RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 SYT10Q6XYQ8 523 aa9.63□□□□□ -0.87
HPS4-209ENST00000466781 ZBTB8OSQ8IWT0 167 aa9.63□□□□□ -0.87
HPS4-209ENST00000466781 CACNA2D3Q8IZS8 1091 aa9.63□□□□□ -0.87
HPS4-209ENST00000466781 ZMYM4Q5VZL5 1548 aa9.63□□□□□ -0.87
HPS4-209ENST00000466781 ERBB4Q15303 1308 aa9.63□□□□□ -0.87
HPS4-209ENST00000466781 RPS6KB1P23443 525 aa9.63□□□□□ -0.87
HPS4-209ENST00000466781 FAM102BQ5T8I3 360 aa9.63□□□□□ -0.87
HPS4-209ENST00000466781 HDXQ7Z353 690 aa9.63□□□□□ -0.87
HPS4-209ENST00000466781 MIER3Q7Z3K6 550 aa9.63□□□□□ -0.87
HPS4-209ENST00000466781 SYCE1Q8N0S2 351 aa9.63□□□□□ -0.87
HPS4-209ENST00000466781 IGSF22Q8N9C0 903 aa9.63□□□□□ -0.87
HPS4-209ENST00000466781 GJD4Q96KN9 370 aaPredicted RBP9.63□□□□□ -0.87
HPS4-209ENST00000466781 LRWD1Q9UFC0 647 aa9.63□□□□□ -0.87
HPS4-209ENST00000466781 V9GY48 417 aaPredicted RBP9.63□□□□□ -0.87
HPS4-209ENST00000466781 OVOS2A0A0G2JMS6 1433 aa9.63□□□□□ -0.87
HPS4-209ENST00000466781 OVOS2A0A0J9YW53 1432 aa9.63□□□□□ -0.87
HPS4-209ENST00000466781 OVOS2Q6IE36 1432 aa9.63□□□□□ -0.87
HPS4-209ENST00000466781 GIGYF1O75420 1035 aaPredicted RBP9.63□□□□□ -0.87
HPS4-209ENST00000466781 TUBBP07437 444 aa9.63□□□□□ -0.87
HPS4-209ENST00000466781 ITKQ08881 620 aa9.63□□□□□ -0.87
HPS4-209ENST00000466781 HHATQ5VTY9 493 aa9.63□□□□□ -0.87
HPS4-209ENST00000466781 NOP9Q86U38 636 aaKnown RBP9.63□□□□□ -0.87
HPS4-209ENST00000466781 TGFBRAP1Q8WUH2 860 aa9.63□□□□□ -0.87
HPS4-209ENST00000466781 MAIP1Q8WWC4 291 aa9.63□□□□□ -0.87
HPS4-209ENST00000466781 FAM114A2Q9NRY5 505 aa9.63□□□□□ -0.87
HPS4-209ENST00000466781 TTF2Q9UNY4 1162 aaKnown RBP9.63□□□□□ -0.87
HPS4-209ENST00000466781 PALLDQ8WX93 1383 aa9.63□□□□□ -0.87
HPS4-209ENST00000466781 GBP1P32455 592 aa9.63□□□□□ -0.87
HPS4-209ENST00000466781 IL6STP40189 918 aaPredicted RBP9.63□□□□□ -0.87
HPS4-209ENST00000466781 ZNF131P52739 623 aa9.63□□□□□ -0.87
HPS4-209ENST00000466781 NAPGQ99747 312 aaPredicted RBP9.63□□□□□ -0.87
HPS4-209ENST00000466781 VCXQ9H320 206 aa9.63□□□□□ -0.87
HPS4-209ENST00000466781 FEZ2Q9UHY8 353 aaPredicted RBP9.63□□□□□ -0.87
HPS4-209ENST00000466781 A0A1B0GVL5 298 aa9.63□□□□□ -0.87
HPS4-209ENST00000466781 KIF3CO14782 793 aa9.63□□□□□ -0.87
HPS4-209ENST00000466781 SLC9C1Q4G0N8 1177 aa9.63□□□□□ -0.87
HPS4-209ENST00000466781 TTLL7Q6ZT98 887 aa9.63□□□□□ -0.87
HPS4-209ENST00000466781 MAPKAPK5Q8IW41 473 aa9.63□□□□□ -0.87
HPS4-209ENST00000466781 PLEKHM2Q8IWE5 1019 aa9.63□□□□□ -0.87
HPS4-209ENST00000466781 DBNDD2Q9BQY9 259 aa9.63□□□□□ -0.87
HPS4-209ENST00000466781 ANKFY1Q9P2R3 1169 aa9.63□□□□□ -0.87
HPS4-209ENST00000466781 CAPN9O14815 690 aa9.62□□□□□ -0.87
HPS4-209ENST00000466781 TNNC2P02585 160 aa9.62□□□□□ -0.87
HPS4-209ENST00000466781 HPDP32754 393 aaPredicted RBP9.62□□□□□ -0.87
HPS4-209ENST00000466781 DCAF15Q66K64 600 aa9.62□□□□□ -0.87
HPS4-209ENST00000466781 TMC4Q7Z404 712 aa9.62□□□□□ -0.87
HPS4-209ENST00000466781 TRIM50Q86XT4 487 aa9.62□□□□□ -0.87
HPS4-209ENST00000466781 MYO1AQ9UBC5 1043 aa9.62□□□□□ -0.87
HPS4-209ENST00000466781 ABCA6Q8N139 1617 aa9.62□□□□□ -0.87
HPS4-209ENST00000466781 PRR36Q9H6K5 1346 aa9.62□□□□□ -0.87
HPS4-209ENST00000466781 DIP2BQ9P265 1576 aa9.62□□□□□ -0.87
HPS4-209ENST00000466781 ESYT2A0FGR8 921 aa9.62□□□□□ -0.87
HPS4-209ENST00000466781 PFDN6O15212 129 aa9.62□□□□□ -0.87
HPS4-209ENST00000466781 RNASE9P60153 205 aaKnown RBP9.62□□□□□ -0.87
HPS4-209ENST00000466781 PPP2R3AQ06190 1150 aa9.62□□□□□ -0.87
HPS4-209ENST00000466781 NAA25Q14CX7 972 aa9.62□□□□□ -0.87
HPS4-209ENST00000466781 HERC4Q5GLZ8 1057 aaPredicted RBP9.62□□□□□ -0.87
HPS4-209ENST00000466781 CABP7Q86V35 215 aa9.62□□□□□ -0.87
HPS4-209ENST00000466781 IL17REQ8NFR9 667 aa9.62□□□□□ -0.87
HPS4-209ENST00000466781 ZBTB40Q9NUA8 1239 aa9.62□□□□□ -0.87
HPS4-209ENST00000466781 RTEL1Q9NZ71 1219 aa9.62□□□□□ -0.87
HPS4-209ENST00000466781 KDM3AQ9Y4C1 1321 aa9.62□□□□□ -0.87
HPS4-209ENST00000466781 TCP10L2B9ZVM9 353 aa9.62□□□□□ -0.87
HPS4-209ENST00000466781 PER1O15534 1290 aaPredicted RBP9.62□□□□□ -0.87
HPS4-209ENST00000466781 DYMQ7RTS9 669 aa9.62□□□□□ -0.87
HPS4-209ENST00000466781 CHURC1Q8WUH1 139 aa9.62□□□□□ -0.87
HPS4-209ENST00000466781 SECISBP2LQ93073 1101 aaKnown RBP9.62□□□□□ -0.87
HPS4-209ENST00000466781 QRICH2Q9H0J4 1663 aa9.62□□□□□ -0.87
HPS4-209ENST00000466781 TESPA1A2RU30 521 aaPredicted RBP9.62□□□□□ -0.87
HPS4-209ENST00000466781 STAM2O75886 525 aa9.62□□□□□ -0.87
HPS4-209ENST00000466781 GTF2A1P52655 376 aaPredicted RBP9.62□□□□□ -0.87
HPS4-209ENST00000466781 IFRD2Q12894 506 aaPredicted RBP9.62□□□□□ -0.87
HPS4-209ENST00000466781 OTUD7BQ6GQQ9 843 aa9.62□□□□□ -0.87
HPS4-209ENST00000466781 APPBP2Q92624 585 aa9.62□□□□□ -0.87
HPS4-209ENST00000466781 TRIM56Q9BRZ2 755 aaKnown RBP9.62□□□□□ -0.87
HPS4-209ENST00000466781 ZNF277Q9NRM2 450 aaPredicted RBP9.62□□□□□ -0.87
HPS4-209ENST00000466781 LAMC1P11047 1609 aa9.62□□□□□ -0.87
HPS4-209ENST00000466781 TULP4Q9NRJ4 1543 aa9.62□□□□□ -0.87
HPS4-209ENST00000466781 ZBTB7BO15156 539 aaPredicted RBP9.62□□□□□ -0.87
HPS4-209ENST00000466781 CCDC93Q567U6 631 aa9.62□□□□□ -0.87
HPS4-209ENST00000466781 TPH2Q8IWU9 490 aa9.62□□□□□ -0.87
HPS4-209ENST00000466781 RSAD2Q8WXG1 361 aa9.62□□□□□ -0.87
HPS4-209ENST00000466781 ATP2A3Q93084 1043 aa9.62□□□□□ -0.87
HPS4-209ENST00000466781 ADPGKQ9BRR6 497 aa9.62□□□□□ -0.87
HPS4-209ENST00000466781 DCTPP1Q9H773 170 aa9.62□□□□□ -0.87
HPS4-209ENST00000466781 PRKAG2Q9UGJ0 569 aa9.62□□□□□ -0.87
HPS4-209ENST00000466781 IBTKQ9P2D0 1353 aaPredicted RBP9.61□□□□□ -0.87
HPS4-209ENST00000466781 GAS7O60861 476 aa9.61□□□□□ -0.87
HPS4-209ENST00000466781 DTNBO60941 627 aa9.61□□□□□ -0.87
HPS4-209ENST00000466781 PCCAP05165 728 aaPredicted RBP9.61□□□□□ -0.87
HPS4-209ENST00000466781 ANO1Q5XXA6 986 aa9.61□□□□□ -0.87
HPS4-209ENST00000466781 C4orf50Q6ZRC1 276 aa9.61□□□□□ -0.87
HPS4-209ENST00000466781 CROCCP2Q86T23 111 aa9.61□□□□□ -0.87
HPS4-209ENST00000466781 IFT20Q8IY31 132 aa9.61□□□□□ -0.87
HPS4-209ENST00000466781 RSRC1Q96IZ7 334 aaKnown RBP9.61□□□□□ -0.87
HPS4-209ENST00000466781 GPAA1O43292 621 aa9.61□□□□□ -0.87
HPS4-209ENST00000466781 CUTAO60888 179 aa9.61□□□□□ -0.87
HPS4-209ENST00000466781 NELFCDQ8IXH7 590 aa9.61□□□□□ -0.87
HPS4-209ENST00000466781 PLCB1Q9NQ66 1216 aa9.61□□□□□ -0.87
HPS4-209ENST00000466781 ERBB3P21860 1342 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms