RNA–Protein interactions for RNA: ENST00000471887.1

HDAC9-221, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-221ENST00000471887 PPFIBP1Q86W92 1011 aa8.23□□□□□ -1.09
HDAC9-221ENST00000471887 CREG2Q8IUH2 290 aa8.23□□□□□ -1.09
HDAC9-221ENST00000471887 SYTL5Q8TDW5 730 aaPredicted RBP8.23□□□□□ -1.09
HDAC9-221ENST00000471887 PRDM14Q9GZV8 571 aa8.23□□□□□ -1.09
HDAC9-221ENST00000471887 FBXL21Q9UKT6 434 aa8.23□□□□□ -1.09
HDAC9-221ENST00000471887 SIGLEC6O43699 453 aa8.22□□□□□ -1.09
HDAC9-221ENST00000471887 ZNF792Q3KQV3 632 aa8.22□□□□□ -1.09
HDAC9-221ENST00000471887 GNPTABQ3T906 1256 aa8.22□□□□□ -1.09
HDAC9-221ENST00000471887 C7orf61Q8IZ16 206 aa8.22□□□□□ -1.09
HDAC9-221ENST00000471887 HDAC8Q9BY41 377 aa8.22□□□□□ -1.09
HDAC9-221ENST00000471887 PRKAG3Q9UGI9 489 aa8.22□□□□□ -1.09
HDAC9-221ENST00000471887 SMAD7O15105 426 aaKnown RBP8.21□□□□□ -1.1
HDAC9-221ENST00000471887 ESR1P03372 595 aa8.21□□□□□ -1.1
HDAC9-221ENST00000471887 TP53P04637 393 aaPredicted RBP8.21□□□□□ -1.1
HDAC9-221ENST00000471887 LTKP29376 864 aa8.21□□□□□ -1.1
HDAC9-221ENST00000471887 ETFBP38117 255 aa8.21□□□□□ -1.1
HDAC9-221ENST00000471887 ANKRD39Q53RE8 183 aa8.21□□□□□ -1.1
HDAC9-221ENST00000471887 ZNF655Q8N720 491 aaPredicted RBP8.21□□□□□ -1.1
HDAC9-221ENST00000471887 DAGLBQ8NCG7 672 aa8.21□□□□□ -1.1
HDAC9-221ENST00000471887 ZNF408Q9H9D4 720 aa8.21□□□□□ -1.1
HDAC9-221ENST00000471887 FAM86C1Q9NVL1 165 aa8.21□□□□□ -1.1
HDAC9-221ENST00000471887 ACTR10Q9NZ32 417 aa8.21□□□□□ -1.1
HDAC9-221ENST00000471887 PRR13Q9NZ81 148 aa8.21□□□□□ -1.1
HDAC9-221ENST00000471887 PRAMEF1O95521 474 aa8.2□□□□□ -1.1
HDAC9-221ENST00000471887 SLC7A5Q01650 507 aa8.2□□□□□ -1.1
HDAC9-221ENST00000471887 AXDND1Q5T1B0 1012 aaPredicted RBP8.2□□□□□ -1.1
HDAC9-221ENST00000471887 DCAF15Q66K64 600 aa8.2□□□□□ -1.1
HDAC9-221ENST00000471887 PRDM7Q9NQW5 492 aa8.2□□□□□ -1.1
HDAC9-221ENST00000471887 CHST7Q9NS84 486 aa8.2□□□□□ -1.1
HDAC9-221ENST00000471887 MBNL3Q9NUK0 354 aaKnown RBP8.2□□□□□ -1.1
HDAC9-221ENST00000471887 ADGRE2Q9UHX3 823 aa8.2□□□□□ -1.1
HDAC9-221ENST00000471887 PCDHB10Q9UN67 800 aa8.2□□□□□ -1.1
HDAC9-221ENST00000471887 SHOXO15266 292 aa8.19□□□□□ -1.1
HDAC9-221ENST00000471887 RNASE1P07998 156 aaKnown RBP8.19□□□□□ -1.1
HDAC9-221ENST00000471887 IRAK1P51617 712 aa8.19□□□□□ -1.1
HDAC9-221ENST00000471887 EGR3Q06889 387 aa8.19□□□□□ -1.1
HDAC9-221ENST00000471887 VHLLQ6RSH7 139 aa8.19□□□□□ -1.1
HDAC9-221ENST00000471887 TANGO6Q9C0B7 1094 aa8.19□□□□□ -1.1
HDAC9-221ENST00000471887 RC3H2Q9HBD1 1191 aaKnown RBP8.19□□□□□ -1.1
HDAC9-221ENST00000471887 GFOD1Q9NXC2 390 aa8.19□□□□□ -1.1
HDAC9-221ENST00000471887 ADAMTS6Q9UKP5 1117 aa8.19□□□□□ -1.1
HDAC9-221ENST00000471887 PCDHA11Q9Y5I1 949 aa8.19□□□□□ -1.1
HDAC9-221ENST00000471887 TCEAL1Q15170 157 aa8.18□□□□□ -1.1
HDAC9-221ENST00000471887 NOL9Q5SY16 702 aaKnown RBP8.18□□□□□ -1.1
HDAC9-221ENST00000471887 CBLL1Q75N03 491 aa8.18□□□□□ -1.1
HDAC9-221ENST00000471887 TCTN2Q96GX1 697 aa8.18□□□□□ -1.1
HDAC9-221ENST00000471887 CCDC120Q96HB5 630 aa8.18□□□□□ -1.1
HDAC9-221ENST00000471887 ALPK1Q96QP1 1244 aa8.18□□□□□ -1.1
HDAC9-221ENST00000471887 HAUS7Q99871 368 aa8.18□□□□□ -1.1
HDAC9-221ENST00000471887 DSCC1Q9BVC3 393 aa8.18□□□□□ -1.1
HDAC9-221ENST00000471887 GP6Q9HCN6 339 aa8.18□□□□□ -1.1
HDAC9-221ENST00000471887 R3HCC1Q9Y3T6 440 aaKnown RBP8.18□□□□□ -1.1
HDAC9-221ENST00000471887 SSU72P8A0A1W2PR75 194 aa8.17□□□□□ -1.1
HDAC9-221ENST00000471887 CD247P20963 164 aa8.17□□□□□ -1.1
HDAC9-221ENST00000471887 PCBP3P57721 371 aaKnown RBP8.17□□□□□ -1.1
HDAC9-221ENST00000471887 HEATR6Q6AI08 1181 aaKnown RBP8.17□□□□□ -1.1
HDAC9-221ENST00000471887 KLHL6Q8WZ60 621 aa8.17□□□□□ -1.1
HDAC9-221ENST00000471887 SYTL4Q96C24 671 aaPredicted RBP8.17□□□□□ -1.1
HDAC9-221ENST00000471887 CBFA2T2O43439 604 aa8.16□□□□□ -1.1
HDAC9-221ENST00000471887 ITGA4P13612 1032 aa8.16□□□□□ -1.1
HDAC9-221ENST00000471887 ATP2B1P20020 1258 aa8.16□□□□□ -1.1
HDAC9-221ENST00000471887 NCAPHQ15003 741 aa8.16□□□□□ -1.1
HDAC9-221ENST00000471887 LARP1BQ659C4 914 aaKnown RBP8.16□□□□□ -1.1
HDAC9-221ENST00000471887 KIAA1211LQ6NV74 962 aa8.16□□□□□ -1.1
HDAC9-221ENST00000471887 RNF111Q6ZNA4 994 aa8.16□□□□□ -1.1
HDAC9-221ENST00000471887 USHBP1Q8N6Y0 703 aa8.16□□□□□ -1.1
HDAC9-221ENST00000471887 LINC00116Q8NCU8 138 aa8.16□□□□□ -1.1
HDAC9-221ENST00000471887 LRRN4CLQ8ND94 238 aa8.16□□□□□ -1.1
HDAC9-221ENST00000471887 GBP3Q9H0R5 595 aa8.16□□□□□ -1.1
HDAC9-221ENST00000471887 SLAMF8Q9P0V8 285 aa8.16□□□□□ -1.1
HDAC9-221ENST00000471887 MINPP1Q9UNW1 487 aa8.16□□□□□ -1.1
HDAC9-221ENST00000471887 ZNF451Q9Y4E5 1061 aa8.16□□□□□ -1.1
HDAC9-221ENST00000471887 MEIS1O00470 390 aa8.15□□□□□ -1.1
HDAC9-221ENST00000471887 FXNQ16595 210 aa8.15□□□□□ -1.1
HDAC9-221ENST00000471887 TMEM59LQ9UK28 342 aa8.15□□□□□ -1.1
HDAC9-221ENST00000471887 TCFL5Q9UL49 500 aa8.15□□□□□ -1.1
HDAC9-221ENST00000471887 FHOD1Q9Y613 1164 aa8.15□□□□□ -1.1
HDAC9-221ENST00000471887 STK10O94804 968 aaKnown RBP8.14□□□□□ -1.11
HDAC9-221ENST00000471887 GSNP06396 782 aa8.14□□□□□ -1.11
HDAC9-221ENST00000471887 EPHX1P07099 455 aa8.14□□□□□ -1.11
HDAC9-221ENST00000471887 ZNF445P59923 1031 aa8.14□□□□□ -1.11
HDAC9-221ENST00000471887 TEKQ02763 1124 aa8.14□□□□□ -1.11
HDAC9-221ENST00000471887 ANKS3Q6ZW76 656 aa8.14□□□□□ -1.11
HDAC9-221ENST00000471887 ADAT2Q7Z6V5 191 aaKnown RBP8.14□□□□□ -1.11
HDAC9-221ENST00000471887 BRF1Q92994 677 aa8.14□□□□□ -1.11
HDAC9-221ENST00000471887 KRTAP4-8Q9BYQ9 185 aa8.14□□□□□ -1.11
HDAC9-221ENST00000471887 FOXP3Q9BZS1 431 aa8.14□□□□□ -1.11
HDAC9-221ENST00000471887 KLHL25Q9H0H3 589 aa8.14□□□□□ -1.11
HDAC9-221ENST00000471887 WHRNQ9P202 907 aa8.14□□□□□ -1.11
HDAC9-221ENST00000471887 DNAJC25-GNG10A0A024R161 153 aa8.13□□□□□ -1.11
HDAC9-221ENST00000471887 A0A087WZG4 1122 aa8.13□□□□□ -1.11
HDAC9-221ENST00000471887 BIN1O00499 593 aa8.13□□□□□ -1.11
HDAC9-221ENST00000471887 PPM1BO75688 479 aa8.13□□□□□ -1.11
HDAC9-221ENST00000471887 SYPP08247 313 aa8.13□□□□□ -1.11
HDAC9-221ENST00000471887 BMP8BP34820 402 aa8.13□□□□□ -1.11
HDAC9-221ENST00000471887 GDNFP39905 211 aa8.13□□□□□ -1.11
HDAC9-221ENST00000471887 CTSKP43235 329 aa8.13□□□□□ -1.11
HDAC9-221ENST00000471887 SF3A1Q15459 793 aaKnown RBP8.13□□□□□ -1.11
HDAC9-221ENST00000471887 RALGPS1Q5JS13 557 aa8.13□□□□□ -1.11
HDAC9-221ENST00000471887 CWF19L1Q69YN2 538 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms