RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 CCDC9Q9Y3X0 531 aaKnown RBP7.79□□□□□ -1.16
PRPF40A-205ENST00000467114 PCDHB14Q9Y5E9 798 aa7.79□□□□□ -1.16
PRPF40A-205ENST00000467114 TLR3O15455 904 aaKnown RBP7.78□□□□□ -1.16
PRPF40A-205ENST00000467114 ZNF16P17020 682 aaPredicted RBP7.78□□□□□ -1.16
PRPF40A-205ENST00000467114 EIF4A3P38919 411 aaKnown RBP7.78□□□□□ -1.16
PRPF40A-205ENST00000467114 ARSHQ5FYA8 562 aa7.78□□□□□ -1.16
PRPF40A-205ENST00000467114 CIAPIN1Q6FI81 312 aa7.78□□□□□ -1.16
PRPF40A-205ENST00000467114 RNF111Q6ZNA4 994 aa7.78□□□□□ -1.16
PRPF40A-205ENST00000467114 USHBP1Q8N6Y0 703 aa7.78□□□□□ -1.16
PRPF40A-205ENST00000467114 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.78□□□□□ -1.16
PRPF40A-205ENST00000467114 ASCC2Q9H1I8 757 aaPredicted RBP7.78□□□□□ -1.16
PRPF40A-205ENST00000467114 ZNF552Q9H707 407 aaPredicted RBP7.78□□□□□ -1.16
PRPF40A-205ENST00000467114 BRMS1Q9HCU9 246 aa7.78□□□□□ -1.16
PRPF40A-205ENST00000467114 GMIPQ9P107 970 aa7.78□□□□□ -1.16
PRPF40A-205ENST00000467114 SUPT16HQ9Y5B9 1047 aaKnown RBP7.78□□□□□ -1.16
PRPF40A-205ENST00000467114 MYOCOSA0A1B0GUC4 107 aa7.77□□□□□ -1.17
PRPF40A-205ENST00000467114 RAG1P15918 1043 aa7.77□□□□□ -1.17
PRPF40A-205ENST00000467114 LINC00310P59036 64 aa7.77□□□□□ -1.17
PRPF40A-205ENST00000467114 CDCP2Q5VXM1 449 aa7.77□□□□□ -1.17
PRPF40A-205ENST00000467114 DAGLBQ8NCG7 672 aa7.77□□□□□ -1.17
PRPF40A-205ENST00000467114 GPR160Q9UJ42 338 aa7.77□□□□□ -1.17
PRPF40A-205ENST00000467114 NOTOA8MTQ0 251 aa7.76□□□□□ -1.17
PRPF40A-205ENST00000467114 PSPNO60542 156 aa7.76□□□□□ -1.17
PRPF40A-205ENST00000467114 SEMA7AO75326 666 aa7.76□□□□□ -1.17
PRPF40A-205ENST00000467114 CHMP4BP1P59074 171 aa7.76□□□□□ -1.17
PRPF40A-205ENST00000467114 NBPF9Q3BBW0 867 aa7.76□□□□□ -1.17
PRPF40A-205ENST00000467114 NBPF12Q5TAG4 269 aaPredicted RBP7.76□□□□□ -1.17
PRPF40A-205ENST00000467114 ZNF655Q8N720 491 aaPredicted RBP7.76□□□□□ -1.17
PRPF40A-205ENST00000467114 EHMT1Q9H9B1 1298 aa7.76□□□□□ -1.17
PRPF40A-205ENST00000467114 RAPGEFL1Q9UHV5 662 aa7.76□□□□□ -1.17
PRPF40A-205ENST00000467114 CRKP46108 304 aa7.75□□□□□ -1.17
PRPF40A-205ENST00000467114 DLG4P78352 724 aa7.75□□□□□ -1.17
PRPF40A-205ENST00000467114 MRPL58Q14197 206 aaKnown RBP7.75□□□□□ -1.17
PRPF40A-205ENST00000467114 LDLRAD1Q5T700 205 aa7.75□□□□□ -1.17
PRPF40A-205ENST00000467114 TTLL10Q6ZVT0 673 aa7.75□□□□□ -1.17
PRPF40A-205ENST00000467114 ZNF605Q86T29 641 aa7.75□□□□□ -1.17
PRPF40A-205ENST00000467114 ZNF296Q8WUU4 475 aaPredicted RBP7.75□□□□□ -1.17
PRPF40A-205ENST00000467114 TCTN2Q96GX1 697 aa7.75□□□□□ -1.17
PRPF40A-205ENST00000467114 BCL2L13Q9BXK5 485 aa7.75□□□□□ -1.17
PRPF40A-205ENST00000467114 CNNM2Q9H8M5 875 aa7.75□□□□□ -1.17
PRPF40A-205ENST00000467114 TEX51A0A1B0GUA7 166 aa7.74□□□□□ -1.17
PRPF40A-205ENST00000467114 RPL10P27635 214 aaKnown RBP7.74□□□□□ -1.17
PRPF40A-205ENST00000467114 KIR2DL1P43626 348 aaPredicted RBP7.74□□□□□ -1.17
PRPF40A-205ENST00000467114 KIR2DL2P43627 348 aaPredicted RBP7.74□□□□□ -1.17
PRPF40A-205ENST00000467114 RAD51AP2Q09MP3 1159 aa7.74□□□□□ -1.17
PRPF40A-205ENST00000467114 OVOS1Q6IE37 1185 aa7.74□□□□□ -1.17
PRPF40A-205ENST00000467114 NLRX1Q86UT6 975 aa7.74□□□□□ -1.17
PRPF40A-205ENST00000467114 LINC00116Q8NCU8 138 aa7.74□□□□□ -1.17
PRPF40A-205ENST00000467114 GIPC2Q8TF65 315 aa7.74□□□□□ -1.17
PRPF40A-205ENST00000467114 FOXP3Q9BZS1 431 aa7.74□□□□□ -1.17
PRPF40A-205ENST00000467114 TMEM82A0PJX8 343 aa7.73□□□□□ -1.17
PRPF40A-205ENST00000467114 NUAK1O60285 661 aa7.73□□□□□ -1.17
PRPF40A-205ENST00000467114 EFEMP2O95967 443 aa7.73□□□□□ -1.17
PRPF40A-205ENST00000467114 PDE6BP35913 854 aa7.73□□□□□ -1.17
PRPF40A-205ENST00000467114 CCNFP41002 786 aa7.73□□□□□ -1.17
PRPF40A-205ENST00000467114 PCBP3P57721 371 aaKnown RBP7.73□□□□□ -1.17
PRPF40A-205ENST00000467114 TMC3Q7Z5M5 1100 aa7.73□□□□□ -1.17
PRPF40A-205ENST00000467114 REXO1Q8N1G1 1221 aaKnown RBP7.73□□□□□ -1.17
PRPF40A-205ENST00000467114 ATG4CQ96DT6 458 aa7.73□□□□□ -1.17
PRPF40A-205ENST00000467114 MAP6Q96JE9 813 aa7.73□□□□□ -1.17
PRPF40A-205ENST00000467114 GCM1Q9NP62 436 aa7.73□□□□□ -1.17
PRPF40A-205ENST00000467114 ADAMTS1Q9UHI8 967 aa7.73□□□□□ -1.17
PRPF40A-205ENST00000467114 TCFL5Q9UL49 500 aa7.73□□□□□ -1.17
PRPF40A-205ENST00000467114 UNCXA6NJT0 531 aa7.72□□□□□ -1.17
PRPF40A-205ENST00000467114 NRDCO43847 1150 aa7.72□□□□□ -1.17
PRPF40A-205ENST00000467114 POLR2BP30876 1174 aaKnown RBP7.72□□□□□ -1.17
PRPF40A-205ENST00000467114 SNW1Q13573 536 aaKnown RBP7.72□□□□□ -1.17
PRPF40A-205ENST00000467114 LILRA6Q6PI73 481 aa7.72□□□□□ -1.17
PRPF40A-205ENST00000467114 HS2ST1Q7LGA3 356 aa7.72□□□□□ -1.17
PRPF40A-205ENST00000467114 WAPLQ7Z5K2 1190 aa7.72□□□□□ -1.17
PRPF40A-205ENST00000467114 ZMYM5Q9UJ78 669 aa7.72□□□□□ -1.17
PRPF40A-205ENST00000467114 USP2O75604 605 aaPredicted RBP7.71□□□□□ -1.18
PRPF40A-205ENST00000467114 GALK1P51570 392 aa7.71□□□□□ -1.18
PRPF40A-205ENST00000467114 BBS9Q3SYG4 887 aa7.71□□□□□ -1.18
PRPF40A-205ENST00000467114 NLRC3Q7RTR2 1065 aa7.71□□□□□ -1.18
PRPF40A-205ENST00000467114 CRTAC1Q9NQ79 661 aa7.71□□□□□ -1.18
PRPF40A-205ENST00000467114 GGT7Q9UJ14 662 aa7.71□□□□□ -1.18
PRPF40A-205ENST00000467114 OR14I1A6ND48 311 aa7.7□□□□□ -1.18
PRPF40A-205ENST00000467114 HRKO00198 91 aa7.7□□□□□ -1.18
PRPF40A-205ENST00000467114 SIGLEC6O43699 453 aa7.7□□□□□ -1.18
PRPF40A-205ENST00000467114 PRAMEF1O95521 474 aa7.7□□□□□ -1.18
PRPF40A-205ENST00000467114 VAMP1P23763 118 aa7.7□□□□□ -1.18
PRPF40A-205ENST00000467114 CLCQ05315 142 aa7.7□□□□□ -1.18
PRPF40A-205ENST00000467114 TMEM132EQ6IEE7 984 aa7.7□□□□□ -1.18
PRPF40A-205ENST00000467114 HHIPL1Q96JK4 782 aa7.7□□□□□ -1.18
PRPF40A-205ENST00000467114 PRDM14Q9GZV8 571 aa7.7□□□□□ -1.18
PRPF40A-205ENST00000467114 IRF2BPLQ9H1B7 796 aa7.7□□□□□ -1.18
PRPF40A-205ENST00000467114 UBP1Q9NZI7 540 aa7.7□□□□□ -1.18
PRPF40A-205ENST00000467114 KIAA1522Q9P206 1035 aaPredicted RBP7.7□□□□□ -1.18
PRPF40A-205ENST00000467114 CLEC3AO75596 197 aa7.69□□□□□ -1.18
PRPF40A-205ENST00000467114 LRRFIP1Q32MZ4 808 aaKnown RBP7.69□□□□□ -1.18
PRPF40A-205ENST00000467114 SEZ6Q53EL9 994 aa7.69□□□□□ -1.18
PRPF40A-205ENST00000467114 ZNF326Q5BKZ1 582 aaKnown RBP7.69□□□□□ -1.18
PRPF40A-205ENST00000467114 CEP128Q6ZU80 1094 aa7.69□□□□□ -1.18
PRPF40A-205ENST00000467114 SSU72P8A0A1W2PR75 194 aa7.68□□□□□ -1.18
PRPF40A-205ENST00000467114 MEIS3P2A8K0S8 358 aa7.68□□□□□ -1.18
PRPF40A-205ENST00000467114 TNFRSF10CO14798 259 aa7.68□□□□□ -1.18
PRPF40A-205ENST00000467114 SYPP08247 313 aa7.68□□□□□ -1.18
PRPF40A-205ENST00000467114 INHBBP09529 407 aa7.68□□□□□ -1.18
PRPF40A-205ENST00000467114 NME1P15531 152 aaKnown RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms