RNA–Protein interactions for RNA: ENST00000465238.5

COL7A1-205, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-205ENST00000465238 ARHGEF10LQ9HCE6 1279 aa21.06■□□□□ 0.96
COL7A1-205ENST00000465238 A0A1W2PPC1 479 aa21.05■□□□□ 0.96
COL7A1-205ENST00000465238 HOXC6P09630 235 aa21.05■□□□□ 0.96
COL7A1-205ENST00000465238 VPS53Q5VIR6 699 aa21.05■□□□□ 0.96
COL7A1-205ENST00000465238 LPAR1Q92633 364 aa21.05■□□□□ 0.96
COL7A1-205ENST00000465238 TANGO6Q9C0B7 1094 aa21.05■□□□□ 0.96
COL7A1-205ENST00000465238 SZT2Q5T011 3432 aa21.05■□□□□ 0.96
COL7A1-205ENST00000465238 RLFQ13129 1914 aa21.04■□□□□ 0.96
COL7A1-205ENST00000465238 AKR1B1P15121 316 aa21.04■□□□□ 0.96
COL7A1-205ENST00000465238 CCND3P30281 292 aaPredicted RBP21.04■□□□□ 0.96
COL7A1-205ENST00000465238 ICA1Q05084 483 aa21.04■□□□□ 0.96
COL7A1-205ENST00000465238 GRB14Q14449 540 aa21.04■□□□□ 0.96
COL7A1-205ENST00000465238 MFSD14CQ5VZR4 134 aa21.04■□□□□ 0.96
COL7A1-205ENST00000465238 TMX2Q9Y320 296 aa21.04■□□□□ 0.96
COL7A1-205ENST00000465238 HSPD1P10809 573 aaKnown RBP21.03■□□□□ 0.96
COL7A1-205ENST00000465238 CDK8P49336 464 aa21.03■□□□□ 0.96
COL7A1-205ENST00000465238 ALX1Q15699 326 aa21.03■□□□□ 0.96
COL7A1-205ENST00000465238 LHX8Q68G74 356 aa21.03■□□□□ 0.96
COL7A1-205ENST00000465238 C16orf86Q6ZW13 317 aa21.03■□□□□ 0.96
COL7A1-205ENST00000465238 MB21D1Q8N884 522 aa21.03■□□□□ 0.96
COL7A1-205ENST00000465238 A0A0G2JMZ2 1700 aa21.03■□□□□ 0.96
COL7A1-205ENST00000465238 RAD50Q92878 1312 aa21.03■□□□□ 0.96
COL7A1-205ENST00000465238 STRNO43815 780 aa21.02■□□□□ 0.96
COL7A1-205ENST00000465238 ATP2B2Q01814 1243 aa21.02■□□□□ 0.96
COL7A1-205ENST00000465238 SIAH1Q8IUQ4 282 aa21.02■□□□□ 0.96
COL7A1-205ENST00000465238 C7orf61Q8IZ16 206 aa21.02■□□□□ 0.96
COL7A1-205ENST00000465238 SHCBP1Q8NEM2 672 aa21.02■□□□□ 0.96
COL7A1-205ENST00000465238 MOV10L1Q9BXT6 1211 aaKnown RBP21.02■□□□□ 0.96
COL7A1-205ENST00000465238 VCPKMTQ9H867 229 aa21.02■□□□□ 0.96
COL7A1-205ENST00000465238 FLRT1Q9NZU1 646 aa21.02■□□□□ 0.96
COL7A1-205ENST00000465238 ZNF236Q9UL36 1845 aa21.01■□□□□ 0.95
COL7A1-205ENST00000465238 FOXP2O15409 715 aa21.01■□□□□ 0.95
COL7A1-205ENST00000465238 SLC3A2P08195 630 aaKnown RBP21.01■□□□□ 0.95
COL7A1-205ENST00000465238 DSG3P32926 999 aa21.01■□□□□ 0.95
COL7A1-205ENST00000465238 KIAA1755Q5JYT7 1200 aa21.01■□□□□ 0.95
COL7A1-205ENST00000465238 CLEC10AQ8IUN9 316 aa21.01■□□□□ 0.95
COL7A1-205ENST00000465238 SPATC1LQ9H0A9 340 aa21.01■□□□□ 0.95
COL7A1-205ENST00000465238 FRMPD3Q5JV73 1810 aa21.01■□□□□ 0.95
COL7A1-205ENST00000465238 SMIM22K7EJ46 135 aa21■□□□□ 0.95
COL7A1-205ENST00000465238 WDR46O15213 610 aaKnown RBP21■□□□□ 0.95
COL7A1-205ENST00000465238 FLOT1O75955 427 aa21■□□□□ 0.95
COL7A1-205ENST00000465238 FGAP02671 866 aa21■□□□□ 0.95
COL7A1-205ENST00000465238 COL6A1P12109 1028 aa21■□□□□ 0.95
COL7A1-205ENST00000465238 PPARAQ07869 468 aa21■□□□□ 0.95
COL7A1-205ENST00000465238 CASC1Q6TDU7 716 aa21■□□□□ 0.95
COL7A1-205ENST00000465238 SPICE1Q8N0Z3 855 aa21■□□□□ 0.95
COL7A1-205ENST00000465238 STK11IPQ8N1F8 1099 aa21■□□□□ 0.95
COL7A1-205ENST00000465238 KANSL2Q9H9L4 492 aa21■□□□□ 0.95
COL7A1-205ENST00000465238 ZNF287Q9HBT7 754 aa21■□□□□ 0.95
COL7A1-205ENST00000465238 PFASO15067 1338 aa21■□□□□ 0.95
COL7A1-205ENST00000465238 PARP14Q460N5 1801 aa20.99■□□□□ 0.95
COL7A1-205ENST00000465238 MSCO60682 206 aa20.99■□□□□ 0.95
COL7A1-205ENST00000465238 DPP9Q86TI2 863 aa20.99■□□□□ 0.95
COL7A1-205ENST00000465238 NPLOC4Q8TAT6 608 aa20.99■□□□□ 0.95
COL7A1-205ENST00000465238 GDF15Q99988 308 aa20.99■□□□□ 0.95
COL7A1-205ENST00000465238 DSCC1Q9BVC3 393 aa20.99■□□□□ 0.95
COL7A1-205ENST00000465238 MROH8Q9H579 483 aa20.99■□□□□ 0.95
COL7A1-205ENST00000465238 MKNK2Q9HBH9 465 aa20.99■□□□□ 0.95
COL7A1-205ENST00000465238 SGSM2O43147 1006 aa20.98■□□□□ 0.95
COL7A1-205ENST00000465238 CDC45O75419 566 aa20.98■□□□□ 0.95
COL7A1-205ENST00000465238 ERCC3P19447 782 aa20.98■□□□□ 0.95
COL7A1-205ENST00000465238 ADORA2AP29274 412 aa20.98■□□□□ 0.95
COL7A1-205ENST00000465238 BMP8BP34820 402 aa20.98■□□□□ 0.95
COL7A1-205ENST00000465238 DDX20Q9UHI6 824 aaKnown RBP20.98■□□□□ 0.95
COL7A1-205ENST00000465238 ZMYND8Q9ULU4 1186 aaPredicted RBP20.98■□□□□ 0.95
COL7A1-205ENST00000465238 ZMYM6O95789 1325 aa20.98■□□□□ 0.95
COL7A1-205ENST00000465238 ROBO3Q96MS0 1386 aa20.97■□□□□ 0.95
COL7A1-205ENST00000465238 LAMA3Q16787 3333 aa20.97■□□□□ 0.95
COL7A1-205ENST00000465238 IGHA2P01877 340 aa20.97■□□□□ 0.95
COL7A1-205ENST00000465238 EEF2P13639 858 aaKnown RBP20.97■□□□□ 0.95
COL7A1-205ENST00000465238 CYP2C19P33261 490 aa20.97■□□□□ 0.95
COL7A1-205ENST00000465238 PDE4BQ07343 736 aa20.97■□□□□ 0.95
COL7A1-205ENST00000465238 PLS1Q14651 629 aa20.97■□□□□ 0.95
COL7A1-205ENST00000465238 OLFML2BQ68BL8 750 aa20.97■□□□□ 0.95
COL7A1-205ENST00000465238 ABRAQ8N0Z2 381 aa20.97■□□□□ 0.95
COL7A1-205ENST00000465238 ATG4CQ96DT6 458 aa20.97■□□□□ 0.95
COL7A1-205ENST00000465238 IL25Q9H293 177 aa20.97■□□□□ 0.95
COL7A1-205ENST00000465238 SLC5A4Q9NY91 659 aa20.97■□□□□ 0.95
COL7A1-205ENST00000465238 CTNNA3Q9UI47 895 aa20.97■□□□□ 0.95
COL7A1-205ENST00000465238 DNAH12Q6ZR08 3092 aa20.97■□□□□ 0.95
COL7A1-205ENST00000465238 CNGA1P29973 690 aa20.96■□□□□ 0.95
COL7A1-205ENST00000465238 KIAA1211Q6ZU35 1233 aa20.96■□□□□ 0.95
COL7A1-205ENST00000465238 ZNF444Q8N0Y2 327 aaPredicted RBP20.96■□□□□ 0.95
COL7A1-205ENST00000465238 GOPCQ9HD26 462 aa20.96■□□□□ 0.95
COL7A1-205ENST00000465238 CYBAP13498 195 aa20.95■□□□□ 0.94
COL7A1-205ENST00000465238 CTDSPL2Q05D32 466 aa20.95■□□□□ 0.94
COL7A1-205ENST00000465238 NCAPG2Q86XI2 1143 aa20.95■□□□□ 0.94
COL7A1-205ENST00000465238 ESYT1Q9BSJ8 1104 aa20.95■□□□□ 0.94
COL7A1-205ENST00000465238 ANAPC4Q9UJX5 808 aa20.95■□□□□ 0.94
COL7A1-205ENST00000465238 ADAMTS5Q9UNA0 930 aa20.95■□□□□ 0.94
COL7A1-205ENST00000465238 GREB1LQ9C091 1923 aaPredicted RBP20.95■□□□□ 0.94
COL7A1-205ENST00000465238 COL11A1P12107 1806 aaPredicted RBP20.94■□□□□ 0.94
COL7A1-205ENST00000465238 ZNF213O14771 459 aa20.94■□□□□ 0.94
COL7A1-205ENST00000465238 SLC25A27O95847 323 aa20.94■□□□□ 0.94
COL7A1-205ENST00000465238 SYN1P17600 705 aa20.94■□□□□ 0.94
COL7A1-205ENST00000465238 ZNFX1Q9P2E3 1918 aaKnown RBP20.94■□□□□ 0.94
COL7A1-205ENST00000465238 COBLO75128 1261 aa20.93■□□□□ 0.94
COL7A1-205ENST00000465238 PRDM1O75626 825 aa20.93■□□□□ 0.94
COL7A1-205ENST00000465238 FCER1AP12319 257 aa20.93■□□□□ 0.94
COL7A1-205ENST00000465238 RASA1P20936 1047 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms