000473371 WDR93Q6P2C0 686 aa16.05■□□□□ 0.16
NHLRC3-204ENST00000473371 GOLGA6L1Q8N7Z2 621 aa16.05■□□□□ 0.16
NHLRC3-204ENST00000473371 SDR42E1Q8WUS8 393 aa16.05■□□□□ 0.16
NHLRC3-204ENST00000473371 MED4Q9NPJ6 270 aa16.05■□□□□ 0.16
NHLRC3-204ENST00000473371 TRIM10Q9UDY6 481 aa16.05■□□□□ 0.16
NHLRC3-204ENST00000473371 RSPH14Q9UHP6 348 aa16.05■□□□□ 0.16
NHLRC3-204ENST00000473371 GTPBP6O43824 516 aaPredicted RBP16.05■□□□□ 0.16
NHLRC3-204ENST00000473371 NDUFA10O95299 355 aa16.05■□□□□ 0.16
NHLRC3-204ENST00000473371 MAPK8IP1Q9UQF2 711 aa16.05■□□□□ 0.16
NHLRC3-204ENST00000473371 PES1O00541 588 aaKnown RBP16.04■□□□□ 0.16
NHLRC3-204ENST00000473371 CYP7A1P22680 504 aa16.04■□□□□ 0.16
NHLRC3-204ENST00000473371 BCAMP50895 628 aa16.04■□□□□ 0.16
NHLRC3-204ENST00000473371 ATP2C1P98194 919 aaPredicted RBP16.04■□□□□ 0.16
NHLRC3-204ENST00000473371 PIGBQ92521 554 aa16.04■□□□□ 0.16
NHLRC3-204ENST00000473371 ENC1O14682 589 aa16.04■□□□□ 0.16
NHLRC3-204ENST00000473371 E2F4Q16254 413 aa16.04■□□□□ 0.16
NHLRC3-204ENST00000473371 IFIT1BQ5T764 474 aaKnown RBP16.04■□□□□ 0.16
NHLRC3-204ENST00000473371 FOXR1Q6PIV2 292 aa16.04■□□□□ 0.16
NHLRC3-204ENST00000473371 ENAHQ8N8S7 591 aaPredicted RBP16.04■□□□□ 0.16
NHLRC3-204ENST00000473371 ZSCAN10Q96SZ4 725 aaPredicted RBP16.04■□□□□ 0.16
NHLRC3-204ENST00000473371 FAM204AQ9H8W3 233 aa16.04■□□□□ 0.16
NHLRC3-204ENST00000473371 RPS6KA5O75582 802 aa16.04■□□□□ 0.16
NHLRC3-204ENST00000473371 FUT2Q10981 343 aa16.04■□□□□ 0.16
NHLRC3-204ENST00000473371 TSR1Q2NL82 804 aaKnown RBP16.04■□□□□ 0.16
NHLRC3-204ENST00000473371 CARD10Q9BWT7 1032 aa16.04■□□□□ 0.16
NHLRC3-204ENST00000473371 REXO2Q9Y3B8 237 aaKnown RBP16.04■□□□□ 0.16
NHLRC3-204ENST00000473371 DOCK2Q92608 1830 aa16.03■□□□□ 0.16
NHLRC3-204ENST00000473371 USP14P54578 494 aa16.03■□□□□ 0.16
NHLRC3-204ENST00000473371 ZNF658Q5TYW1 1059 aaPredicted RBP16.03■□□□□ 0.16
NHLRC3-204ENST00000473371 PDXDC2PQ6P474 469 aa16.03■□□□□ 0.16
NHLRC3-204ENST00000473371 TRAPPC11Q7Z392 1133 aa16.03■□□□□ 0.16
NHLRC3-204ENST00000473371 PYM1Q9BRP8 204 aaKnown RBP16.03■□□□□ 0.16
NHLRC3-204ENST00000473371 RBM28Q9NW13 759 aaKnown RBP16.03■□□□□ 0.16
NHLRC3-204ENST00000473371 RMND1Q9NWS8 449 aa16.03■□□□□ 0.16
NHLRC3-204ENST00000473371 HDAC6Q9UBN7 1215 aa16.03■□□□□ 0.16
NHLRC3-204ENST00000473371 BCL9LQ86UU0 1499 aa16.03■□□□□ 0.16
NHLRC3-204ENST00000473371 SMIM22K7EJ46 135 aa16.03■□□□□ 0.16
NHLRC3-204ENST00000473371 OR8K1Q8NGG5 319 aa16.03■□□□□ 0.16
NHLRC3-204ENST00000473371 HAUS4Q9H6D7 363 aa16.03■□□□□ 0.16
NHLRC3-204ENST00000473371 GDAQ9Y2T3 454 aa16.03■□□□□ 0.16
NHLRC3-204ENST00000473371 RPN1P04843 607 aaKnown RBP16.02■□□□□ 0.16
NHLRC3-204ENST00000473371 MKRN1Q9UHC7 482 aaKnown RBP16.02■□□□□ 0.16
NHLRC3-204ENST00000473371 LUC7L2Q9Y383 392 aaKnown RBP16.02■□□□□ 0.16
NHLRC3-204ENST00000473371 TTC26A0AVF1 554 aa16.02■□□□□ 0.16
NHLRC3-204ENST00000473371 MCM3P25205 808 aa16.02■□□□□ 0.16
NHLRC3-204ENST00000473371 MCM7P33993 719 aa16.02■□□□□ 0.16
NHLRC3-204ENST00000473371 MAP9Q49MG5 647 aa16.02■□□□□ 0.16
NHLRC3-204ENST00000473371 CCDC122Q5T0U0 273 aa16.02■□□□□ 0.16
NHLRC3-204ENST00000473371 PIK3AP1Q6ZUJ8 805 aa16.02■□□□□ 0.16
NHLRC3-204ENST00000473371 CTCFLQ8NI51 663 aaPredicted RBP16.02■□□□□ 0.16
NHLRC3-204ENST00000473371 TNFRSF25Q93038 417 aa16.02■□□□□ 0.16
NHLRC3-204ENST00000473371 MTRQ99707 1265 aa16.02■□□□□ 0.16
NHLRC3-204ENST00000473371 SOS2Q07890 1332 aaPredicted RBP16.02■□□□□ 0.15
NHLRC3-204ENST00000473371 PSMD14O00487 310 aa16.02■□□□□ 0.15
NHLRC3-204ENST00000473371 RNF40O75150 1001 aa16.02■□□□□ 0.15
NHLRC3-204ENST00000473371 PARP1P09874 1014 aaKnown RBP16.02■□□□□ 0.15
NHLRC3-204ENST00000473371 CADPS2Q86UW7 1296 aa16.02■□□□□ 0.15
NHLRC3-204ENST00000473371 IQSEC3Q9UPP2 1182 aaPredicted RBP16.02■□□□□ 0.15
NHLRC3-204ENST00000473371 SAR1BQ9Y6B6 198 aa16.02■□□□□ 0.15
NHLRC3-204ENST00000473371 H7C1D1 291 aa16.01■□□□□ 0.15
NHLRC3-204ENST00000473371 PRCPP42785 496 aa16.01■□□□□ 0.15
NHLRC3-204ENST00000473371 NLRP5P59047 1200 aa16.01■□□□□ 0.15
NHLRC3-204ENST00000473371 LRRC31Q6UY01 552 aa16.01■□□□□ 0.15
NHLRC3-204ENST00000473371 CAPZA3Q96KX2 299 aa16.01■□□□□ 0.15
NHLRC3-204ENST00000473371 MMS19Q96T76 1030 aa16.01■□□□□ 0.15
NHLRC3-204ENST00000473371 VIPAS39Q9H9C1 493 aa16.01■□□□□ 0.15
NHLRC3-204ENST00000473371 ABCF2Q9UG63 623 aa16.01■□□□□ 0.15
NHLRC3-204ENST00000473371 ZBTB1Q9Y2K1 713 aa16.01■□□□□ 0.15
NHLRC3-204ENST00000473371 MAGEB6P1A0A0J9YX57 407 aa16.01■□□□□ 0.15
NHLRC3-204ENST00000473371 ATP1A1P05023 1023 aaKnown RBP16.01■□□□□ 0.15
NHLRC3-204ENST00000473371 EVA1CP58658 441 aa16.01■□□□□ 0.15
NHLRC3-204ENST00000473371 NPY5RQ15761 445 aa16.01■□□□□ 0.15
NHLRC3-204ENST00000473371 KIAA1328Q86T90 577 aa16.01■□□□□ 0.15
NHLRC3-204ENST00000473371 IQCA1Q86XH1 822 aa16.01■□□□□ 0.15
NHLRC3-204ENST00000473371 AFAP1L1Q8TED9 768 aa16.01■□□□□ 0.15
NHLRC3-204ENST00000473371 ANAPC4Q9UJX5 808 aa16.01■□□□□ 0.15
NHLRC3-204ENST00000473371 TFR2Q9UP52 801 aa16.01■□□□□ 0.15
NHLRC3-204ENST00000473371 COL5A2P05997 1499 aaPredicted RBP16.01■□□□□ 0.15
NHLRC3-204ENST00000473371 ARAP2Q8WZ64 1704 aa16■□□□□ 0.15
NHLRC3-204ENST00000473371 SRGAP2O75044 1071 aa16■□□□□ 0.15
NHLRC3-204ENST00000473371 CALM1P0DP23 149 aa16■□□□□ 0.15
NHLRC3-204ENST00000473371 CALM2P0DP24 149 aa16■□□□□ 0.15
NHLRC3-204ENST00000473371 CALM3P0DP25 149 aa16■□□□□ 0.15
NHLRC3-204ENST00000473371 ADGRA1Q86SQ6 560 aa16■□□□□ 0.15
NHLRC3-204ENST00000473371 MB21D1Q8N884 522 aa16■□□□□ 0.15
NHLRC3-204ENST00000473371 BCORQ6W2J9 1755 aa16■□□□□ 0.15
NHLRC3-204ENST00000473371 MYH2Q9UKX2 1941 aa16■□□□□ 0.15
NHLRC3-204ENST00000473371 CYP2D7A0A087X1C5 515 aa16■□□□□ 0.15
NHLRC3-204ENST00000473371 TRIM49BA6NDI0 452 aa16■□□□□ 0.15
NHLRC3-204ENST00000473371 DZIP3Q86Y13 1208 aaKnown RBP16■□□□□ 0.15
NHLRC3-204ENST00000473371 HERVK_113P62684 666 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms