RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 TMEM260Q9NX78 707 aa7.42□□□□□ -1.22
GAPVD1-211ENST00000467707 PFDN2Q9UHV9 154 aa7.42□□□□□ -1.22
GAPVD1-211ENST00000467707 FHOD1Q9Y613 1164 aa7.42□□□□□ -1.22
GAPVD1-211ENST00000467707 GNAT3A8MTJ3 354 aa7.41□□□□□ -1.22
GAPVD1-211ENST00000467707 SHOXO15266 292 aa7.41□□□□□ -1.22
GAPVD1-211ENST00000467707 CDC45O75419 566 aa7.41□□□□□ -1.22
GAPVD1-211ENST00000467707 LEFTY1O75610 366 aa7.41□□□□□ -1.22
GAPVD1-211ENST00000467707 GDF11O95390 407 aa7.41□□□□□ -1.22
GAPVD1-211ENST00000467707 NFIAQ12857 509 aa7.41□□□□□ -1.22
GAPVD1-211ENST00000467707 PLA2G4EQ3MJ16 856 aa7.41□□□□□ -1.22
GAPVD1-211ENST00000467707 NOL9Q5SY16 702 aaKnown RBP7.41□□□□□ -1.22
GAPVD1-211ENST00000467707 EGFLAMQ63HQ2 1017 aa7.41□□□□□ -1.22
GAPVD1-211ENST00000467707 TMEM151AQ8N4L1 468 aa7.41□□□□□ -1.22
GAPVD1-211ENST00000467707 DTWD2Q8NBA8 298 aa7.41□□□□□ -1.22
GAPVD1-211ENST00000467707 SYTL5Q8TDW5 730 aaPredicted RBP7.41□□□□□ -1.22
GAPVD1-211ENST00000467707 TPSG1Q9NRR2 321 aa7.41□□□□□ -1.22
GAPVD1-211ENST00000467707 FAM86C1Q9NVL1 165 aa7.41□□□□□ -1.22
GAPVD1-211ENST00000467707 LRP2BPQ9P2M1 347 aa7.41□□□□□ -1.22
GAPVD1-211ENST00000467707 FBXL21Q9UKT6 434 aa7.41□□□□□ -1.22
GAPVD1-211ENST00000467707 DIS3Q9Y2L1 958 aaKnown RBP7.41□□□□□ -1.22
GAPVD1-211ENST00000467707 ZNF451Q9Y4E5 1061 aa7.41□□□□□ -1.22
GAPVD1-211ENST00000467707 DIAPH1O60610 1272 aaKnown RBP7.4□□□□□ -1.22
GAPVD1-211ENST00000467707 NCLP19338 710 aaKnown RBP7.4□□□□□ -1.22
GAPVD1-211ENST00000467707 ADMP35318 185 aa7.4□□□□□ -1.22
GAPVD1-211ENST00000467707 GSK3AP49840 483 aa7.4□□□□□ -1.22
GAPVD1-211ENST00000467707 HSP90AA2PQ14568 343 aaPredicted RBP7.4□□□□□ -1.22
GAPVD1-211ENST00000467707 PLEKHG4Q58EX7 1191 aa7.4□□□□□ -1.22
GAPVD1-211ENST00000467707 TMEM67Q5HYA8 995 aa7.4□□□□□ -1.22
GAPVD1-211ENST00000467707 MFSD4AQ8N468 514 aa7.4□□□□□ -1.22
GAPVD1-211ENST00000467707 ZBTB38Q8NAP3 1195 aaPredicted RBP7.4□□□□□ -1.22
GAPVD1-211ENST00000467707 BVESQ8NE79 360 aa7.4□□□□□ -1.22
GAPVD1-211ENST00000467707 SUGT1Q9Y2Z0 365 aa7.4□□□□□ -1.22
GAPVD1-211ENST00000467707 GRB10Q13322 594 aa7.39□□□□□ -1.23
GAPVD1-211ENST00000467707 GPAT2Q6NUI2 795 aa7.39□□□□□ -1.23
GAPVD1-211ENST00000467707 ZNF765Q7L2R6 523 aa7.39□□□□□ -1.23
GAPVD1-211ENST00000467707 ARHGEF39Q8N4T4 335 aa7.39□□□□□ -1.23
GAPVD1-211ENST00000467707 MFSD14AQ96MC6 490 aa7.39□□□□□ -1.23
GAPVD1-211ENST00000467707 HEXIM2Q96MH2 286 aaKnown RBP7.39□□□□□ -1.23
GAPVD1-211ENST00000467707 PRDM14Q9GZV8 571 aa7.39□□□□□ -1.23
GAPVD1-211ENST00000467707 ATG3Q9NT62 314 aa7.39□□□□□ -1.23
GAPVD1-211ENST00000467707 SF3B6Q9Y3B4 125 aaKnown RBP7.39□□□□□ -1.23
GAPVD1-211ENST00000467707 SIGLEC6O43699 453 aa7.38□□□□□ -1.23
GAPVD1-211ENST00000467707 ADCY3O60266 1144 aa7.38□□□□□ -1.23
GAPVD1-211ENST00000467707 IGLV1-40P01703 118 aa7.38□□□□□ -1.23
GAPVD1-211ENST00000467707 ZNF445P59923 1031 aa7.38□□□□□ -1.23
GAPVD1-211ENST00000467707 NMIQ13287 307 aaPredicted RBP7.38□□□□□ -1.23
GAPVD1-211ENST00000467707 C16orf86Q6ZW13 317 aa7.38□□□□□ -1.23
GAPVD1-211ENST00000467707 FBXL6Q8N531 539 aa7.38□□□□□ -1.23
GAPVD1-211ENST00000467707 ZNF513Q8N8E2 541 aaPredicted RBP7.38□□□□□ -1.23
GAPVD1-211ENST00000467707 LRRN4CLQ8ND94 238 aa7.38□□□□□ -1.23
GAPVD1-211ENST00000467707 FGD4Q96M96 766 aa7.38□□□□□ -1.23
GAPVD1-211ENST00000467707 IPO9Q96P70 1041 aaKnown RBP7.38□□□□□ -1.23
GAPVD1-211ENST00000467707 OSBPL1AQ9BXW6 950 aa7.38□□□□□ -1.23
GAPVD1-211ENST00000467707 GPR62Q9BZJ7 368 aa7.38□□□□□ -1.23
GAPVD1-211ENST00000467707 SLKQ9H2G2 1235 aaPredicted RBP7.38□□□□□ -1.23
GAPVD1-211ENST00000467707 TRIT1Q9H3H1 467 aaKnown RBP7.38□□□□□ -1.23
GAPVD1-211ENST00000467707 FANCLQ9NW38 375 aa7.38□□□□□ -1.23
GAPVD1-211ENST00000467707 APEX2Q9UBZ4 518 aa7.38□□□□□ -1.23
GAPVD1-211ENST00000467707 EMC9Q9Y3B6 208 aa7.38□□□□□ -1.23
GAPVD1-211ENST00000467707 PTCH2Q9Y6C5 1203 aa7.38□□□□□ -1.23
GAPVD1-211ENST00000467707 CAPN6Q9Y6Q1 641 aa7.38□□□□□ -1.23
GAPVD1-211ENST00000467707 TRAV20A0A0B4J274 112 aa7.37□□□□□ -1.23
GAPVD1-211ENST00000467707 A0A1W2PQU0 124 aa7.37□□□□□ -1.23
GAPVD1-211ENST00000467707 FAM170BA6NMN3 283 aa7.37□□□□□ -1.23
GAPVD1-211ENST00000467707 FAM155AB1AL88 458 aaPredicted RBP7.37□□□□□ -1.23
GAPVD1-211ENST00000467707 CBX7O95931 251 aa7.37□□□□□ -1.23
GAPVD1-211ENST00000467707 F13BP05160 661 aa7.37□□□□□ -1.23
GAPVD1-211ENST00000467707 ITGAVP06756 1048 aa7.37□□□□□ -1.23
GAPVD1-211ENST00000467707 TCEA2Q15560 299 aa7.37□□□□□ -1.23
GAPVD1-211ENST00000467707 ARHGAP27Q6ZUM4 889 aa7.37□□□□□ -1.23
GAPVD1-211ENST00000467707 ZNF227Q86WZ6 799 aa7.37□□□□□ -1.23
GAPVD1-211ENST00000467707 PPP1R14AQ96A00 147 aa7.37□□□□□ -1.23
GAPVD1-211ENST00000467707 Q96M66 194 aa7.37□□□□□ -1.23
GAPVD1-211ENST00000467707 CCDC140Q96MF4 163 aa7.37□□□□□ -1.23
GAPVD1-211ENST00000467707 AARSD1Q9BTE6 412 aaKnown RBP7.37□□□□□ -1.23
GAPVD1-211ENST00000467707 GPATCH2Q9NW75 528 aa7.37□□□□□ -1.23
GAPVD1-211ENST00000467707 CGGBP1Q9UFW8 167 aaPredicted RBP7.37□□□□□ -1.23
GAPVD1-211ENST00000467707 AKT3Q9Y243 479 aa7.37□□□□□ -1.23
GAPVD1-211ENST00000467707 ESYT3A0FGR9 886 aa7.36□□□□□ -1.23
GAPVD1-211ENST00000467707 FGFR1P11362 822 aa7.36□□□□□ -1.23
GAPVD1-211ENST00000467707 FSTP19883 344 aa7.36□□□□□ -1.23
GAPVD1-211ENST00000467707 CLCN7P51798 805 aa7.36□□□□□ -1.23
GAPVD1-211ENST00000467707 PPP2R2AP63151 447 aa7.36□□□□□ -1.23
GAPVD1-211ENST00000467707 TNK2Q07912 1038 aa7.36□□□□□ -1.23
GAPVD1-211ENST00000467707 SQSTM1Q13501 440 aa7.36□□□□□ -1.23
GAPVD1-211ENST00000467707 TRIM59Q8IWR1 403 aa7.36□□□□□ -1.23
GAPVD1-211ENST00000467707 FIBCD1Q8N539 461 aa7.36□□□□□ -1.23
GAPVD1-211ENST00000467707 ZNF655Q8N720 491 aaPredicted RBP7.36□□□□□ -1.23
GAPVD1-211ENST00000467707 DAGLBQ8NCG7 672 aa7.36□□□□□ -1.23
GAPVD1-211ENST00000467707 FEZ1Q99689 392 aa7.36□□□□□ -1.23
GAPVD1-211ENST00000467707 DSCC1Q9BVC3 393 aa7.36□□□□□ -1.23
GAPVD1-211ENST00000467707 CHST7Q9NS84 486 aa7.36□□□□□ -1.23
GAPVD1-211ENST00000467707 CNTNAP4Q9C0A0 1308 aa7.35□□□□□ -1.23
GAPVD1-211ENST00000467707 LRRN2O75325 713 aa7.35□□□□□ -1.23
GAPVD1-211ENST00000467707 ITGB2P05107 769 aa7.35□□□□□ -1.23
GAPVD1-211ENST00000467707 GSNP06396 782 aa7.35□□□□□ -1.23
GAPVD1-211ENST00000467707 FAM153BP0C7A2 387 aa7.35□□□□□ -1.23
GAPVD1-211ENST00000467707 OXCT1P55809 520 aa7.35□□□□□ -1.23
GAPVD1-211ENST00000467707 CLEC16AQ2KHT3 1053 aa7.35□□□□□ -1.23
GAPVD1-211ENST00000467707 THAP5Q7Z6K1 395 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms