RNA–Protein interactions for RNA: ENST00000466708.5

CCDC78-207, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-207ENST00000466708 CCDC17Q96LX7 622 aa23.43■■□□□ 1.34
CCDC78-207ENST00000466708 MTMR7Q9Y216 660 aa23.43■■□□□ 1.34
CCDC78-207ENST00000466708 AKR1B1P15121 316 aa23.42■■□□□ 1.34
CCDC78-207ENST00000466708 SHMT1P34896 483 aa23.42■■□□□ 1.34
CCDC78-207ENST00000466708 ATP2C1P98194 919 aaPredicted RBP23.42■■□□□ 1.34
CCDC78-207ENST00000466708 WWC2Q6AWC2 1192 aa23.42■■□□□ 1.34
CCDC78-207ENST00000466708 PLA2G4DQ86XP0 818 aa23.42■■□□□ 1.34
CCDC78-207ENST00000466708 DHX40Q8IX18 779 aaKnown RBP23.42■■□□□ 1.34
CCDC78-207ENST00000466708 TTLL6Q8N841 843 aa23.42■■□□□ 1.34
CCDC78-207ENST00000466708 RRP36Q96EU6 259 aaKnown RBP23.42■■□□□ 1.34
CCDC78-207ENST00000466708 TRIM5Q9C035 493 aa23.42■■□□□ 1.34
CCDC78-207ENST00000466708 CSRNP2Q9H175 543 aa23.42■■□□□ 1.34
CCDC78-207ENST00000466708 STXBP3O00186 592 aa23.41■■□□□ 1.34
CCDC78-207ENST00000466708 ZNF500O60304 480 aaPredicted RBP23.41■■□□□ 1.34
CCDC78-207ENST00000466708 TTLL1O95922 423 aa23.41■■□□□ 1.34
CCDC78-207ENST00000466708 GOLGA8HP0CJ92 632 aa23.41■■□□□ 1.34
CCDC78-207ENST00000466708 RBM5P52756 815 aaKnown RBP eCLIP23.41■■□□□ 1.34
CCDC78-207ENST00000466708 NFIAQ12857 509 aa23.41■■□□□ 1.34
CCDC78-207ENST00000466708 ASPRV1Q53RT3 343 aa23.41■■□□□ 1.34
CCDC78-207ENST00000466708 USP17L2Q6R6M4 530 aa23.41■■□□□ 1.34
CCDC78-207ENST00000466708 CCDC34Q96HJ3 373 aa23.41■■□□□ 1.34
CCDC78-207ENST00000466708 M0R2N6 131 aa23.4■■□□□ 1.34
CCDC78-207ENST00000466708 ZNF75DP51815 510 aa23.4■■□□□ 1.34
CCDC78-207ENST00000466708 ZNF174Q15697 407 aa23.4■■□□□ 1.34
CCDC78-207ENST00000466708 DPCR1Q3MIW9 517 aa23.4■■□□□ 1.34
CCDC78-207ENST00000466708 SPECC1Q5M775 1068 aa23.4■■□□□ 1.34
CCDC78-207ENST00000466708 HEATR3Q7Z4Q2 680 aa23.4■■□□□ 1.34
CCDC78-207ENST00000466708 METTL16Q86W50 562 aaKnown RBP23.4■■□□□ 1.34
CCDC78-207ENST00000466708 RTKN2Q8IZC4 609 aa23.4■■□□□ 1.34
CCDC78-207ENST00000466708 hCG_1984214I3L0E3 225 aa23.4■■□□□ 1.34
CCDC78-207ENST00000466708 POLR2DO15514 142 aaKnown RBP23.4■■□□□ 1.34
CCDC78-207ENST00000466708 PPIP5K2O43314 1243 aa23.4■■□□□ 1.34
CCDC78-207ENST00000466708 C21orf2O43822 256 aa23.4■■□□□ 1.34
CCDC78-207ENST00000466708 SNHG28P0DPA3 235 aa23.4■■□□□ 1.34
CCDC78-207ENST00000466708 PDHBP11177 359 aa23.4■■□□□ 1.34
CCDC78-207ENST00000466708 CCDC93Q567U6 631 aa23.4■■□□□ 1.34
CCDC78-207ENST00000466708 NOM1Q5C9Z4 860 aaKnown RBP23.4■■□□□ 1.34
CCDC78-207ENST00000466708 ZNF713Q8N859 430 aaPredicted RBP23.4■■□□□ 1.34
CCDC78-207ENST00000466708 SEC63Q9UGP8 760 aaKnown RBP23.4■■□□□ 1.34
CCDC78-207ENST00000466708 MDM2Q00987 491 aaPredicted RBP23.39■■□□□ 1.33
CCDC78-207ENST00000466708 PTGDRQ13258 359 aa23.39■■□□□ 1.33
CCDC78-207ENST00000466708 TYW1BQ6NUM6 668 aa23.39■■□□□ 1.33
CCDC78-207ENST00000466708 ZMYND12Q9H0C1 365 aa23.39■■□□□ 1.33
CCDC78-207ENST00000466708 RIOX1Q9H6W3 641 aa23.39■■□□□ 1.33
CCDC78-207ENST00000466708 PI4KBQ9UBF8 816 aa23.39■■□□□ 1.33
CCDC78-207ENST00000466708 A0A087WWV3 80 aa23.38■■□□□ 1.33
CCDC78-207ENST00000466708 CCDC194A0A1B0GVG4 234 aa23.38■■□□□ 1.33
CCDC78-207ENST00000466708 USP17L5A8MUK1 530 aa23.38■■□□□ 1.33
CCDC78-207ENST00000466708 CDC25BP30305 580 aa23.38■■□□□ 1.33
CCDC78-207ENST00000466708 PNOCQ13519 176 aa23.38■■□□□ 1.33
CCDC78-207ENST00000466708 ARL6IP4Q66PJ3 421 aaKnown RBP23.38■■□□□ 1.33
CCDC78-207ENST00000466708 AOPEPQ8N6M6 819 aa23.38■■□□□ 1.33
CCDC78-207ENST00000466708 PSMD1Q99460 953 aa23.38■■□□□ 1.33
CCDC78-207ENST00000466708 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.38■■□□□ 1.33
CCDC78-207ENST00000466708 GREB1LQ9C091 1923 aaPredicted RBP23.38■■□□□ 1.33
CCDC78-207ENST00000466708 SMTNL1A8MU46 457 aa23.38■■□□□ 1.33
CCDC78-207ENST00000466708 BIN1O00499 593 aa23.38■■□□□ 1.33
CCDC78-207ENST00000466708 WNT7AO00755 349 aa23.38■■□□□ 1.33
CCDC78-207ENST00000466708 CLIP2Q9UDT6 1046 aa23.38■■□□□ 1.33
CCDC78-207ENST00000466708 GNA11P29992 359 aa23.37■■□□□ 1.33
CCDC78-207ENST00000466708 POSTNQ15063 836 aa23.37■■□□□ 1.33
CCDC78-207ENST00000466708 C6orf50Q9HD87 102 aa23.37■■□□□ 1.33
CCDC78-207ENST00000466708 FAM198AQ9UFP1 575 aa23.37■■□□□ 1.33
CCDC78-207ENST00000466708 SERTAD1Q9UHV2 236 aa23.37■■□□□ 1.33
CCDC78-207ENST00000466708 PCDHA6Q9UN73 950 aa23.37■■□□□ 1.33
CCDC78-207ENST00000466708 PCDHA8Q9Y5H6 950 aa23.37■■□□□ 1.33
CCDC78-207ENST00000466708 PSME4Q14997 1843 aa23.36■■□□□ 1.33
CCDC78-207ENST00000466708 NAPAP54920 295 aa23.36■■□□□ 1.33
CCDC78-207ENST00000466708 TPM4P67936 248 aa23.36■■□□□ 1.33
CCDC78-207ENST00000466708 FOXP4Q8IVH2 680 aaPredicted RBP23.36■■□□□ 1.33
CCDC78-207ENST00000466708 ZFPM1Q8IX07 1006 aa23.36■■□□□ 1.33
CCDC78-207ENST00000466708 MRFAP1L1Q96HT8 127 aa23.36■■□□□ 1.33
CCDC78-207ENST00000466708 PYM1Q9BRP8 204 aaKnown RBP23.36■■□□□ 1.33
CCDC78-207ENST00000466708 PDGFDQ9GZP0 370 aaPredicted RBP23.36■■□□□ 1.33
CCDC78-207ENST00000466708 VPS33BQ9H267 617 aa23.36■■□□□ 1.33
CCDC78-207ENST00000466708 PCDHA5Q9Y5H7 936 aa23.36■■□□□ 1.33
CCDC78-207ENST00000466708 IKBKBO14920 756 aa23.36■■□□□ 1.33
CCDC78-207ENST00000466708 ADAMTS3O15072 1205 aa23.36■■□□□ 1.33
CCDC78-207ENST00000466708 ACTN4O43707 911 aaKnown RBP23.36■■□□□ 1.33
CCDC78-207ENST00000466708 NT5DC1Q5TFE4 455 aa23.36■■□□□ 1.33
CCDC78-207ENST00000466708 DEFB132Q7Z7B7 95 aa23.36■■□□□ 1.33
CCDC78-207ENST00000466708 ESYT2A0FGR8 921 aa23.35■■□□□ 1.33
CCDC78-207ENST00000466708 YDJCA8MPS7 323 aa23.35■■□□□ 1.33
CCDC78-207ENST00000466708 MCM7P33993 719 aa23.35■■□□□ 1.33
CCDC78-207ENST00000466708 SOGA3Q5TF21 947 aa23.35■■□□□ 1.33
CCDC78-207ENST00000466708 USP49Q70CQ1 688 aa23.35■■□□□ 1.33
CCDC78-207ENST00000466708 RASGRP2Q7LDG7 609 aa23.35■■□□□ 1.33
CCDC78-207ENST00000466708 LRRC47Q8N1G4 583 aaKnown RBP23.35■■□□□ 1.33
CCDC78-207ENST00000466708 PCDHAC2Q9Y5I4 1007 aa23.35■■□□□ 1.33
CCDC78-207ENST00000466708 MPHOSPH10O00566 681 aaKnown RBP23.34■■□□□ 1.33
CCDC78-207ENST00000466708 ENTPD3O75355 529 aa23.34■■□□□ 1.33
CCDC78-207ENST00000466708 TCP10Q12799 353 aa23.34■■□□□ 1.33
CCDC78-207ENST00000466708 GPATCH4Q5T3I0 446 aaKnown RBP23.34■■□□□ 1.33
CCDC78-207ENST00000466708 KRT25Q7Z3Z0 450 aa23.34■■□□□ 1.33
CCDC78-207ENST00000466708 SPC24Q8NBT2 197 aa23.34■■□□□ 1.33
CCDC78-207ENST00000466708 SYMPKQ92797 1274 aaKnown RBP23.34■■□□□ 1.33
CCDC78-207ENST00000466708 PIGSQ96S52 555 aa23.34■■□□□ 1.33
CCDC78-207ENST00000466708 CPVLQ9H3G5 476 aa23.34■■□□□ 1.33
CCDC78-207ENST00000466708 SIPA1L1O43166 1804 aa23.34■■□□□ 1.33
CCDC78-207ENST00000466708 COL2A1P02458 1487 aaPredicted RBP23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms