RNA–Protein interactions for RNA: ENST00000466704.1

CALD1-214, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 903 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-214ENST00000466704 C9IYK1 514 aa6.28□□□□□ -1.4
CALD1-214ENST00000466704 TP53P04637 393 aaPredicted RBP6.28□□□□□ -1.4
CALD1-214ENST00000466704 FGRP09769 529 aa6.28□□□□□ -1.4
CALD1-214ENST00000466704 IRAK1P51617 712 aa6.28□□□□□ -1.4
CALD1-214ENST00000466704 SNW1Q13573 536 aaKnown RBP6.28□□□□□ -1.4
CALD1-214ENST00000466704 SLC23A3Q6PIS1 610 aa6.28□□□□□ -1.4
CALD1-214ENST00000466704 TMC3Q7Z5M5 1100 aa6.28□□□□□ -1.4
CALD1-214ENST00000466704 FAM169BQ8N8A8 192 aa6.28□□□□□ -1.4
CALD1-214ENST00000466704 PRDM14Q9GZV8 571 aa6.28□□□□□ -1.4
CALD1-214ENST00000466704 PHAXQ9H814 394 aaKnown RBP6.28□□□□□ -1.4
CALD1-214ENST00000466704 PRDM7Q9NQW5 492 aa6.28□□□□□ -1.4
CALD1-214ENST00000466704 LMCD1Q9NZU5 365 aa6.28□□□□□ -1.4
CALD1-214ENST00000466704 LTBP3Q9NS15 1303 aa6.27□□□□□ -1.41
CALD1-214ENST00000466704 AUHQ13825 339 aaKnown RBP6.27□□□□□ -1.41
CALD1-214ENST00000466704 ZNF792Q3KQV3 632 aa6.27□□□□□ -1.41
CALD1-214ENST00000466704 GNPTABQ3T906 1256 aa6.27□□□□□ -1.41
CALD1-214ENST00000466704 PPFIBP1Q86W92 1011 aa6.27□□□□□ -1.41
CALD1-214ENST00000466704 C7orf61Q8IZ16 206 aa6.27□□□□□ -1.41
CALD1-214ENST00000466704 ENOX1Q8TC92 643 aaKnown RBP6.27□□□□□ -1.41
CALD1-214ENST00000466704 SYTL4Q96C24 671 aaPredicted RBP6.27□□□□□ -1.41
CALD1-214ENST00000466704 ZNF214Q9UL59 606 aaPredicted RBP6.27□□□□□ -1.41
CALD1-214ENST00000466704 SSU72P8A0A1W2PR75 194 aa6.26□□□□□ -1.41
CALD1-214ENST00000466704 SMAD7O15105 426 aaKnown RBP6.26□□□□□ -1.41
CALD1-214ENST00000466704 ESR1P03372 595 aa6.26□□□□□ -1.41
CALD1-214ENST00000466704 CASP7P55210 303 aa6.26□□□□□ -1.41
CALD1-214ENST00000466704 SLC7A5Q01650 507 aa6.26□□□□□ -1.41
CALD1-214ENST00000466704 EGR3Q06889 387 aa6.26□□□□□ -1.41
CALD1-214ENST00000466704 TNNI3KQ59H18 835 aa6.26□□□□□ -1.41
CALD1-214ENST00000466704 NOL9Q5SY16 702 aaKnown RBP6.26□□□□□ -1.41
CALD1-214ENST00000466704 DCAF15Q66K64 600 aa6.26□□□□□ -1.41
CALD1-214ENST00000466704 MCTP1Q6DN14 999 aa6.26□□□□□ -1.41
CALD1-214ENST00000466704 MCF2L2Q86YR7 1114 aa6.26□□□□□ -1.41
CALD1-214ENST00000466704 SYTL5Q8TDW5 730 aaPredicted RBP6.26□□□□□ -1.41
CALD1-214ENST00000466704 C8orf37Q96NL8 207 aa6.26□□□□□ -1.41
CALD1-214ENST00000466704 GMLQ99445 158 aa6.26□□□□□ -1.41
CALD1-214ENST00000466704 DSCC1Q9BVC3 393 aa6.26□□□□□ -1.41
CALD1-214ENST00000466704 HDAC8Q9BY41 377 aa6.26□□□□□ -1.41
CALD1-214ENST00000466704 ZNF408Q9H9D4 720 aa6.26□□□□□ -1.41
CALD1-214ENST00000466704 RC3H2Q9HBD1 1191 aaKnown RBP6.26□□□□□ -1.41
CALD1-214ENST00000466704 GFOD1Q9NXC2 390 aa6.26□□□□□ -1.41
CALD1-214ENST00000466704 ACTR10Q9NZ32 417 aa6.26□□□□□ -1.41
CALD1-214ENST00000466704 PCDHB10Q9UN67 800 aa6.26□□□□□ -1.41
CALD1-214ENST00000466704 R3HCC1Q9Y3T6 440 aaKnown RBP6.26□□□□□ -1.41
CALD1-214ENST00000466704 MEIS1O00470 390 aa6.25□□□□□ -1.41
CALD1-214ENST00000466704 SIGLEC6O43699 453 aa6.25□□□□□ -1.41
CALD1-214ENST00000466704 PRAMEF1O95521 474 aa6.25□□□□□ -1.41
CALD1-214ENST00000466704 RNASE1P07998 156 aaKnown RBP6.25□□□□□ -1.41
CALD1-214ENST00000466704 ETFBP38117 255 aa6.25□□□□□ -1.41
CALD1-214ENST00000466704 TCEAL1Q15170 157 aa6.25□□□□□ -1.41
CALD1-214ENST00000466704 GAB4Q2WGN9 574 aa6.25□□□□□ -1.41
CALD1-214ENST00000466704 AXDND1Q5T1B0 1012 aaPredicted RBP6.25□□□□□ -1.41
CALD1-214ENST00000466704 LARP1BQ659C4 914 aaKnown RBP6.25□□□□□ -1.41
CALD1-214ENST00000466704 VHLLQ6RSH7 139 aa6.25□□□□□ -1.41
CALD1-214ENST00000466704 DAGLBQ8NCG7 672 aa6.25□□□□□ -1.41
CALD1-214ENST00000466704 TANGO6Q9C0B7 1094 aa6.25□□□□□ -1.41
CALD1-214ENST00000466704 CHST7Q9NS84 486 aa6.25□□□□□ -1.41
CALD1-214ENST00000466704 MBNL3Q9NUK0 354 aaKnown RBP6.25□□□□□ -1.41
CALD1-214ENST00000466704 SLAMF8Q9P0V8 285 aa6.25□□□□□ -1.41
CALD1-214ENST00000466704 PRKAG3Q9UGI9 489 aa6.25□□□□□ -1.41
CALD1-214ENST00000466704 ADGRE2Q9UHX3 823 aa6.25□□□□□ -1.41
CALD1-214ENST00000466704 ADAMTS6Q9UKP5 1117 aa6.25□□□□□ -1.41
CALD1-214ENST00000466704 PCDHA11Q9Y5I1 949 aa6.25□□□□□ -1.41
CALD1-214ENST00000466704 ITGA4P13612 1032 aa6.24□□□□□ -1.41
CALD1-214ENST00000466704 ANKRD39Q53RE8 183 aa6.24□□□□□ -1.41
CALD1-214ENST00000466704 HEATR6Q6AI08 1181 aaKnown RBP6.24□□□□□ -1.41
CALD1-214ENST00000466704 ZNF655Q8N720 491 aaPredicted RBP6.24□□□□□ -1.41
CALD1-214ENST00000466704 TCTN2Q96GX1 697 aa6.24□□□□□ -1.41
CALD1-214ENST00000466704 CCDC120Q96HB5 630 aa6.24□□□□□ -1.41
CALD1-214ENST00000466704 ALPK1Q96QP1 1244 aa6.24□□□□□ -1.41
CALD1-214ENST00000466704 MINPP1Q9UNW1 487 aa6.24□□□□□ -1.41
CALD1-214ENST00000466704 CD247P20963 164 aa6.23□□□□□ -1.41
CALD1-214ENST00000466704 PCBP3P57721 371 aaKnown RBP6.23□□□□□ -1.41
CALD1-214ENST00000466704 KIAA1211LQ6NV74 962 aa6.23□□□□□ -1.41
CALD1-214ENST00000466704 ADAT2Q7Z6V5 191 aaKnown RBP6.23□□□□□ -1.41
CALD1-214ENST00000466704 LRRN4CLQ8ND94 238 aa6.23□□□□□ -1.41
CALD1-214ENST00000466704 HAUS7Q99871 368 aa6.23□□□□□ -1.41
CALD1-214ENST00000466704 GBP3Q9H0R5 595 aa6.23□□□□□ -1.41
CALD1-214ENST00000466704 GP6Q9HCN6 339 aa6.23□□□□□ -1.41
CALD1-214ENST00000466704 PRR13Q9NZ81 148 aa6.23□□□□□ -1.41
CALD1-214ENST00000466704 PPP1R1BQ9UD71 204 aaPredicted RBP6.23□□□□□ -1.41
CALD1-214ENST00000466704 SHOXO15266 292 aa6.22□□□□□ -1.41
CALD1-214ENST00000466704 STK10O94804 968 aaKnown RBP6.22□□□□□ -1.41
CALD1-214ENST00000466704 SYPP08247 313 aa6.22□□□□□ -1.41
CALD1-214ENST00000466704 ATP2B1P20020 1258 aa6.22□□□□□ -1.41
CALD1-214ENST00000466704 CWF19L1Q69YN2 538 aaKnown RBP6.22□□□□□ -1.41
CALD1-214ENST00000466704 RNF111Q6ZNA4 994 aa6.22□□□□□ -1.41
CALD1-214ENST00000466704 CBLL1Q75N03 491 aa6.22□□□□□ -1.41
CALD1-214ENST00000466704 USHBP1Q8N6Y0 703 aa6.22□□□□□ -1.41
CALD1-214ENST00000466704 BRF1Q92994 677 aa6.22□□□□□ -1.41
CALD1-214ENST00000466704 FOXP3Q9BZS1 431 aa6.22□□□□□ -1.41
CALD1-214ENST00000466704 TCFL5Q9UL49 500 aa6.22□□□□□ -1.41
CALD1-214ENST00000466704 SUGT1Q9Y2Z0 365 aa6.22□□□□□ -1.41
CALD1-214ENST00000466704 ZNF451Q9Y4E5 1061 aa6.22□□□□□ -1.41
CALD1-214ENST00000466704 DNAJC25-GNG10A0A024R161 153 aa6.21□□□□□ -1.42
CALD1-214ENST00000466704 BIN1O00499 593 aa6.21□□□□□ -1.42
CALD1-214ENST00000466704 CBFA2T2O43439 604 aa6.21□□□□□ -1.42
CALD1-214ENST00000466704 DDAH1O94760 285 aa6.21□□□□□ -1.42
CALD1-214ENST00000466704 RPL10P27635 214 aaKnown RBP6.21□□□□□ -1.42
CALD1-214ENST00000466704 NCAPHQ15003 741 aa6.21□□□□□ -1.42
CALD1-214ENST00000466704 FXNQ16595 210 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms