RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 OPTNQ96CV9 577 aa10.81□□□□□ -0.68
SMC4-214ENST00000472991 JAG1P78504 1218 aa10.8□□□□□ -0.68
SMC4-214ENST00000472991 NOGQ13253 232 aa10.8□□□□□ -0.68
SMC4-214ENST00000472991 SPRYD7Q5W111 196 aa10.8□□□□□ -0.68
SMC4-214ENST00000472991 ERO1BQ86YB8 467 aa10.8□□□□□ -0.68
SMC4-214ENST00000472991 DNAJC5GQ8N7S2 189 aa10.8□□□□□ -0.68
SMC4-214ENST00000472991 ZIC5Q96T25 663 aa10.8□□□□□ -0.68
SMC4-214ENST00000472991 PICK1Q9NRD5 415 aa10.8□□□□□ -0.68
SMC4-214ENST00000472991 ZBTB21Q9ULJ3 1066 aa10.8□□□□□ -0.68
SMC4-214ENST00000472991 MPHOSPH10O00566 681 aaKnown RBP10.79□□□□□ -0.68
SMC4-214ENST00000472991 PRDM1O75626 825 aa10.79□□□□□ -0.68
SMC4-214ENST00000472991 GH2P01242 217 aa10.79□□□□□ -0.68
SMC4-214ENST00000472991 SLC3A2P08195 630 aaKnown RBP10.79□□□□□ -0.68
SMC4-214ENST00000472991 ASNSP08243 561 aa10.79□□□□□ -0.68
SMC4-214ENST00000472991 ZBTB48P10074 688 aaPredicted RBP10.79□□□□□ -0.68
SMC4-214ENST00000472991 AKR1B1P15121 316 aa10.79□□□□□ -0.68
SMC4-214ENST00000472991 PTPRAP18433 802 aa10.79□□□□□ -0.68
SMC4-214ENST00000472991 PPATQ06203 517 aa10.79□□□□□ -0.68
SMC4-214ENST00000472991 PDE4BQ07343 736 aa10.79□□□□□ -0.68
SMC4-214ENST00000472991 PPIL2Q13356 520 aa10.79□□□□□ -0.68
SMC4-214ENST00000472991 ABCB5Q2M3G0 1257 aa10.79□□□□□ -0.68
SMC4-214ENST00000472991 KIAA1211Q6ZU35 1233 aa10.79□□□□□ -0.68
SMC4-214ENST00000472991 LSG1Q9H089 658 aaKnown RBP10.79□□□□□ -0.68
SMC4-214ENST00000472991 MKNK2Q9HBH9 465 aa10.79□□□□□ -0.68
SMC4-214ENST00000472991 ANO2Q9NQ90 1003 aa10.79□□□□□ -0.68
SMC4-214ENST00000472991 ANAPC4Q9UJX5 808 aa10.79□□□□□ -0.68
SMC4-214ENST00000472991 TACC3Q9Y6A5 838 aa10.79□□□□□ -0.68
SMC4-214ENST00000472991 PCNTO95613 3336 aa10.79□□□□□ -0.68
SMC4-214ENST00000472991 IRF6O14896 467 aa10.78□□□□□ -0.68
SMC4-214ENST00000472991 RASA1P20936 1047 aa10.78□□□□□ -0.68
SMC4-214ENST00000472991 SLC19A1P41440 591 aa10.78□□□□□ -0.68
SMC4-214ENST00000472991 GCGRP47871 477 aa10.78□□□□□ -0.68
SMC4-214ENST00000472991 FUT2Q10981 343 aa10.78□□□□□ -0.68
SMC4-214ENST00000472991 MAP2K5Q13163 448 aa10.78□□□□□ -0.68
SMC4-214ENST00000472991 IMMTQ16891 758 aaKnown RBP10.78□□□□□ -0.68
SMC4-214ENST00000472991 MORN1Q5T089 497 aa10.78□□□□□ -0.68
SMC4-214ENST00000472991 CLEC10AQ8IUN9 316 aa10.78□□□□□ -0.68
SMC4-214ENST00000472991 TBC1D10CQ8IV04 446 aa10.78□□□□□ -0.68
SMC4-214ENST00000472991 CABP5Q9NP86 173 aa10.78□□□□□ -0.68
SMC4-214ENST00000472991 CTNNA3Q9UI47 895 aa10.78□□□□□ -0.68
SMC4-214ENST00000472991 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.78□□□□□ -0.682e-144■■■■■ 553.7
SMC4-214ENST00000472991 RBM8AQ9Y5S9 174 aaKnown RBP10.78□□□□□ -0.68
SMC4-214ENST00000472991 ZHX2Q9Y6X8 837 aa10.78□□□□□ -0.68
SMC4-214ENST00000472991 COL11A1P12107 1806 aaPredicted RBP10.77□□□□□ -0.68
SMC4-214ENST00000472991 USP17L5A8MUK1 530 aa10.77□□□□□ -0.69
SMC4-214ENST00000472991 TULP1O00294 542 aaPredicted RBP10.77□□□□□ -0.69
SMC4-214ENST00000472991 ZNF213O14771 459 aa10.77□□□□□ -0.69
SMC4-214ENST00000472991 GUCY1A2P33402 732 aa10.77□□□□□ -0.69
SMC4-214ENST00000472991 KIF23Q02241 960 aaPredicted RBP10.77□□□□□ -0.69
SMC4-214ENST00000472991 SEPT2Q15019 361 aa10.77□□□□□ -0.69
SMC4-214ENST00000472991 RAB3GAP1Q15042 981 aa10.77□□□□□ -0.69
SMC4-214ENST00000472991 TMEM179Q6ZVK1 233 aa10.77□□□□□ -0.69
SMC4-214ENST00000472991 MAP4K1Q92918 833 aa10.77□□□□□ -0.69
SMC4-214ENST00000472991 CCDC17Q96LX7 622 aa10.77□□□□□ -0.69
SMC4-214ENST00000472991 SLC6A16Q9GZN6 736 aa10.77□□□□□ -0.69
SMC4-214ENST00000472991 ZNF287Q9HBT7 754 aa10.77□□□□□ -0.69
SMC4-214ENST00000472991 INCENPQ9NQS7 918 aa10.77□□□□□ -0.69
SMC4-214ENST00000472991 TOMM22Q9NS69 142 aa10.77□□□□□ -0.69
SMC4-214ENST00000472991 GINM1Q9NU53 330 aa10.77□□□□□ -0.69
SMC4-214ENST00000472991 NEDD4P46934 1319 aa10.77□□□□□ -0.69
SMC4-214ENST00000472991 MYH6P13533 1939 aa10.76□□□□□ -0.69
SMC4-214ENST00000472991 RLFQ13129 1914 aa10.76□□□□□ -0.69
SMC4-214ENST00000472991 MANSC4A6NHS7 340 aaPredicted RBP10.76□□□□□ -0.69
SMC4-214ENST00000472991 TRIM75PA6NK02 468 aa10.76□□□□□ -0.69
SMC4-214ENST00000472991 ORC4O43929 436 aa10.76□□□□□ -0.69
SMC4-214ENST00000472991 CYP21A2P08686 494 aa10.76□□□□□ -0.69
SMC4-214ENST00000472991 MAP2K2P36507 400 aa10.76□□□□□ -0.69
SMC4-214ENST00000472991 FAM47AQ5JRC9 791 aa10.76□□□□□ -0.69
SMC4-214ENST00000472991 RRP12Q5JTH9 1297 aaKnown RBP10.76□□□□□ -0.69
SMC4-214ENST00000472991 AKNAD1Q5T1N1 836 aa10.76□□□□□ -0.69
SMC4-214ENST00000472991 ZNF444Q8N0Y2 327 aaPredicted RBP10.76□□□□□ -0.69
SMC4-214ENST00000472991 ZNF280CQ8ND82 737 aa10.76□□□□□ -0.69
SMC4-214ENST00000472991 STAG1Q8WVM7 1258 aa10.76□□□□□ -0.69
SMC4-214ENST00000472991 SPSB2Q99619 263 aa10.76□□□□□ -0.69
SMC4-214ENST00000472991 TBC1D2Q9BYX2 928 aa10.76□□□□□ -0.69
SMC4-214ENST00000472991 AS3MTQ9HBK9 375 aa10.76□□□□□ -0.69
SMC4-214ENST00000472991 KCNH4Q9UQ05 1017 aa10.76□□□□□ -0.69
SMC4-214ENST00000472991 AFG3L2Q9Y4W6 797 aa10.76□□□□□ -0.69
SMC4-214ENST00000472991 MGAMO43451 1857 aa10.76□□□□□ -0.69
SMC4-214ENST00000472991 PLIN4Q96Q06 1357 aa10.76□□□□□ -0.69
SMC4-214ENST00000472991 CCL15-CCL14A0A0B4J2E2 113 aa10.75□□□□□ -0.69
SMC4-214ENST00000472991 RANBP6O60518 1105 aaKnown RBP10.75□□□□□ -0.69
SMC4-214ENST00000472991 FGRP09769 529 aa10.75□□□□□ -0.69
SMC4-214ENST00000472991 TSPY3P0CV98 308 aa10.75□□□□□ -0.69
SMC4-214ENST00000472991 TSPY8P0CW00 308 aa10.75□□□□□ -0.69
SMC4-214ENST00000472991 GTF2A2P52657 109 aa10.75□□□□□ -0.69
SMC4-214ENST00000472991 ICA1Q05084 483 aa10.75□□□□□ -0.69
SMC4-214ENST00000472991 SREBF2Q12772 1141 aa10.75□□□□□ -0.69
SMC4-214ENST00000472991 SPP2Q13103 211 aa10.75□□□□□ -0.69
SMC4-214ENST00000472991 SNAPC2Q13487 334 aa10.75□□□□□ -0.69
SMC4-214ENST00000472991 DGKZQ13574 1117 aa10.75□□□□□ -0.69
SMC4-214ENST00000472991 CCL15Q16663 113 aa10.75□□□□□ -0.69
SMC4-214ENST00000472991 MFSD6Q6ZSS7 791 aa10.75□□□□□ -0.69
SMC4-214ENST00000472991 TRIM67Q6ZTA4 783 aa10.75□□□□□ -0.69
SMC4-214ENST00000472991 BRI3BPQ8WY22 251 aa10.75□□□□□ -0.69
SMC4-214ENST00000472991 THAP11Q96EK4 314 aa10.75□□□□□ -0.69
SMC4-214ENST00000472991 FEZ1Q99689 392 aa10.75□□□□□ -0.69
SMC4-214ENST00000472991 WDR18Q9BV38 432 aa10.75□□□□□ -0.69
SMC4-214ENST00000472991 RNF41Q9H4P4 317 aaPredicted RBP10.75□□□□□ -0.69
SMC4-214ENST00000472991 TAF6LQ9Y6J9 622 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms