RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 TANGO6Q9C0B7 1094 aa19.65■□□□□ 0.74
CCM2-205ENST00000472223 SENP2Q9HC62 589 aa19.65■□□□□ 0.74
CCM2-205ENST00000472223 SH2B1Q9NRF2 756 aaPredicted RBP19.65■□□□□ 0.74
CCM2-205ENST00000472223 BRPF3Q9ULD4 1205 aa19.65■□□□□ 0.74
CCM2-205ENST00000472223 CCL15-CCL14A0A0B4J2E2 113 aa19.64■□□□□ 0.73
CCM2-205ENST00000472223 PDHBP11177 359 aa19.64■□□□□ 0.73
CCM2-205ENST00000472223 HSPA6P17066 643 aa19.64■□□□□ 0.73
CCM2-205ENST00000472223 CCL15Q16663 113 aa19.64■□□□□ 0.73
CCM2-205ENST00000472223 RTN1Q16799 776 aa19.64■□□□□ 0.73
CCM2-205ENST00000472223 CYP4F22Q6NT55 531 aa19.64■□□□□ 0.73
CCM2-205ENST00000472223 CHURC1Q8WUH1 139 aa19.64■□□□□ 0.73
CCM2-205ENST00000472223 CAPNS2Q96L46 248 aa19.64■□□□□ 0.73
CCM2-205ENST00000472223 LZTS2Q9BRK4 669 aa19.64■□□□□ 0.73
CCM2-205ENST00000472223 LARP6Q9BRS8 491 aaKnown RBP19.64■□□□□ 0.73
CCM2-205ENST00000472223 EMILIN3Q9NT22 766 aa19.64■□□□□ 0.73
CCM2-205ENST00000472223 USP17L15C9J2P7 530 aa19.63■□□□□ 0.73
CCM2-205ENST00000472223 USP17L13C9JLJ4 530 aa19.63■□□□□ 0.73
CCM2-205ENST00000472223 USP17L11C9JVI0 530 aa19.63■□□□□ 0.73
CCM2-205ENST00000472223 USP17L18D6R9N7 530 aa19.63■□□□□ 0.73
CCM2-205ENST00000472223 USP17L22D6RA61 530 aa19.63■□□□□ 0.73
CCM2-205ENST00000472223 USP17L17D6RBQ6 530 aa19.63■□□□□ 0.73
CCM2-205ENST00000472223 USP17L19D6RCP7 530 aa19.63■□□□□ 0.73
CCM2-205ENST00000472223 USP17L20D6RJB6 530 aa19.63■□□□□ 0.73
CCM2-205ENST00000472223 CPLX1O14810 134 aa19.63■□□□□ 0.73
CCM2-205ENST00000472223 OSBPP22059 807 aa19.63■□□□□ 0.73
CCM2-205ENST00000472223 PDIA3P30101 505 aaKnown RBP19.63■□□□□ 0.73
CCM2-205ENST00000472223 GJA5P36382 358 aa19.63■□□□□ 0.73
CCM2-205ENST00000472223 ANP32AP39687 249 aaKnown RBP19.63■□□□□ 0.73
CCM2-205ENST00000472223 USP17L24Q0WX57 530 aa19.63■□□□□ 0.73
CCM2-205ENST00000472223 TROAPQ12815 778 aa19.63■□□□□ 0.73
CCM2-205ENST00000472223 STK3Q13188 491 aa19.63■□□□□ 0.73
CCM2-205ENST00000472223 BECN1Q14457 450 aa19.63■□□□□ 0.73
CCM2-205ENST00000472223 GRM4Q14833 912 aa19.63■□□□□ 0.73
CCM2-205ENST00000472223 CCDC144CPQ8IYA2 1237 aa19.63■□□□□ 0.73
CCM2-205ENST00000472223 MYL10Q9BUA6 226 aa19.63■□□□□ 0.73
CCM2-205ENST00000472223 RPAP3Q9H6T3 665 aaPredicted RBP19.63■□□□□ 0.73
CCM2-205ENST00000472223 FEM1BQ9UK73 627 aa19.63■□□□□ 0.73
CCM2-205ENST00000472223 PNMA3Q9UL41 463 aa19.63■□□□□ 0.73
CCM2-205ENST00000472223 CTDP1Q9Y5B0 961 aaPredicted RBP19.63■□□□□ 0.73
CCM2-205ENST00000472223 VCAM1P19320 739 aa19.62■□□□□ 0.73
CCM2-205ENST00000472223 ZNF543Q08ER8 600 aa19.62■□□□□ 0.73
CCM2-205ENST00000472223 FAM83BQ5T0W9 1011 aa19.62■□□□□ 0.73
CCM2-205ENST00000472223 FAM160B2Q86V87 743 aa19.62■□□□□ 0.73
CCM2-205ENST00000472223 GPCPD1Q9NPB8 672 aa19.62■□□□□ 0.73
CCM2-205ENST00000472223 TPCN1Q9ULQ1 816 aa19.62■□□□□ 0.73
CCM2-205ENST00000472223 AGTPBP1Q9UPW5 1226 aa19.62■□□□□ 0.73
CCM2-205ENST00000472223 FRMPD2Q68DX3 1309 aaPredicted RBP19.61■□□□□ 0.73
CCM2-205ENST00000472223 TMEM232C9JQI7 657 aa19.61■□□□□ 0.73
CCM2-205ENST00000472223 KLRF2D3W0D1 207 aa19.61■□□□□ 0.73
CCM2-205ENST00000472223 CDKL5O76039 1030 aa19.61■□□□□ 0.73
CCM2-205ENST00000472223 SNHG28P0DPA3 235 aa19.61■□□□□ 0.73
CCM2-205ENST00000472223 RXRAP19793 462 aa19.61■□□□□ 0.73
CCM2-205ENST00000472223 STAT2P52630 851 aa19.61■□□□□ 0.73
CCM2-205ENST00000472223 CCT2P78371 535 aaKnown RBP19.61■□□□□ 0.73
CCM2-205ENST00000472223 IRX3P78415 501 aaPredicted RBP19.61■□□□□ 0.73
CCM2-205ENST00000472223 KCTD1Q719H9 257 aa19.61■□□□□ 0.73
CCM2-205ENST00000472223 RAB11FIP4Q86YS3 637 aa19.61■□□□□ 0.73
CCM2-205ENST00000472223 SNX21Q969T3 373 aa19.61■□□□□ 0.73
CCM2-205ENST00000472223 HOXC10Q9NYD6 342 aa19.61■□□□□ 0.73
CCM2-205ENST00000472223 WDR33Q9C0J8 1336 aaKnown RBP19.6■□□□□ 0.73
CCM2-205ENST00000472223 FAM155AB1AL88 458 aaPredicted RBP19.6■□□□□ 0.73
CCM2-205ENST00000472223 PFKFB2O60825 505 aa19.6■□□□□ 0.73
CCM2-205ENST00000472223 FLOT1O75955 427 aa19.6■□□□□ 0.73
CCM2-205ENST00000472223 GOLGA8HP0CJ92 632 aa19.6■□□□□ 0.73
CCM2-205ENST00000472223 AKAP17AQ02040 695 aaKnown RBP19.6■□□□□ 0.73
CCM2-205ENST00000472223 SAMD1Q6SPF0 538 aaPredicted RBP19.6■□□□□ 0.73
CCM2-205ENST00000472223 MS4A4AQ96JQ5 239 aa19.6■□□□□ 0.73
CCM2-205ENST00000472223 NUP88Q99567 741 aaPredicted RBP19.6■□□□□ 0.73
CCM2-205ENST00000472223 DAXXQ9UER7 740 aaPredicted RBP19.6■□□□□ 0.73
CCM2-205ENST00000472223 SLC45A1Q9Y2W3 748 aa19.6■□□□□ 0.73
CCM2-205ENST00000472223 PTPRFP10586 1907 aa19.6■□□□□ 0.73
CCM2-205ENST00000472223 PALM3A6NDB9 673 aaPredicted RBP19.59■□□□□ 0.73
CCM2-205ENST00000472223 HSP90AA1P07900 732 aaKnown RBP19.59■□□□□ 0.73
CCM2-205ENST00000472223 MAP2K2P36507 400 aa19.59■□□□□ 0.73
CCM2-205ENST00000472223 KIF23Q02241 960 aaPredicted RBP19.59■□□□□ 0.73
CCM2-205ENST00000472223 COG2Q14746 738 aa19.59■□□□□ 0.73
CCM2-205ENST00000472223 ME3Q16798 604 aa19.59■□□□□ 0.73
CCM2-205ENST00000472223 ANKRD23Q86SG2 305 aa19.59■□□□□ 0.73
CCM2-205ENST00000472223 PRPF38AQ8NAV1 312 aaKnown RBP19.59■□□□□ 0.73
CCM2-205ENST00000472223 MAD2L2Q9UI95 211 aa19.59■□□□□ 0.73
CCM2-205ENST00000472223 TESPA1A2RU30 521 aaPredicted RBP19.58■□□□□ 0.72
CCM2-205ENST00000472223 K7ELQ4 463 aaPredicted RBP19.58■□□□□ 0.72
CCM2-205ENST00000472223 PLA2G6O60733 806 aa19.58■□□□□ 0.72
CCM2-205ENST00000472223 FDX1P10109 184 aa19.58■□□□□ 0.72
CCM2-205ENST00000472223 SMARCA1P28370 1054 aa19.58■□□□□ 0.72
CCM2-205ENST00000472223 HOXA7P31268 230 aaPredicted RBP19.58■□□□□ 0.72
CCM2-205ENST00000472223 DGKZQ13574 1117 aa19.58■□□□□ 0.72
CCM2-205ENST00000472223 KIAA1755Q5JYT7 1200 aa19.58■□□□□ 0.72
CCM2-205ENST00000472223 CATSPERGQ6ZRH7 1159 aa19.58■□□□□ 0.72
CCM2-205ENST00000472223 TRIM22Q8IYM9 498 aa19.58■□□□□ 0.72
CCM2-205ENST00000472223 BRI3BPQ8WY22 251 aa19.58■□□□□ 0.72
CCM2-205ENST00000472223 KIFC2Q96AC6 838 aa19.58■□□□□ 0.72
CCM2-205ENST00000472223 SLF1Q9BQI6 1058 aa19.58■□□□□ 0.72
CCM2-205ENST00000472223 ZCCHC17Q9NP64 241 aaKnown RBP19.58■□□□□ 0.72
CCM2-205ENST00000472223 LOC285556D6RIA3 1793 aa19.57■□□□□ 0.72
CCM2-205ENST00000472223 PDHXO00330 501 aa19.57■□□□□ 0.72
CCM2-205ENST00000472223 ALDH1A1P00352 501 aa19.57■□□□□ 0.72
CCM2-205ENST00000472223 TREML2Q5T2D2 321 aa19.57■□□□□ 0.72
CCM2-205ENST00000472223 GTF3C2Q8WUA4 911 aaPredicted RBP19.57■□□□□ 0.72
CCM2-205ENST00000472223 GTF3C6Q969F1 213 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms