RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 USHBP1Q8N6Y0 703 aa9.2□□□□□ -0.94
COL11A1-208ENST00000470170 DAGLBQ8NCG7 672 aa9.2□□□□□ -0.94
COL11A1-208ENST00000470170 BHLHE22Q8NFJ8 381 aaPredicted RBP9.2□□□□□ -0.94
COL11A1-208ENST00000470170 TCTN2Q96GX1 697 aa9.2□□□□□ -0.94
COL11A1-208ENST00000470170 SLC6A18Q96N87 628 aa9.2□□□□□ -0.94
COL11A1-208ENST00000470170 FOXP3Q9BZS1 431 aa9.2□□□□□ -0.94
COL11A1-208ENST00000470170 PRDM14Q9GZV8 571 aa9.2□□□□□ -0.94
COL11A1-208ENST00000470170 METTL5Q9NRN9 209 aaKnown RBP9.2□□□□□ -0.94
COL11A1-208ENST00000470170 MINPP1Q9UNW1 487 aa9.2□□□□□ -0.94
COL11A1-208ENST00000470170 FAM86C2PA6NEL3 165 aa9.19□□□□□ -0.94
COL11A1-208ENST00000470170 PRAMEF1O95521 474 aa9.19□□□□□ -0.94
COL11A1-208ENST00000470170 RECKO95980 971 aa9.19□□□□□ -0.94
COL11A1-208ENST00000470170 FBXO15Q8NCQ5 510 aaPredicted RBP9.19□□□□□ -0.94
COL11A1-208ENST00000470170 SLC9A7Q96T83 725 aa9.19□□□□□ -0.94
COL11A1-208ENST00000470170 EPB41L4BQ9H329 900 aa9.19□□□□□ -0.94
COL11A1-208ENST00000470170 DCP1AQ9NPI6 582 aaPredicted RBP9.19□□□□□ -0.94
COL11A1-208ENST00000470170 RPL10P27635 214 aaKnown RBP9.18□□□□□ -0.94
COL11A1-208ENST00000470170 DUSP4Q13115 394 aa9.18□□□□□ -0.94
COL11A1-208ENST00000470170 RNF111Q6ZNA4 994 aa9.18□□□□□ -0.94
COL11A1-208ENST00000470170 LILRA2Q8N149 483 aa9.18□□□□□ -0.94
COL11A1-208ENST00000470170 ZNF655Q8N720 491 aaPredicted RBP9.18□□□□□ -0.94
COL11A1-208ENST00000470170 LINC01599Q8WXQ3 324 aa9.18□□□□□ -0.94
COL11A1-208ENST00000470170 RNF34Q969K3 372 aa9.18□□□□□ -0.94
COL11A1-208ENST00000470170 PPP1R16BQ96T49 567 aa9.18□□□□□ -0.94
COL11A1-208ENST00000470170 G6PC3Q9BUM1 346 aa9.18□□□□□ -0.94
COL11A1-208ENST00000470170 MKRN2Q9H000 416 aaKnown RBP9.18□□□□□ -0.94
COL11A1-208ENST00000470170 TCFL5Q9UL49 500 aa9.18□□□□□ -0.94
COL11A1-208ENST00000470170 ZNRF3Q9ULT6 936 aa9.18□□□□□ -0.94
COL11A1-208ENST00000470170 ZNF281Q9Y2X9 895 aa9.18□□□□□ -0.94
COL11A1-208ENST00000470170 TSPAN15O95858 294 aa9.17□□□□□ -0.94
COL11A1-208ENST00000470170 RAP1GAPP47736 663 aa9.17□□□□□ -0.94
COL11A1-208ENST00000470170 RACK1P63244 317 aaKnown RBP9.17□□□□□ -0.94
COL11A1-208ENST00000470170 NR0B2Q15466 257 aa9.17□□□□□ -0.94
COL11A1-208ENST00000470170 WAPLQ7Z5K2 1190 aa9.17□□□□□ -0.94
COL11A1-208ENST00000470170 HOMEZQ8IX15 550 aa9.17□□□□□ -0.94
COL11A1-208ENST00000470170 ANKS4BQ8N8V4 417 aa9.17□□□□□ -0.94
COL11A1-208ENST00000470170 SIGLEC6O43699 453 aa9.16□□□□□ -0.94
COL11A1-208ENST00000470170 FKTNO75072 461 aa9.16□□□□□ -0.94
COL11A1-208ENST00000470170 KRT1P04264 644 aa9.16□□□□□ -0.94
COL11A1-208ENST00000470170 SYPP08247 313 aa9.16□□□□□ -0.94
COL11A1-208ENST00000470170 ACRP10323 421 aa9.16□□□□□ -0.94
COL11A1-208ENST00000470170 GALK1P51570 392 aa9.16□□□□□ -0.94
COL11A1-208ENST00000470170 PCBP3P57721 371 aaKnown RBP9.16□□□□□ -0.94
COL11A1-208ENST00000470170 CHRNEQ04844 493 aa9.16□□□□□ -0.94
COL11A1-208ENST00000470170 BBS9Q3SYG4 887 aa9.16□□□□□ -0.94
COL11A1-208ENST00000470170 SPPL2CQ8IUH8 684 aa9.16□□□□□ -0.94
COL11A1-208ENST00000470170 GPR160Q9UJ42 338 aa9.16□□□□□ -0.94
COL11A1-208ENST00000470170 ZMYM5Q9UJ78 669 aa9.16□□□□□ -0.94
COL11A1-208ENST00000470170 SSU72P8A0A1W2PR75 194 aa9.15□□□□□ -0.94
COL11A1-208ENST00000470170 TMEM82A0PJX8 343 aa9.15□□□□□ -0.94
COL11A1-208ENST00000470170 MEIS1O00470 390 aa9.15□□□□□ -0.94
COL11A1-208ENST00000470170 PSPNO60542 156 aa9.15□□□□□ -0.94
COL11A1-208ENST00000470170 USP2O75604 605 aaPredicted RBP9.15□□□□□ -0.94
COL11A1-208ENST00000470170 C1QTNF9P0C862 333 aa9.15□□□□□ -0.94
COL11A1-208ENST00000470170 ZPBP2Q6X784 338 aa9.15□□□□□ -0.94
COL11A1-208ENST00000470170 CILP2Q8IUL8 1156 aa9.15□□□□□ -0.94
COL11A1-208ENST00000470170 FERD3LQ96RJ6 166 aa9.15□□□□□ -0.94
COL11A1-208ENST00000470170 GFOD1Q9NXC2 390 aa9.15□□□□□ -0.94
COL11A1-208ENST00000470170 DDX41Q9UJV9 622 aaKnown RBP9.15□□□□□ -0.94
COL11A1-208ENST00000470170 ARID1BQ8NFD5 2236 aaPredicted RBP9.15□□□□□ -0.95
COL11A1-208ENST00000470170 EFEMP2O95967 443 aa9.14□□□□□ -0.95
COL11A1-208ENST00000470170 LINC00116Q8NCU8 138 aa9.14□□□□□ -0.95
COL11A1-208ENST00000470170 SLC6A17Q9H1V8 727 aa9.14□□□□□ -0.95
COL11A1-208ENST00000470170 CWC22Q9HCG8 908 aaKnown RBP9.14□□□□□ -0.95
COL11A1-208ENST00000470170 CHST7Q9NS84 486 aa9.14□□□□□ -0.95
COL11A1-208ENST00000470170 FBXL21Q9UKT6 434 aa9.14□□□□□ -0.95
COL11A1-208ENST00000470170 PPT2Q9UMR5 302 aa9.14□□□□□ -0.95
COL11A1-208ENST00000470170 PCDHB12Q9Y5F1 795 aa9.14□□□□□ -0.95
COL11A1-208ENST00000470170 KRTAP4-8A0A0G2JLE6 195 aa9.13□□□□□ -0.95
COL11A1-208ENST00000470170 NOTOA8MTQ0 251 aa9.13□□□□□ -0.95
COL11A1-208ENST00000470170 C9IYK1 514 aa9.13□□□□□ -0.95
COL11A1-208ENST00000470170 FBXW10Q5XX13 1052 aa9.13□□□□□ -0.95
COL11A1-208ENST00000470170 SHISA4Q96DD7 197 aa9.13□□□□□ -0.95
COL11A1-208ENST00000470170 INTS4Q96HW7 963 aaKnown RBP9.13□□□□□ -0.95
COL11A1-208ENST00000470170 MAP6Q96JE9 813 aa9.13□□□□□ -0.95
COL11A1-208ENST00000470170 SUCOQ9UBS9 1254 aaKnown RBP9.13□□□□□ -0.95
COL11A1-208ENST00000470170 YBX2Q9Y2T7 364 aaKnown RBP9.13□□□□□ -0.95
COL11A1-208ENST00000470170 NFIBO00712 420 aa9.12□□□□□ -0.95
COL11A1-208ENST00000470170 SCAMP3O14828 347 aaKnown RBP9.12□□□□□ -0.95
COL11A1-208ENST00000470170 IMPDH2P12268 514 aa9.12□□□□□ -0.95
COL11A1-208ENST00000470170 AUHQ13825 339 aaKnown RBP9.12□□□□□ -0.95
COL11A1-208ENST00000470170 TDRD10Q5VZ19 366 aaKnown RBP9.12□□□□□ -0.95
COL11A1-208ENST00000470170 SIRT2Q8IXJ6 389 aa9.12□□□□□ -0.95
COL11A1-208ENST00000470170 VAMP1P23763 118 aa9.11□□□□□ -0.95
COL11A1-208ENST00000470170 CTSKP43235 329 aa9.11□□□□□ -0.95
COL11A1-208ENST00000470170 INTS3Q68E01 1043 aaKnown RBP9.11□□□□□ -0.95
COL11A1-208ENST00000470170 RUFY4Q6ZNE9 571 aa9.11□□□□□ -0.95
COL11A1-208ENST00000470170 ZNF605Q86T29 641 aa9.11□□□□□ -0.95
COL11A1-208ENST00000470170 IRF2BP1Q8IU81 584 aa9.11□□□□□ -0.95
COL11A1-208ENST00000470170 HHIPL1Q96JK4 782 aa9.11□□□□□ -0.95
COL11A1-208ENST00000470170 ETV2O00321 342 aaPredicted RBP9.1□□□□□ -0.95
COL11A1-208ENST00000470170 TMEM253P0C7T8 217 aa9.1□□□□□ -0.95
COL11A1-208ENST00000470170 CFPP27918 469 aa9.1□□□□□ -0.95
COL11A1-208ENST00000470170 PDE6BP35913 854 aa9.1□□□□□ -0.95
COL11A1-208ENST00000470170 PAK2Q13177 524 aa9.1□□□□□ -0.95
COL11A1-208ENST00000470170 SNX17Q15036 470 aa9.1□□□□□ -0.95
COL11A1-208ENST00000470170 ZYXQ15942 572 aaKnown RBP9.1□□□□□ -0.95
COL11A1-208ENST00000470170 CRTC3Q6UUV7 619 aa9.1□□□□□ -0.95
COL11A1-208ENST00000470170 CEP128Q6ZU80 1094 aa9.1□□□□□ -0.95
COL11A1-208ENST00000470170 METTL16Q86W50 562 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms