RNA–Protein interactions for RNA: ENST00000468839.1

CRAMP1-206, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 3

Gene CRAMP1, Length 451 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-206ENST00000468839 DEFB129Q9H1M3 183 aa17.32■□□□□ 0.36
CRAMP1-206ENST00000468839 RTEL1Q9NZ71 1219 aa17.32■□□□□ 0.36
CRAMP1-206ENST00000468839 VPS54Q9P1Q0 977 aa17.32■□□□□ 0.36
CRAMP1-206ENST00000468839 ZBTB21Q9ULJ3 1066 aa17.32■□□□□ 0.36
CRAMP1-206ENST00000468839 KCNJ14Q9UNX9 436 aa17.32■□□□□ 0.36
CRAMP1-206ENST00000468839 MTMR7Q9Y216 660 aa17.32■□□□□ 0.36
CRAMP1-206ENST00000468839 PPP2R3BQ9Y5P8 575 aa17.32■□□□□ 0.36
CRAMP1-206ENST00000468839 PITPNM2Q9BZ72 1349 aa17.31■□□□□ 0.36
CRAMP1-206ENST00000468839 PHF20L1A8MW92 1017 aa17.31■□□□□ 0.36
CRAMP1-206ENST00000468839 GRIN3BO60391 1043 aa17.31■□□□□ 0.36
CRAMP1-206ENST00000468839 GADD45BO75293 160 aaPredicted RBP17.31■□□□□ 0.36
CRAMP1-206ENST00000468839 SLFN13Q68D06 897 aa17.31■□□□□ 0.36
CRAMP1-206ENST00000468839 MIGA2Q7L4E1 593 aa17.31■□□□□ 0.36
CRAMP1-206ENST00000468839 DIS3L2Q8IYB7 885 aaKnown RBP17.31■□□□□ 0.36
CRAMP1-206ENST00000468839 GPT2Q8TD30 523 aa17.31■□□□□ 0.36
CRAMP1-206ENST00000468839 USP28Q96RU2 1077 aa17.31■□□□□ 0.36
CRAMP1-206ENST00000468839 ADARB2Q9NS39 739 aaKnown RBP17.31■□□□□ 0.36
CRAMP1-206ENST00000468839 BTBD18B2RXH4 712 aa17.3■□□□□ 0.36
CRAMP1-206ENST00000468839 VEGFAP15692 232 aaPredicted RBP17.3■□□□□ 0.36
CRAMP1-206ENST00000468839 LMOD1P29536 600 aaPredicted RBP17.3■□□□□ 0.36
CRAMP1-206ENST00000468839 GNL2Q13823 731 aaKnown RBP17.3■□□□□ 0.36
CRAMP1-206ENST00000468839 GPR162Q16538 588 aa17.3■□□□□ 0.36
CRAMP1-206ENST00000468839 ANGEL2Q5VTE6 544 aaKnown RBP17.3■□□□□ 0.36
CRAMP1-206ENST00000468839 DPY19L2Q6NUT2 758 aa17.3■□□□□ 0.36
CRAMP1-206ENST00000468839 RASGRP2Q7LDG7 609 aa17.3■□□□□ 0.36
CRAMP1-206ENST00000468839 RRP36Q96EU6 259 aaKnown RBP17.3■□□□□ 0.36
CRAMP1-206ENST00000468839 GMCL1Q96IK5 515 aa17.3■□□□□ 0.36
CRAMP1-206ENST00000468839 ARHGEF10LQ9HCE6 1279 aa17.3■□□□□ 0.36
CRAMP1-206ENST00000468839 POLR3EQ9NVU0 708 aa17.3■□□□□ 0.36
CRAMP1-206ENST00000468839 PHIPQ8WWQ0 1821 aa17.3■□□□□ 0.36
CRAMP1-206ENST00000468839 FRMPD2Q68DX3 1309 aaPredicted RBP17.29■□□□□ 0.36
CRAMP1-206ENST00000468839 F5H6K3 240 aa17.29■□□□□ 0.36
CRAMP1-206ENST00000468839 hCG_1984214I3L0E3 225 aa17.29■□□□□ 0.36
CRAMP1-206ENST00000468839 YEATS4O95619 227 aa17.29■□□□□ 0.36
CRAMP1-206ENST00000468839 ASNSP08243 561 aa17.29■□□□□ 0.36
CRAMP1-206ENST00000468839 CALML3P27482 149 aa17.29■□□□□ 0.36
CRAMP1-206ENST00000468839 KRT2P35908 639 aa17.29■□□□□ 0.36
CRAMP1-206ENST00000468839 NASPP49321 788 aaPredicted RBP17.29■□□□□ 0.36
CRAMP1-206ENST00000468839 KLRC3Q07444 240 aa17.29■□□□□ 0.36
CRAMP1-206ENST00000468839 NPY5RQ15761 445 aa17.29■□□□□ 0.36
CRAMP1-206ENST00000468839 DCAF15Q66K64 600 aa17.29■□□□□ 0.36
CRAMP1-206ENST00000468839 NOSTRINQ8IVI9 506 aa17.29■□□□□ 0.36
CRAMP1-206ENST00000468839 ZNF713Q8N859 430 aaPredicted RBP17.29■□□□□ 0.36
CRAMP1-206ENST00000468839 MTMR8Q96EF0 704 aa17.29■□□□□ 0.36
CRAMP1-206ENST00000468839 L3MBTL3Q96JM7 780 aaPredicted RBP17.29■□□□□ 0.36
CRAMP1-206ENST00000468839 BRMS1Q9HCU9 246 aa17.29■□□□□ 0.36
CRAMP1-206ENST00000468839 GPCPD1Q9NPB8 672 aa17.29■□□□□ 0.36
CRAMP1-206ENST00000468839 TMX2Q9Y320 296 aa17.29■□□□□ 0.36
CRAMP1-206ENST00000468839 A0A1W2PRG0 241 aa17.28■□□□□ 0.36
CRAMP1-206ENST00000468839 CTNND1O60716 968 aaKnown RBP17.28■□□□□ 0.36
CRAMP1-206ENST00000468839 NLRP5P59047 1200 aa17.28■□□□□ 0.36
CRAMP1-206ENST00000468839 NBPF12Q5TAG4 269 aaPredicted RBP17.28■□□□□ 0.36
CRAMP1-206ENST00000468839 GALNT17Q6IS24 598 aa17.28■□□□□ 0.36
CRAMP1-206ENST00000468839 CCDC148Q8NFR7 591 aa17.28■□□□□ 0.36
CRAMP1-206ENST00000468839 UBA5Q9GZZ9 404 aa17.28■□□□□ 0.36
CRAMP1-206ENST00000468839 BARHL2Q9NY43 387 aa17.28■□□□□ 0.36
CRAMP1-206ENST00000468839 ZNF112Q9UJU3 913 aa17.28■□□□□ 0.36
CRAMP1-206ENST00000468839 STXBP3O00186 592 aa17.27■□□□□ 0.36
CRAMP1-206ENST00000468839 NDUFB10O96000 172 aa17.27■□□□□ 0.36
CRAMP1-206ENST00000468839 SLC1A4P43007 532 aa17.27■□□□□ 0.36
CRAMP1-206ENST00000468839 CCDC96Q2M329 555 aa17.27■□□□□ 0.36
CRAMP1-206ENST00000468839 ANO1Q5XXA6 986 aa17.27■□□□□ 0.36
CRAMP1-206ENST00000468839 WWC2Q6AWC2 1192 aa17.27■□□□□ 0.36
CRAMP1-206ENST00000468839 TTBK2Q6IQ55 1244 aa17.27■□□□□ 0.36
CRAMP1-206ENST00000468839 DAGLBQ8NCG7 672 aa17.27■□□□□ 0.36
CRAMP1-206ENST00000468839 LINC00301Q8NCQ3 95 aa17.27■□□□□ 0.36
CRAMP1-206ENST00000468839 OXER1Q8TDS5 423 aa17.27■□□□□ 0.36
CRAMP1-206ENST00000468839 PIBF1Q8WXW3 757 aa17.27■□□□□ 0.36
CRAMP1-206ENST00000468839 TNFRSF25Q93038 417 aa17.27■□□□□ 0.36
CRAMP1-206ENST00000468839 PIGSQ96S52 555 aa17.27■□□□□ 0.36
CRAMP1-206ENST00000468839 ZNF341Q9BYN7 854 aa17.27■□□□□ 0.36
CRAMP1-206ENST00000468839 CPVLQ9H3G5 476 aa17.27■□□□□ 0.36
CRAMP1-206ENST00000468839 JMJD4Q9H9V9 463 aa17.27■□□□□ 0.36
CRAMP1-206ENST00000468839 GGA3Q9NZ52 723 aa17.27■□□□□ 0.36
CRAMP1-206ENST00000468839 SEC63Q9UGP8 760 aaKnown RBP17.27■□□□□ 0.36
CRAMP1-206ENST00000468839 SCAF8Q9UPN6 1271 aaKnown RBP17.27■□□□□ 0.36
CRAMP1-206ENST00000468839 PNMA6FA0A0J9YX94 578 aa17.26■□□□□ 0.35
CRAMP1-206ENST00000468839 NR5A1Q13285 461 aa17.26■□□□□ 0.35
CRAMP1-206ENST00000468839 RILPL1Q5EBL4 403 aa17.26■□□□□ 0.35
CRAMP1-206ENST00000468839 BTNL9Q6UXG8 535 aa17.26■□□□□ 0.35
CRAMP1-206ENST00000468839 KCTD1Q719H9 257 aa17.26■□□□□ 0.35
CRAMP1-206ENST00000468839 ADGRF4Q8IZF3 695 aa17.26■□□□□ 0.35
CRAMP1-206ENST00000468839 CCDC12Q8WUD4 166 aaPredicted RBP17.26■□□□□ 0.35
CRAMP1-206ENST00000468839 PGBD1Q96JS3 809 aa17.26■□□□□ 0.35
CRAMP1-206ENST00000468839 SH2D4AQ9H788 454 aa17.26■□□□□ 0.35
CRAMP1-206ENST00000468839 VAT1LQ9HCJ6 419 aa17.26■□□□□ 0.35
CRAMP1-206ENST00000468839 CLIC4Q9Y696 253 aa17.26■□□□□ 0.35
CRAMP1-206ENST00000468839 WDR90Q96KV7 1748 aa17.26■□□□□ 0.35
CRAMP1-206ENST00000468839 ESYT2A0FGR8 921 aa17.25■□□□□ 0.35
CRAMP1-206ENST00000468839 BMP3P12645 472 aa17.25■□□□□ 0.35
CRAMP1-206ENST00000468839 CEBPZQ03701 1054 aaKnown RBP17.25■□□□□ 0.35
CRAMP1-206ENST00000468839 SLC39A14Q15043 492 aa17.25■□□□□ 0.35
CRAMP1-206ENST00000468839 STK38Q15208 465 aa17.25■□□□□ 0.35
CRAMP1-206ENST00000468839 TYW1BQ6NUM6 668 aa17.25■□□□□ 0.35
CRAMP1-206ENST00000468839 BLIDQ8IZY5 108 aa17.25■□□□□ 0.35
CRAMP1-206ENST00000468839 KCNG4Q8TDN1 519 aa17.25■□□□□ 0.35
CRAMP1-206ENST00000468839 ACER1Q8TDN7 264 aa17.25■□□□□ 0.35
CRAMP1-206ENST00000468839 GPKOWQ92917 476 aaPredicted RBP eCLIP17.25■□□□□ 0.35
CRAMP1-206ENST00000468839 FTOQ9C0B1 505 aaKnown RBP eCLIP17.25■□□□□ 0.35
CRAMP1-206ENST00000468839 ZMYND12Q9H0C1 365 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms