RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 ZNF521Q96K83 1311 aa6.72□□□□□ -1.33
CLK1-207ENST00000461981 ATP5J2-PTCD1G3V325 749 aa6.72□□□□□ -1.33
CLK1-207ENST00000461981 GRM8O00222 908 aa6.72□□□□□ -1.33
CLK1-207ENST00000461981 TBC1D8O95759 1140 aa6.72□□□□□ -1.33
CLK1-207ENST00000461981 FXR1P51114 621 aaKnown RBP eCLIP6.72□□□□□ -1.33
CLK1-207ENST00000461981 LACTBP83111 547 aaPredicted RBP6.72□□□□□ -1.33
CLK1-207ENST00000461981 CRHR2Q13324 411 aa6.72□□□□□ -1.33
CLK1-207ENST00000461981 SH3D19Q5HYK7 790 aa6.72□□□□□ -1.33
CLK1-207ENST00000461981 SPTY2D1Q68D10 685 aaPredicted RBP6.72□□□□□ -1.33
CLK1-207ENST00000461981 RIPOR2Q9Y4F9 1068 aa6.72□□□□□ -1.33
CLK1-207ENST00000461981 A0A087WUV0 522 aaPredicted RBP6.71□□□□□ -1.33
CLK1-207ENST00000461981 PI4KAP2A4QPH2 592 aa6.71□□□□□ -1.33
CLK1-207ENST00000461981 H3BQF6 201 aa6.71□□□□□ -1.33
CLK1-207ENST00000461981 SKILP12757 684 aa6.71□□□□□ -1.33
CLK1-207ENST00000461981 RDXP35241 583 aaKnown RBP6.71□□□□□ -1.33
CLK1-207ENST00000461981 CRKP46108 304 aa6.71□□□□□ -1.33
CLK1-207ENST00000461981 RWDD2BP57060 319 aa6.71□□□□□ -1.33
CLK1-207ENST00000461981 CCDC57Q2TAC2 916 aa6.71□□□□□ -1.33
CLK1-207ENST00000461981 CCDC183Q5T5S1 534 aa6.71□□□□□ -1.33
CLK1-207ENST00000461981 FILIP1Q7Z7B0 1213 aa6.71□□□□□ -1.33
CLK1-207ENST00000461981 RPUSD2Q8IZ73 545 aaKnown RBP6.71□□□□□ -1.33
CLK1-207ENST00000461981 PI4KAP1Q8N8J0 262 aa6.71□□□□□ -1.33
CLK1-207ENST00000461981 CACTINQ8WUQ7 758 aaKnown RBP6.71□□□□□ -1.33
CLK1-207ENST00000461981 SNCAIPQ9Y6H5 919 aa6.71□□□□□ -1.33
CLK1-207ENST00000461981 VAMP4O75379 141 aa6.71□□□□□ -1.34
CLK1-207ENST00000461981 GJA5P36382 358 aa6.71□□□□□ -1.34
CLK1-207ENST00000461981 RPS6KA3P51812 740 aa6.71□□□□□ -1.34
CLK1-207ENST00000461981 TRAF1Q13077 416 aa6.71□□□□□ -1.34
CLK1-207ENST00000461981 TBC1D25Q3MII6 688 aa6.71□□□□□ -1.34
CLK1-207ENST00000461981 CAVIN4Q5BKX8 364 aa6.71□□□□□ -1.34
CLK1-207ENST00000461981 DZIP1LQ8IYY4 767 aaKnown RBP6.71□□□□□ -1.34
CLK1-207ENST00000461981 CERS5Q8N5B7 392 aa6.71□□□□□ -1.34
CLK1-207ENST00000461981 VGLL2Q8N8G2 317 aa6.71□□□□□ -1.34
CLK1-207ENST00000461981 C8orf58Q8NAV2 365 aa6.71□□□□□ -1.34
CLK1-207ENST00000461981 MICAL1Q8TDZ2 1067 aa6.71□□□□□ -1.34
CLK1-207ENST00000461981 BRI3BPQ8WY22 251 aa6.71□□□□□ -1.34
CLK1-207ENST00000461981 UBXN4Q92575 508 aa6.71□□□□□ -1.34
CLK1-207ENST00000461981 OPTNQ96CV9 577 aa6.71□□□□□ -1.34
CLK1-207ENST00000461981 SEZ6LQ9BYH1 1024 aa6.71□□□□□ -1.34
CLK1-207ENST00000461981 TMEM165Q9HC07 324 aa6.71□□□□□ -1.34
CLK1-207ENST00000461981 CD248Q9HCU0 757 aa6.71□□□□□ -1.34
CLK1-207ENST00000461981 MORF4L1Q9UBU8 362 aa6.71□□□□□ -1.34
CLK1-207ENST00000461981 SMC3Q9UQE7 1217 aa6.71□□□□□ -1.34
CLK1-207ENST00000461981 CCL15-CCL14A0A0B4J2E2 113 aa6.71□□□□□ -1.34
CLK1-207ENST00000461981 A0A0G2JLL6 359 aaPredicted RBP6.71□□□□□ -1.34
CLK1-207ENST00000461981 PAX3P23760 479 aa6.71□□□□□ -1.34
CLK1-207ENST00000461981 GTF2IP78347 998 aa6.71□□□□□ -1.34
CLK1-207ENST00000461981 RASA3Q14644 834 aa6.71□□□□□ -1.34
CLK1-207ENST00000461981 TAF1CQ15572 869 aaPredicted RBP6.71□□□□□ -1.34
CLK1-207ENST00000461981 CCL15Q16663 113 aa6.71□□□□□ -1.34
CLK1-207ENST00000461981 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.71□□□□□ -1.34
CLK1-207ENST00000461981 TSHZ1Q6ZSZ6 1077 aa6.71□□□□□ -1.34
CLK1-207ENST00000461981 TBC1D9Q6ZT07 1266 aa6.71□□□□□ -1.34
CLK1-207ENST00000461981 PRRT2Q7Z6L0 340 aaPredicted RBP6.71□□□□□ -1.34
CLK1-207ENST00000461981 TRMT2AQ8IZ69 625 aaKnown RBP6.71□□□□□ -1.34
CLK1-207ENST00000461981 ARMC2Q8NEN0 867 aa6.71□□□□□ -1.34
CLK1-207ENST00000461981 TRIM5Q9C035 493 aa6.71□□□□□ -1.34
CLK1-207ENST00000461981 PHAXQ9H814 394 aaKnown RBP6.71□□□□□ -1.34
CLK1-207ENST00000461981 PSD3Q9NYI0 1048 aa6.71□□□□□ -1.34
CLK1-207ENST00000461981 ANAPC4Q9UJX5 808 aa6.71□□□□□ -1.34
CLK1-207ENST00000461981 ODF2LQ9ULJ1 636 aa6.71□□□□□ -1.34
CLK1-207ENST00000461981 APAF1O14727 1248 aa6.7□□□□□ -1.34
CLK1-207ENST00000461981 IFIT1P09914 478 aaKnown RBP6.7□□□□□ -1.34
CLK1-207ENST00000461981 ARID5BQ14865 1188 aa6.7□□□□□ -1.34
CLK1-207ENST00000461981 RBBP5Q15291 538 aaKnown RBP6.7□□□□□ -1.34
CLK1-207ENST00000461981 LRIT3Q3SXY7 679 aa6.7□□□□□ -1.34
CLK1-207ENST00000461981 METTL16Q86W50 562 aaKnown RBP6.7□□□□□ -1.34
CLK1-207ENST00000461981 ARL10Q8N8L6 244 aa6.7□□□□□ -1.34
CLK1-207ENST00000461981 CD99L2Q8TCZ2 262 aa6.7□□□□□ -1.34
CLK1-207ENST00000461981 BAG1Q99933 345 aaPredicted RBP6.7□□□□□ -1.34
CLK1-207ENST00000461981 USP26Q9BXU7 913 aa6.7□□□□□ -1.34
CLK1-207ENST00000461981 UBXN6Q9BZV1 441 aa6.7□□□□□ -1.34
CLK1-207ENST00000461981 MCM8Q9UJA3 840 aa6.7□□□□□ -1.34
CLK1-207ENST00000461981 DENND2AQ9ULE3 1009 aa6.7□□□□□ -1.34
CLK1-207ENST00000461981 ARIH1Q9Y4X5 557 aaPredicted RBP6.7□□□□□ -1.34
CLK1-207ENST00000461981 PLXNB2O15031 1838 aa6.7□□□□□ -1.34
CLK1-207ENST00000461981 ENO4A6NNW6 628 aa6.7□□□□□ -1.34
CLK1-207ENST00000461981 CCP110O43303 1012 aa6.7□□□□□ -1.34
CLK1-207ENST00000461981 XRCC5P13010 732 aaKnown RBP6.7□□□□□ -1.34
CLK1-207ENST00000461981 CLNS1AP54105 237 aaKnown RBP6.7□□□□□ -1.34
CLK1-207ENST00000461981 GSTO1P78417 241 aa6.7□□□□□ -1.34
CLK1-207ENST00000461981 USP4Q13107 963 aa6.7□□□□□ -1.34
CLK1-207ENST00000461981 PUM3Q15397 648 aaKnown RBP6.7□□□□□ -1.34
CLK1-207ENST00000461981 SLC9C1Q4G0N8 1177 aa6.7□□□□□ -1.34
CLK1-207ENST00000461981 RBM26Q5T8P6 1007 aaKnown RBP6.7□□□□□ -1.34
CLK1-207ENST00000461981 NOL8Q76FK4 1167 aaKnown RBP6.7□□□□□ -1.34
CLK1-207ENST00000461981 LUZP1Q86V48 1076 aa6.7□□□□□ -1.34
CLK1-207ENST00000461981 ERC1Q8IUD2 1116 aa6.7□□□□□ -1.34
CLK1-207ENST00000461981 ATL2Q8NHH9 583 aa6.7□□□□□ -1.34
CLK1-207ENST00000461981 MAF1Q9H063 256 aa6.7□□□□□ -1.34
CLK1-207ENST00000461981 TSPYL2Q9H2G4 693 aaPredicted RBP6.7□□□□□ -1.34
CLK1-207ENST00000461981 KCNQ5Q9NR82 932 aa6.7□□□□□ -1.34
CLK1-207ENST00000461981 ASTN2O75129 1339 aaPredicted RBP6.7□□□□□ -1.34
CLK1-207ENST00000461981 CCDC171Q6TFL3 1326 aa6.7□□□□□ -1.34
CLK1-207ENST00000461981 SNUPNO95149 360 aaKnown RBP6.69□□□□□ -1.34
CLK1-207ENST00000461981 ANXA1P04083 346 aa6.69□□□□□ -1.34
CLK1-207ENST00000461981 SLC5A1P13866 664 aa6.69□□□□□ -1.34
CLK1-207ENST00000461981 MCM2P49736 904 aa6.69□□□□□ -1.34
CLK1-207ENST00000461981 GRIK3Q13003 919 aa6.69□□□□□ -1.34
CLK1-207ENST00000461981 HDAC1Q13547 482 aaPredicted RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms