RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 MFSD14CQ5VZR4 134 aa14.87□□□□□ -0.03
HDAC4-207ENST00000461113 CTR9Q6PD62 1173 aa14.87□□□□□ -0.03
HDAC4-207ENST00000461113 SLC39A5Q6ZMH5 540 aa14.87□□□□□ -0.03
HDAC4-207ENST00000461113 SH3RF1Q7Z6J0 888 aa14.87□□□□□ -0.03
HDAC4-207ENST00000461113 TRIM43Q96BQ3 446 aaPredicted RBP14.87□□□□□ -0.03
HDAC4-207ENST00000461113 RNPC3Q96LT9 517 aaKnown RBP14.87□□□□□ -0.03
HDAC4-207ENST00000461113 TBC1D2Q9BYX2 928 aa14.87□□□□□ -0.03
HDAC4-207ENST00000461113 MKNK2Q9HBH9 465 aa14.87□□□□□ -0.03
HDAC4-207ENST00000461113 FLRT1Q9NZU1 646 aa14.87□□□□□ -0.03
HDAC4-207ENST00000461113 PTPRFP10586 1907 aa14.86□□□□□ -0.03
HDAC4-207ENST00000461113 CDC45O75419 566 aa14.86□□□□□ -0.03
HDAC4-207ENST00000461113 ASNSP08243 561 aa14.86□□□□□ -0.03
HDAC4-207ENST00000461113 HSPD1P10809 573 aaKnown RBP14.86□□□□□ -0.03
HDAC4-207ENST00000461113 HOXA7P31268 230 aaPredicted RBP14.86□□□□□ -0.03
HDAC4-207ENST00000461113 PLCD1P51178 756 aa14.86□□□□□ -0.03
HDAC4-207ENST00000461113 ERVK-9P63128 1117 aa14.86□□□□□ -0.03
HDAC4-207ENST00000461113 ERVK-24P63145 666 aa14.86□□□□□ -0.03
HDAC4-207ENST00000461113 PDE4BQ07343 736 aa14.86□□□□□ -0.03
HDAC4-207ENST00000461113 MAP2K5Q13163 448 aa14.86□□□□□ -0.03
HDAC4-207ENST00000461113 RRP1BQ14684 758 aaKnown RBP14.86□□□□□ -0.03
HDAC4-207ENST00000461113 ALX1Q15699 326 aa14.86□□□□□ -0.03
HDAC4-207ENST00000461113 TRIM60Q495X7 471 aa14.86□□□□□ -0.03
HDAC4-207ENST00000461113 CERKLQ49MI3 558 aaPredicted RBP14.86□□□□□ -0.03
HDAC4-207ENST00000461113 METTL16Q86W50 562 aaKnown RBP14.86□□□□□ -0.03
HDAC4-207ENST00000461113 SKAP1Q86WV1 359 aa14.86□□□□□ -0.03
HDAC4-207ENST00000461113 PAGR1Q9BTK6 254 aa14.86□□□□□ -0.03
HDAC4-207ENST00000461113 AS3MTQ9HBK9 375 aa14.86□□□□□ -0.03
HDAC4-207ENST00000461113 CWC22Q9HCG8 908 aaKnown RBP14.86□□□□□ -0.03
HDAC4-207ENST00000461113 PDLIM7Q9NR12 457 aa14.86□□□□□ -0.03
HDAC4-207ENST00000461113 PHIPQ8WWQ0 1821 aa14.85□□□□□ -0.03
HDAC4-207ENST00000461113 DOCK1Q14185 1865 aa14.85□□□□□ -0.03
HDAC4-207ENST00000461113 MSCO60682 206 aa14.85□□□□□ -0.03
HDAC4-207ENST00000461113 CYP2D6P10635 497 aa14.85□□□□□ -0.03
HDAC4-207ENST00000461113 DNAJB2P25686 324 aa14.85□□□□□ -0.03
HDAC4-207ENST00000461113 CAP2P40123 477 aa14.85□□□□□ -0.03
HDAC4-207ENST00000461113 EPHB4P54760 987 aa14.85□□□□□ -0.03
HDAC4-207ENST00000461113 MRPS5P82675 430 aaKnown RBP14.85□□□□□ -0.03
HDAC4-207ENST00000461113 MTMR2Q13614 643 aa14.85□□□□□ -0.03
HDAC4-207ENST00000461113 ZNF589Q86UQ0 364 aaPredicted RBP14.85□□□□□ -0.03
HDAC4-207ENST00000461113 ZNF444Q8N0Y2 327 aaPredicted RBP14.85□□□□□ -0.03
HDAC4-207ENST00000461113 CCDC17Q96LX7 622 aa14.85□□□□□ -0.03
HDAC4-207ENST00000461113 ZNF576Q9H609 170 aa14.85□□□□□ -0.03
HDAC4-207ENST00000461113 TMOD4Q9NZQ9 345 aa14.85□□□□□ -0.03
HDAC4-207ENST00000461113 THEGQ9P2T0 379 aa14.85□□□□□ -0.03
HDAC4-207ENST00000461113 MYO5AQ9Y4I1 1855 aaKnown RBP14.84□□□□□ -0.03
HDAC4-207ENST00000461113 MPHOSPH10O00566 681 aaKnown RBP14.84□□□□□ -0.03
HDAC4-207ENST00000461113 ABCB5Q2M3G0 1257 aa14.84□□□□□ -0.03
HDAC4-207ENST00000461113 POTEEQ6S8J3 1075 aa14.84□□□□□ -0.03
HDAC4-207ENST00000461113 DSCC1Q9BVC3 393 aa14.84□□□□□ -0.03
HDAC4-207ENST00000461113 CYP2D7A0A087X1C5 515 aa14.83□□□□□ -0.04
HDAC4-207ENST00000461113 KBTBD13C9JR72 458 aa14.83□□□□□ -0.04
HDAC4-207ENST00000461113 ZNF213O14771 459 aa14.83□□□□□ -0.04
HDAC4-207ENST00000461113 EIF5BO60841 1220 aaKnown RBP14.83□□□□□ -0.04
HDAC4-207ENST00000461113 FGAP02671 866 aa14.83□□□□□ -0.04
HDAC4-207ENST00000461113 CDK8P49336 464 aa14.83□□□□□ -0.04
HDAC4-207ENST00000461113 BACE1P56817 501 aa14.83□□□□□ -0.04
HDAC4-207ENST00000461113 ATP2B2Q01814 1243 aa14.83□□□□□ -0.04
HDAC4-207ENST00000461113 GABPAQ06546 454 aa14.83□□□□□ -0.04
HDAC4-207ENST00000461113 PPARAQ07869 468 aa14.83□□□□□ -0.04
HDAC4-207ENST00000461113 VPS53Q5VIR6 699 aa14.83□□□□□ -0.04
HDAC4-207ENST00000461113 TATDN1Q6P1N9 297 aa14.83□□□□□ -0.04
HDAC4-207ENST00000461113 C16orf86Q6ZW13 317 aa14.83□□□□□ -0.04
HDAC4-207ENST00000461113 ARRDC4Q8NCT1 418 aa14.83□□□□□ -0.04
HDAC4-207ENST00000461113 TRPV1Q8NER1 839 aa14.83□□□□□ -0.04
HDAC4-207ENST00000461113 IL27Q8NEV9 243 aa14.83□□□□□ -0.04
HDAC4-207ENST00000461113 DYNLL2Q96FJ2 89 aa14.83□□□□□ -0.04
HDAC4-207ENST00000461113 WDR18Q9BV38 432 aa14.83□□□□□ -0.04
HDAC4-207ENST00000461113 C1QTNF1Q9BXJ1 281 aa14.83□□□□□ -0.04
HDAC4-207ENST00000461113 EPB41L4AQ9HCS5 686 aaPredicted RBP14.83□□□□□ -0.04
HDAC4-207ENST00000461113 SYNGAP1Q96PV0 1343 aa14.83□□□□□ -0.04
HDAC4-207ENST00000461113 LOC285556D6RIA3 1793 aa14.83□□□□□ -0.04
HDAC4-207ENST00000461113 LTBP2Q14767 1821 aa14.82□□□□□ -0.04
HDAC4-207ENST00000461113 MYH7P12883 1935 aa14.82□□□□□ -0.04
HDAC4-207ENST00000461113 SGSM2O43147 1006 aa14.82□□□□□ -0.04
HDAC4-207ENST00000461113 GDF11O95390 407 aa14.82□□□□□ -0.04
HDAC4-207ENST00000461113 MYCNP04198 464 aaPredicted RBP14.82□□□□□ -0.04
HDAC4-207ENST00000461113 PCP11498 1178 aaKnown RBP14.82□□□□□ -0.04
HDAC4-207ENST00000461113 ITGB8P26012 769 aa14.82□□□□□ -0.04
HDAC4-207ENST00000461113 CYP2C19P33261 490 aa14.82□□□□□ -0.04
HDAC4-207ENST00000461113 SNX17Q15036 470 aa14.82□□□□□ -0.04
HDAC4-207ENST00000461113 IMMTQ16891 758 aaKnown RBP14.82□□□□□ -0.04
HDAC4-207ENST00000461113 STK11IPQ8N1F8 1099 aa14.82□□□□□ -0.04
HDAC4-207ENST00000461113 TIFAQ96CG3 184 aa14.82□□□□□ -0.04
HDAC4-207ENST00000461113 GAS2L1Q99501 681 aaPredicted RBP14.82□□□□□ -0.04
HDAC4-207ENST00000461113 RNF41Q9H4P4 317 aaPredicted RBP14.82□□□□□ -0.04
HDAC4-207ENST00000461113 TOMM22Q9NS69 142 aa14.82□□□□□ -0.04
HDAC4-207ENST00000461113 GTF3C3Q9Y5Q9 886 aa14.82□□□□□ -0.04
HDAC4-207ENST00000461113 ZMYM6O95789 1325 aa14.82□□□□□ -0.04
HDAC4-207ENST00000461113 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.81□□□□□ -0.04
HDAC4-207ENST00000461113 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.81□□□□□ -0.04
HDAC4-207ENST00000461113 GH2P01242 217 aa14.81□□□□□ -0.04
HDAC4-207ENST00000461113 SHMT1P34896 483 aa14.81□□□□□ -0.04
HDAC4-207ENST00000461113 ADCYAP1R1P41586 468 aa14.81□□□□□ -0.04
HDAC4-207ENST00000461113 RAB3GAP1Q15042 981 aa14.81□□□□□ -0.04
HDAC4-207ENST00000461113 CCDC85BQ15834 202 aaPredicted RBP14.81□□□□□ -0.04
HDAC4-207ENST00000461113 PPP4R3BQ5MIZ7 849 aa14.81□□□□□ -0.04
HDAC4-207ENST00000461113 AKNAD1Q5T1N1 836 aa14.81□□□□□ -0.04
HDAC4-207ENST00000461113 WDR78Q5VTH9 848 aa14.81□□□□□ -0.04
HDAC4-207ENST00000461113 ANO1Q5XXA6 986 aa14.81□□□□□ -0.04
HDAC4-207ENST00000461113 TMEM179Q6ZVK1 233 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms