RNA–Protein interactions for RNA: ENST00000470710.1

HDLBP-233, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-233	ENST00000470710	VPS37C	A5D8V6	355 aa	Predicted RBP	10.08	□□□□□ -0.8
HDLBP-233	ENST00000470710		H3BQV1	296 aa		10.08	□□□□□ -0.8
HDLBP-233	ENST00000470710	CYTH3	O43739	400 aa		10.08	□□□□□ -0.8
HDLBP-233	ENST00000470710	F13A1	P00488	732 aa		10.08	□□□□□ -0.8
HDLBP-233	ENST00000470710	GOLGA8H	P0CJ92	632 aa		10.08	□□□□□ -0.8
HDLBP-233	ENST00000470710	PTPRA	P18433	802 aa		10.08	□□□□□ -0.8
HDLBP-233	ENST00000470710	SLC1A4	P43007	532 aa		10.08	□□□□□ -0.8
HDLBP-233	ENST00000470710	PKN1	Q16512	942 aa		10.08	□□□□□ -0.8
HDLBP-233	ENST00000470710	CCDC96	Q2M329	555 aa		10.08	□□□□□ -0.8
HDLBP-233	ENST00000470710	IFFO2	Q5TF58	517 aa		10.08	□□□□□ -0.8
HDLBP-233	ENST00000470710	RASGRP2	Q7LDG7	609 aa		10.08	□□□□□ -0.8
HDLBP-233	ENST00000470710	CMTR1	Q8N1G2	835 aa	Known RBP	10.08	□□□□□ -0.8
HDLBP-233	ENST00000470710	CCDC82	Q8N4S0	544 aa		10.08	□□□□□ -0.8
HDLBP-233	ENST00000470710	RIOX1	Q9H6W3	641 aa		10.08	□□□□□ -0.8
HDLBP-233	ENST00000470710	VCPKMT	Q9H867	229 aa		10.08	□□□□□ -0.8
HDLBP-233	ENST00000470710	AS3MT	Q9HBK9	375 aa		10.08	□□□□□ -0.8
HDLBP-233	ENST00000470710	UNCX	A6NJT0	531 aa		10.07	□□□□□ -0.8
HDLBP-233	ENST00000470710	PLA2G6	O60733	806 aa		10.07	□□□□□ -0.8
HDLBP-233	ENST00000470710	POTEI	P0CG38	1075 aa		10.07	□□□□□ -0.8
HDLBP-233	ENST00000470710	POTEJ	P0CG39	1038 aa		10.07	□□□□□ -0.8
HDLBP-233	ENST00000470710	BMP3	P12645	472 aa		10.07	□□□□□ -0.8
HDLBP-233	ENST00000470710	SCG2	P13521	617 aa		10.07	□□□□□ -0.8
HDLBP-233	ENST00000470710	XBP1	P17861	261 aa		10.07	□□□□□ -0.8
HDLBP-233	ENST00000470710	ECE1	P42892	770 aa		10.07	□□□□□ -0.8
HDLBP-233	ENST00000470710	USP14	P54578	494 aa		10.07	□□□□□ -0.8
HDLBP-233	ENST00000470710	TRIM29	Q14134	588 aa		10.07	□□□□□ -0.8
HDLBP-233	ENST00000470710	PFKFB3	Q16875	520 aa	Predicted RBP	10.07	□□□□□ -0.8
HDLBP-233	ENST00000470710	BTNL9	Q6UXG8	535 aa		10.07	□□□□□ -0.8
HDLBP-233	ENST00000470710	DLK2	Q6UY11	383 aa		10.07	□□□□□ -0.8
HDLBP-233	ENST00000470710	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	10.07	□□□□□ -0.8
HDLBP-233	ENST00000470710	ARMC9	Q7Z3E5	817 aa		10.07	□□□□□ -0.8
HDLBP-233	ENST00000470710	LPAR1	Q92633	364 aa		10.07	□□□□□ -0.8
HDLBP-233	ENST00000470710	ZKSCAN4	Q969J2	545 aa	Predicted RBP	10.07	□□□□□ -0.8
HDLBP-233	ENST00000470710	MTMR8	Q96EF0	704 aa		10.07	□□□□□ -0.8
HDLBP-233	ENST00000470710	RRP36	Q96EU6	259 aa	Known RBP	10.07	□□□□□ -0.8
HDLBP-233	ENST00000470710	AIFM3	Q96NN9	605 aa		10.07	□□□□□ -0.8
HDLBP-233	ENST00000470710	GPCPD1	Q9NPB8	672 aa		10.07	□□□□□ -0.8
HDLBP-233	ENST00000470710	NMRK2	Q9NPI5	230 aa		10.07	□□□□□ -0.8
HDLBP-233	ENST00000470710	SH3GLB2	Q9NR46	395 aa		10.07	□□□□□ -0.8
HDLBP-233	ENST00000470710	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	10.07	□□□□□ -0.8
HDLBP-233	ENST00000470710	CLEC11A	Q9Y240	323 aa		10.07	□□□□□ -0.8
HDLBP-233	ENST00000470710	ATP6V1D	Q9Y5K8	247 aa		10.07	□□□□□ -0.8
HDLBP-233	ENST00000470710	CSAD	Q9Y600	493 aa		10.07	□□□□□ -0.8
HDLBP-233	ENST00000470710	SNCAIP	Q9Y6H5	919 aa		10.07	□□□□□ -0.8
HDLBP-233	ENST00000470710	FRMPD2	Q68DX3	1309 aa	Predicted RBP	10.07	□□□□□ -0.8
HDLBP-233	ENST00000470710	USP17L10	C9JJH3	530 aa		10.06	□□□□□ -0.8
HDLBP-233	ENST00000470710	UBE2Q2L	H0YL09	131 aa		10.06	□□□□□ -0.8
HDLBP-233	ENST00000470710	hCG_1984214	I3L0E3	225 aa		10.06	□□□□□ -0.8
HDLBP-233	ENST00000470710	REST	Q13127	1097 aa		10.06	□□□□□ -0.8
HDLBP-233	ENST00000470710	VGLL4	Q14135	290 aa		10.06	□□□□□ -0.8
HDLBP-233	ENST00000470710	KIAA1755	Q5JYT7	1200 aa		10.06	□□□□□ -0.8
HDLBP-233	ENST00000470710	MAP1S	Q66K74	1059 aa	Predicted RBP	10.06	□□□□□ -0.8
HDLBP-233	ENST00000470710	KRT40	Q6A162	431 aa		10.06	□□□□□ -0.8
HDLBP-233	ENST00000470710	TTBK2	Q6IQ55	1244 aa		10.06	□□□□□ -0.8
HDLBP-233	ENST00000470710	KCTD1	Q719H9	257 aa		10.06	□□□□□ -0.8
HDLBP-233	ENST00000470710	CCDC84	Q86UT8	332 aa	Predicted RBP	10.06	□□□□□ -0.8
HDLBP-233	ENST00000470710	ZNF713	Q8N859	430 aa	Predicted RBP	10.06	□□□□□ -0.8
HDLBP-233	ENST00000470710	ZNF280C	Q8ND82	737 aa		10.06	□□□□□ -0.8
HDLBP-233	ENST00000470710	GBP4	Q96PP9	640 aa		10.06	□□□□□ -0.8
HDLBP-233	ENST00000470710	FEZ1	Q99689	392 aa		10.06	□□□□□ -0.8
HDLBP-233	ENST00000470710	UBA5	Q9GZZ9	404 aa		10.06	□□□□□ -0.8
HDLBP-233	ENST00000470710	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	10.06	□□□□□ -0.8
HDLBP-233	ENST00000470710	JMJD4	Q9H9V9	463 aa		10.06	□□□□□ -0.8
HDLBP-233	ENST00000470710	FZD1	Q9UP38	647 aa		10.06	□□□□□ -0.8
HDLBP-233	ENST00000470710	hCG_1642624	A0A1W2PR95	340 aa		10.05	□□□□□ -0.8
HDLBP-233	ENST00000470710	C19orf81	C9J6K1	198 aa		10.05	□□□□□ -0.8
HDLBP-233	ENST00000470710	WDR46	O15213	610 aa	Known RBP	10.05	□□□□□ -0.8
HDLBP-233	ENST00000470710	RAD21	O60216	631 aa		10.05	□□□□□ -0.8
HDLBP-233	ENST00000470710	MMP1	P03956	469 aa		10.05	□□□□□ -0.8
HDLBP-233	ENST00000470710	FOSB	P53539	338 aa		10.05	□□□□□ -0.8
HDLBP-233	ENST00000470710	BACE1	P56817	501 aa		10.05	□□□□□ -0.8
HDLBP-233	ENST00000470710	FKBP1B	P68106	108 aa		10.05	□□□□□ -0.8
HDLBP-233	ENST00000470710	GUCY1B3	Q02153	619 aa		10.05	□□□□□ -0.8
HDLBP-233	ENST00000470710	KIF23	Q02241	960 aa	Predicted RBP	10.05	□□□□□ -0.8
HDLBP-233	ENST00000470710	SPP2	Q13103	211 aa		10.05	□□□□□ -0.8
HDLBP-233	ENST00000470710	PRKG1	Q13976	671 aa		10.05	□□□□□ -0.8
HDLBP-233	ENST00000470710	FAM83B	Q5T0W9	1011 aa		10.05	□□□□□ -0.8
HDLBP-233	ENST00000470710	LDLRAD1	Q5T700	205 aa		10.05	□□□□□ -0.8
HDLBP-233	ENST00000470710	SYDE2	Q5VT97	1194 aa		10.05	□□□□□ -0.8
HDLBP-233	ENST00000470710	FOXD4L5	Q5VV16	416 aa	Predicted RBP	10.05	□□□□□ -0.8
HDLBP-233	ENST00000470710	OTUD7B	Q6GQQ9	843 aa		10.05	□□□□□ -0.8
HDLBP-233	ENST00000470710	FAM160B2	Q86V87	743 aa		10.05	□□□□□ -0.8
HDLBP-233	ENST00000470710	ANKRD13A	Q8IZ07	590 aa		10.05	□□□□□ -0.8
HDLBP-233	ENST00000470710	ADGRF4	Q8IZF3	695 aa		10.05	□□□□□ -0.8
HDLBP-233	ENST00000470710	SPICE1	Q8N0Z3	855 aa		10.05	□□□□□ -0.8
HDLBP-233	ENST00000470710	RBM46	Q8TBY0	533 aa	Known RBP	10.05	□□□□□ -0.8
HDLBP-233	ENST00000470710	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	10.05	□□□□□ -0.8
HDLBP-233	ENST00000470710	C12orf42	Q96LP6	360 aa		10.05	□□□□□ -0.8
HDLBP-233	ENST00000470710	NUP88	Q99567	741 aa	Predicted RBP	10.05	□□□□□ -0.8
HDLBP-233	ENST00000470710	CPVL	Q9H3G5	476 aa		10.05	□□□□□ -0.8
HDLBP-233	ENST00000470710	BARHL2	Q9NY43	387 aa		10.05	□□□□□ -0.8
HDLBP-233	ENST00000470710	SEC63	Q9UGP8	760 aa	Known RBP	10.05	□□□□□ -0.8
HDLBP-233	ENST00000470710	FEM1B	Q9UK73	627 aa		10.05	□□□□□ -0.8
HDLBP-233	ENST00000470710	ZHX2	Q9Y6X8	837 aa		10.05	□□□□□ -0.8
HDLBP-233	ENST00000470710	PNMA6F	A0A0J9YX94	578 aa		10.04	□□□□□ -0.8
HDLBP-233	ENST00000470710	TMEM232	C9JQI7	657 aa		10.04	□□□□□ -0.8
HDLBP-233	ENST00000470710	STXBP3	O00186	592 aa		10.04	□□□□□ -0.8
HDLBP-233	ENST00000470710	TRAF5	O00463	557 aa		10.04	□□□□□ -0.8
HDLBP-233	ENST00000470710	ZBTB5	O15062	677 aa		10.04	□□□□□ -0.8
HDLBP-233	ENST00000470710	BAG4	O95429	457 aa	Known RBP	10.04	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms