RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 CATIPQ7Z7H3 387 aa10.65□□□□□ -0.7
PTPRE-207ENST00000471218 METTL16Q86W50 562 aaKnown RBP10.65□□□□□ -0.7
PTPRE-207ENST00000471218 SPRYD3Q8NCJ5 442 aa10.65□□□□□ -0.7
PTPRE-207ENST00000471218 SH3TC2Q8TF17 1288 aa10.65□□□□□ -0.7
PTPRE-207ENST00000471218 CCDC17Q96LX7 622 aa10.65□□□□□ -0.7
PTPRE-207ENST00000471218 TCEANC2Q96MN5 208 aa10.65□□□□□ -0.7
PTPRE-207ENST00000471218 ZSCAN16Q9H4T2 348 aaPredicted RBP10.65□□□□□ -0.7
PTPRE-207ENST00000471218 PICK1Q9NRD5 415 aa10.65□□□□□ -0.7
PTPRE-207ENST00000471218 SYNPO2Q9UMS6 1093 aa10.65□□□□□ -0.7
PTPRE-207ENST00000471218 SLC45A1Q9Y2W3 748 aa10.65□□□□□ -0.7
PTPRE-207ENST00000471218 TNKSO95271 1327 aa10.64□□□□□ -0.71
PTPRE-207ENST00000471218 NAV1Q8NEY1 1877 aa10.64□□□□□ -0.71
PTPRE-207ENST00000471218 FOCADQ5VW36 1801 aa10.64□□□□□ -0.71
PTPRE-207ENST00000471218 H0YGN5 161 aa10.64□□□□□ -0.71
PTPRE-207ENST00000471218 RANBP6O60518 1105 aaKnown RBP10.64□□□□□ -0.71
PTPRE-207ENST00000471218 IFNAR1P17181 557 aa10.64□□□□□ -0.71
PTPRE-207ENST00000471218 GABPAQ06546 454 aa10.64□□□□□ -0.71
PTPRE-207ENST00000471218 COL9A3Q14050 684 aaPredicted RBP10.64□□□□□ -0.71
PTPRE-207ENST00000471218 IFIT1BQ5T764 474 aaKnown RBP10.64□□□□□ -0.71
PTPRE-207ENST00000471218 CDC42EP5Q6NZY7 148 aa10.64□□□□□ -0.71
PTPRE-207ENST00000471218 NFXL1Q6ZNB6 911 aa10.64□□□□□ -0.71
PTPRE-207ENST00000471218 ENAHQ8N8S7 591 aaPredicted RBP10.64□□□□□ -0.71
PTPRE-207ENST00000471218 NECAB1Q8N987 351 aa10.64□□□□□ -0.71
PTPRE-207ENST00000471218 FAM184AQ8NB25 1140 aa10.64□□□□□ -0.71
PTPRE-207ENST00000471218 RNF208Q9H0X6 261 aa10.64□□□□□ -0.71
PTPRE-207ENST00000471218 OSBPL5Q9H0X9 879 aaPredicted RBP10.64□□□□□ -0.71
PTPRE-207ENST00000471218 MKNK2Q9HBH9 465 aa10.64□□□□□ -0.71
PTPRE-207ENST00000471218 TOMM22Q9NS69 142 aa10.64□□□□□ -0.71
PTPRE-207ENST00000471218 USP40Q9NVE5 1235 aa10.64□□□□□ -0.71
PTPRE-207ENST00000471218 SERPINB13Q9UIV8 391 aa10.64□□□□□ -0.71
PTPRE-207ENST00000471218 BRPF3Q9ULD4 1205 aa10.64□□□□□ -0.71
PTPRE-207ENST00000471218 MYPNQ86TC9 1320 aa10.63□□□□□ -0.71
PTPRE-207ENST00000471218 PTPDC1A2A3K4 754 aa10.63□□□□□ -0.71
PTPRE-207ENST00000471218 TSPY2A6NKD2 308 aa10.63□□□□□ -0.71
PTPRE-207ENST00000471218 GOLGA8AA7E2F4 631 aa10.63□□□□□ -0.71
PTPRE-207ENST00000471218 BAG4O95429 457 aaKnown RBP10.63□□□□□ -0.71
PTPRE-207ENST00000471218 OSBPP22059 807 aa10.63□□□□□ -0.71
PTPRE-207ENST00000471218 KIF5BP33176 963 aa10.63□□□□□ -0.71
PTPRE-207ENST00000471218 GNAQP50148 359 aa10.63□□□□□ -0.71
PTPRE-207ENST00000471218 LARP1BQ659C4 914 aaKnown RBP10.63□□□□□ -0.71
PTPRE-207ENST00000471218 MIGA2Q7L4E1 593 aa10.63□□□□□ -0.71
PTPRE-207ENST00000471218 FOXP4Q8IVH2 680 aaPredicted RBP10.63□□□□□ -0.71
PTPRE-207ENST00000471218 MAPKAPK5Q8IW41 473 aa10.63□□□□□ -0.71
PTPRE-207ENST00000471218 TRIM22Q8IYM9 498 aa10.63□□□□□ -0.71
PTPRE-207ENST00000471218 ZNF654Q8IZM8 581 aa10.63□□□□□ -0.71
PTPRE-207ENST00000471218 ZNF444Q8N0Y2 327 aaPredicted RBP10.63□□□□□ -0.71
PTPRE-207ENST00000471218 TMEM87AQ8NBN3 555 aa10.63□□□□□ -0.71
PTPRE-207ENST00000471218 NEDD1Q8NHV4 660 aa10.63□□□□□ -0.71
PTPRE-207ENST00000471218 PXYLP1Q8TE99 480 aa10.63□□□□□ -0.71
PTPRE-207ENST00000471218 LZTS2Q9BRK4 669 aa10.63□□□□□ -0.71
PTPRE-207ENST00000471218 LRRC2Q9BYS8 371 aa10.63□□□□□ -0.71
PTPRE-207ENST00000471218 PI4KBQ9UBF8 816 aa10.63□□□□□ -0.71
PTPRE-207ENST00000471218 CPA4Q9UI42 421 aa10.63□□□□□ -0.71
PTPRE-207ENST00000471218 MTMR6Q9Y217 621 aa10.63□□□□□ -0.71
PTPRE-207ENST00000471218 ZDHHC9Q9Y397 364 aa10.63□□□□□ -0.71
PTPRE-207ENST00000471218 TRIOBPQ9H2D6 2365 aa10.62□□□□□ -0.71
PTPRE-207ENST00000471218 F13A1P00488 732 aa10.62□□□□□ -0.71
PTPRE-207ENST00000471218 CCL5P13501 91 aa10.62□□□□□ -0.71
PTPRE-207ENST00000471218 RASA1P20936 1047 aa10.62□□□□□ -0.71
PTPRE-207ENST00000471218 SMARCA1P28370 1054 aa10.62□□□□□ -0.71
PTPRE-207ENST00000471218 CACNB3P54284 484 aa10.62□□□□□ -0.71
PTPRE-207ENST00000471218 IRF5Q13568 498 aa10.62□□□□□ -0.71
PTPRE-207ENST00000471218 RTN1Q16799 776 aa10.62□□□□□ -0.71
PTPRE-207ENST00000471218 RRP12Q5JTH9 1297 aaKnown RBP10.62□□□□□ -0.71
PTPRE-207ENST00000471218 CDAN1Q8IWY9 1227 aa10.62□□□□□ -0.71
PTPRE-207ENST00000471218 RNF26Q9BY78 433 aaPredicted RBP10.62□□□□□ -0.71
PTPRE-207ENST00000471218 ARHGAP39Q9C0H5 1083 aa10.62□□□□□ -0.71
PTPRE-207ENST00000471218 FOXD4L1Q9NU39 408 aa10.62□□□□□ -0.71
PTPRE-207ENST00000471218 HERC5Q9UII4 1024 aaKnown RBP10.62□□□□□ -0.71
PTPRE-207ENST00000471218 PNMA3Q9UL41 463 aa10.62□□□□□ -0.71
PTPRE-207ENST00000471218 TACC3Q9Y6A5 838 aa10.62□□□□□ -0.71
PTPRE-207ENST00000471218 CTNND1O60716 968 aaKnown RBP10.61□□□□□ -0.71
PTPRE-207ENST00000471218 SGPL1O95470 568 aa10.61□□□□□ -0.71
PTPRE-207ENST00000471218 CTDNEP1O95476 244 aa10.61□□□□□ -0.71
PTPRE-207ENST00000471218 MYCP01106 439 aaPredicted RBP10.61□□□□□ -0.71
PTPRE-207ENST00000471218 TSPY3P0CV98 308 aa10.61□□□□□ -0.71
PTPRE-207ENST00000471218 TSPY8P0CW00 308 aa10.61□□□□□ -0.71
PTPRE-207ENST00000471218 INPP5BP32019 993 aa10.61□□□□□ -0.71
PTPRE-207ENST00000471218 CDK8P49336 464 aa10.61□□□□□ -0.71
PTPRE-207ENST00000471218 CAP1Q01518 475 aa10.61□□□□□ -0.71
PTPRE-207ENST00000471218 TROAPQ12815 778 aa10.61□□□□□ -0.71
PTPRE-207ENST00000471218 PABPC4Q13310 644 aaKnown RBP eCLIP10.61□□□□□ -0.71
PTPRE-207ENST00000471218 CHRDL2Q6WN34 429 aa10.61□□□□□ -0.71
PTPRE-207ENST00000471218 CHST3Q7LGC8 479 aa10.61□□□□□ -0.71
PTPRE-207ENST00000471218 BRAPQ7Z569 592 aa10.61□□□□□ -0.71
PTPRE-207ENST00000471218 SCYL3Q8IZE3 742 aa10.61□□□□□ -0.71
PTPRE-207ENST00000471218 FANCBQ8NB91 859 aa10.61□□□□□ -0.71
PTPRE-207ENST00000471218 SMCR8Q8TEV9 937 aaPredicted RBP10.61□□□□□ -0.71
PTPRE-207ENST00000471218 COA7Q96BR5 231 aa10.61□□□□□ -0.71
PTPRE-207ENST00000471218 GINM1Q9NU53 330 aa10.61□□□□□ -0.71
PTPRE-207ENST00000471218 ORC3Q9UBD5 711 aaPredicted RBP10.61□□□□□ -0.71
PTPRE-207ENST00000471218 ELP1O95163 1332 aa10.6□□□□□ -0.71
PTPRE-207ENST00000471218 CYP2D7A0A087X1C5 515 aa10.6□□□□□ -0.71
PTPRE-207ENST00000471218 A0A0G2JLL6 359 aaPredicted RBP10.6□□□□□ -0.71
PTPRE-207ENST00000471218 H3BQV1 296 aa10.6□□□□□ -0.71
PTPRE-207ENST00000471218 ADCY3O60266 1144 aa10.6□□□□□ -0.71
PTPRE-207ENST00000471218 EVI5O60447 810 aa10.6□□□□□ -0.71
PTPRE-207ENST00000471218 DEXIO95424 95 aa10.6□□□□□ -0.71
PTPRE-207ENST00000471218 MBD3O95983 291 aa10.6□□□□□ -0.71
PTPRE-207ENST00000471218 TFRCP02786 760 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms