RNA–Protein interactions for RNA: ENST00000470951.5

SRGAP3-204, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 2,334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-204ENST00000470951 SCARF1Q14162 830 aa12.73□□□□□ -0.37
SRGAP3-204ENST00000470951 PPP2R5AQ15172 486 aa12.73□□□□□ -0.37
SRGAP3-204ENST00000470951 GRAMD1CQ8IYS0 662 aa12.73□□□□□ -0.37
SRGAP3-204ENST00000470951 EHBP1Q8NDI1 1231 aa12.73□□□□□ -0.37
SRGAP3-204ENST00000470951 ACRBPQ8NEB7 543 aa12.73□□□□□ -0.37
SRGAP3-204ENST00000470951 COG1Q8WTW3 980 aa12.73□□□□□ -0.37
SRGAP3-204ENST00000470951 ATRIPQ8WXE1 791 aa12.73□□□□□ -0.37
SRGAP3-204ENST00000470951 FAM212AQ96EL1 285 aa12.73□□□□□ -0.37
SRGAP3-204ENST00000470951 HPCAL4Q9UM19 191 aa12.73□□□□□ -0.37
SRGAP3-204ENST00000470951 PPP1R3GB7ZBB8 358 aa12.73□□□□□ -0.37
SRGAP3-204ENST00000470951 ONECUT3O60422 494 aaPredicted RBP12.73□□□□□ -0.37
SRGAP3-204ENST00000470951 ERVK-24P63145 666 aa12.73□□□□□ -0.37
SRGAP3-204ENST00000470951 MTA1Q13330 715 aa12.73□□□□□ -0.37
SRGAP3-204ENST00000470951 TADA2BQ86TJ2 420 aa12.73□□□□□ -0.37
SRGAP3-204ENST00000470951 FERMT2Q96AC1 680 aa12.73□□□□□ -0.37
SRGAP3-204ENST00000470951 CSRNP2Q9H175 543 aa12.73□□□□□ -0.37
SRGAP3-204ENST00000470951 ZBTB12Q9Y330 459 aaPredicted RBP12.73□□□□□ -0.37
SRGAP3-204ENST00000470951 PCDHB6Q9Y5E3 794 aa12.73□□□□□ -0.37
SRGAP3-204ENST00000470951 MYH13Q9UKX3 1938 aa12.73□□□□□ -0.37
SRGAP3-204ENST00000470951 UBR2Q8IWV8 1755 aa12.72□□□□□ -0.37
SRGAP3-204ENST00000470951 MEGF6O75095 1541 aa12.72□□□□□ -0.37
SRGAP3-204ENST00000470951 A6NJR5 290 aa12.72□□□□□ -0.37
SRGAP3-204ENST00000470951 NBPF26B4DH59 902 aa12.72□□□□□ -0.37
SRGAP3-204ENST00000470951 MPHOSPH10O00566 681 aaKnown RBP12.72□□□□□ -0.37
SRGAP3-204ENST00000470951 PHACTR2O75167 634 aa12.72□□□□□ -0.37
SRGAP3-204ENST00000470951 CD44P16070 742 aaKnown RBP12.72□□□□□ -0.37
SRGAP3-204ENST00000470951 DPYDQ12882 1025 aa12.72□□□□□ -0.37
SRGAP3-204ENST00000470951 STIM1Q13586 685 aa12.72□□□□□ -0.37
SRGAP3-204ENST00000470951 MMS22LQ6ZRQ5 1243 aa12.72□□□□□ -0.37
SRGAP3-204ENST00000470951 NBPF15Q8N660 670 aa12.72□□□□□ -0.37
SRGAP3-204ENST00000470951 RUBCNQ92622 972 aa12.72□□□□□ -0.37
SRGAP3-204ENST00000470951 SMARCC1Q92922 1105 aaPredicted RBP12.72□□□□□ -0.37
SRGAP3-204ENST00000470951 PYM1Q9BRP8 204 aaKnown RBP12.72□□□□□ -0.37
SRGAP3-204ENST00000470951 KRT23Q9C075 422 aa12.72□□□□□ -0.37
SRGAP3-204ENST00000470951 CDHR2Q9BYE9 1310 aa12.72□□□□□ -0.37
SRGAP3-204ENST00000470951 IFIT3O14879 490 aaKnown RBP12.72□□□□□ -0.37
SRGAP3-204ENST00000470951 N4BP3O15049 544 aa12.72□□□□□ -0.37
SRGAP3-204ENST00000470951 PAPD7Q5XG87 772 aaKnown RBP12.72□□□□□ -0.37
SRGAP3-204ENST00000470951 ANKRD23Q86SG2 305 aa12.72□□□□□ -0.37
SRGAP3-204ENST00000470951 TMTC2Q8N394 836 aa12.72□□□□□ -0.37
SRGAP3-204ENST00000470951 PAGE5Q96GU1 130 aa12.72□□□□□ -0.37
SRGAP3-204ENST00000470951 NUP88Q99567 741 aaPredicted RBP12.72□□□□□ -0.37
SRGAP3-204ENST00000470951 SENP2Q9HC62 589 aa12.72□□□□□ -0.37
SRGAP3-204ENST00000470951 SEC31BQ9NQW1 1179 aa12.72□□□□□ -0.37
SRGAP3-204ENST00000470951 TRIM75PA6NK02 468 aa12.71□□□□□ -0.37
SRGAP3-204ENST00000470951 A6NNZ2 444 aa12.71□□□□□ -0.37
SRGAP3-204ENST00000470951 CABP4P57796 275 aa12.71□□□□□ -0.37
SRGAP3-204ENST00000470951 PPP2R5BQ15173 497 aa12.71□□□□□ -0.37
SRGAP3-204ENST00000470951 KRT31Q15323 416 aa12.71□□□□□ -0.37
SRGAP3-204ENST00000470951 RTN1Q16799 776 aa12.71□□□□□ -0.37
SRGAP3-204ENST00000470951 TUBB8Q3ZCM7 444 aa12.71□□□□□ -0.37
SRGAP3-204ENST00000470951 IQCEQ6IPM2 695 aa12.71□□□□□ -0.37
SRGAP3-204ENST00000470951 KLHL10Q6JEL2 608 aa12.71□□□□□ -0.37
SRGAP3-204ENST00000470951 CRACR2AQ9BSW2 395 aa12.71□□□□□ -0.37
SRGAP3-204ENST00000470951 PLA2G12BQ9BX93 195 aa12.71□□□□□ -0.37
SRGAP3-204ENST00000470951 RWDD2AQ9UIY3 292 aa12.71□□□□□ -0.37
SRGAP3-204ENST00000470951 DENND2AQ9ULE3 1009 aa12.71□□□□□ -0.37
SRGAP3-204ENST00000470951 SAR1BQ9Y6B6 198 aa12.71□□□□□ -0.37
SRGAP3-204ENST00000470951 EPN1Q9Y6I3 576 aaPredicted RBP12.71□□□□□ -0.37
SRGAP3-204ENST00000470951 ZC3H4Q9UPT8 1303 aaKnown RBP12.71□□□□□ -0.38
SRGAP3-204ENST00000470951 C21orf2O43822 256 aa12.71□□□□□ -0.38
SRGAP3-204ENST00000470951 NDUFA10O95299 355 aa12.71□□□□□ -0.38
SRGAP3-204ENST00000470951 AKAP17AQ02040 695 aaKnown RBP12.71□□□□□ -0.38
SRGAP3-204ENST00000470951 NCAPH2Q6IBW4 605 aa12.71□□□□□ -0.38
SRGAP3-204ENST00000470951 GBP6Q6ZN66 633 aa12.71□□□□□ -0.38
SRGAP3-204ENST00000470951 NLRP2Q9NX02 1062 aa12.71□□□□□ -0.38
SRGAP3-204ENST00000470951 MYH2Q9UKX2 1941 aa12.7□□□□□ -0.38
SRGAP3-204ENST00000470951 XBP1P17861 261 aa12.7□□□□□ -0.38
SRGAP3-204ENST00000470951 KRT9P35527 623 aa12.7□□□□□ -0.38
SRGAP3-204ENST00000470951 MCAMP43121 646 aa12.7□□□□□ -0.38
SRGAP3-204ENST00000470951 COPB1P53618 953 aaKnown RBP12.7□□□□□ -0.38
SRGAP3-204ENST00000470951 STX17P56962 302 aa12.7□□□□□ -0.38
SRGAP3-204ENST00000470951 ZC3H6P61129 1189 aaKnown RBP12.7□□□□□ -0.38
SRGAP3-204ENST00000470951 TTLL7Q6ZT98 887 aa12.7□□□□□ -0.38
SRGAP3-204ENST00000470951 CRACR2BQ8N4Y2 399 aaPredicted RBP12.7□□□□□ -0.38
SRGAP3-204ENST00000470951 ZNF513Q8N8E2 541 aaPredicted RBP12.7□□□□□ -0.38
SRGAP3-204ENST00000470951 FAM76AQ8TAV0 307 aa12.7□□□□□ -0.38
SRGAP3-204ENST00000470951 SLF1Q9BQI6 1058 aa12.7□□□□□ -0.38
SRGAP3-204ENST00000470951 ZSWIM5Q9P217 1185 aa12.7□□□□□ -0.38
SRGAP3-204ENST00000470951 KCNJ14Q9UNX9 436 aa12.7□□□□□ -0.38
SRGAP3-204ENST00000470951 ANO9A1A5B4 782 aa12.7□□□□□ -0.38
SRGAP3-204ENST00000470951 H0YHG0 523 aa12.7□□□□□ -0.38
SRGAP3-204ENST00000470951 ADAMTS2O95450 1211 aa12.7□□□□□ -0.38
SRGAP3-204ENST00000470951 KRT83P78385 493 aa12.7□□□□□ -0.38
SRGAP3-204ENST00000470951 SARNPP82979 210 aaKnown RBP12.7□□□□□ -0.38
SRGAP3-204ENST00000470951 E2F4Q16254 413 aa12.7□□□□□ -0.38
SRGAP3-204ENST00000470951 CCDC70Q6NSX1 233 aa12.7□□□□□ -0.38
SRGAP3-204ENST00000470951 USP49Q70CQ1 688 aa12.7□□□□□ -0.38
SRGAP3-204ENST00000470951 NKX2-3Q8TAU0 364 aa12.7□□□□□ -0.38
SRGAP3-204ENST00000470951 STRBPQ96SI9 672 aaKnown RBP12.7□□□□□ -0.38
SRGAP3-204ENST00000470951 MYL10Q9BUA6 226 aa12.7□□□□□ -0.38
SRGAP3-204ENST00000470951 CYP27B1O15528 508 aa12.69□□□□□ -0.38
SRGAP3-204ENST00000470951 COQ9O75208 318 aa12.69□□□□□ -0.38
SRGAP3-204ENST00000470951 TFRCP02786 760 aaKnown RBP12.69□□□□□ -0.38
SRGAP3-204ENST00000470951 GUCY1A2P33402 732 aa12.69□□□□□ -0.38
SRGAP3-204ENST00000470951 AFMP43652 599 aa12.69□□□□□ -0.38
SRGAP3-204ENST00000470951 TRIM28Q13263 835 aaKnown RBP12.69□□□□□ -0.38
SRGAP3-204ENST00000470951 OR8K1Q8NGG5 319 aa12.69□□□□□ -0.38
SRGAP3-204ENST00000470951 ISCA1Q9BUE6 129 aa12.69□□□□□ -0.38
SRGAP3-204ENST00000470951 RIC1Q4ADV7 1423 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms