RNA–Protein interactions for RNA: ENST00000460952.1

STRC-207, Transcript of stereocilin, humanhuman

TSL 2

Gene STRC, Length 543 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-207ENST00000460952 PAXIP1Q6ZW49 1069 aaPredicted RBP13.51□□□□□ -0.25
STRC-207ENST00000460952 RAB11FIP4Q86YS3 637 aa13.51□□□□□ -0.25
STRC-207ENST00000460952 BRI3BPQ8WY22 251 aa13.51□□□□□ -0.25
STRC-207ENST00000460952 CAPNS2Q96L46 248 aa13.51□□□□□ -0.25
STRC-207ENST00000460952 LARP6Q9BRS8 491 aaKnown RBP13.51□□□□□ -0.25
STRC-207ENST00000460952 AGTPBP1Q9UPW5 1226 aa13.51□□□□□ -0.25
STRC-207ENST00000460952 HPS5Q9UPZ3 1129 aa13.51□□□□□ -0.25
STRC-207ENST00000460952 MTMR7Q9Y216 660 aa13.51□□□□□ -0.25
STRC-207ENST00000460952 FRMPD2Q68DX3 1309 aaPredicted RBP13.5□□□□□ -0.25
STRC-207ENST00000460952 CCL15-CCL14A0A0B4J2E2 113 aa13.5□□□□□ -0.25
STRC-207ENST00000460952 MANSC4A6NHS7 340 aaPredicted RBP13.5□□□□□ -0.25
STRC-207ENST00000460952 RAD21O60216 631 aa13.5□□□□□ -0.25
STRC-207ENST00000460952 LARGE1O95461 756 aa13.5□□□□□ -0.25
STRC-207ENST00000460952 RXRAP19793 462 aa13.5□□□□□ -0.25
STRC-207ENST00000460952 PDIA3P30101 505 aaKnown RBP13.5□□□□□ -0.25
STRC-207ENST00000460952 SLC1A4P43007 532 aa13.5□□□□□ -0.25
STRC-207ENST00000460952 MCM2P49736 904 aa13.5□□□□□ -0.25
STRC-207ENST00000460952 CCL15Q16663 113 aa13.5□□□□□ -0.25
STRC-207ENST00000460952 CCDC96Q2M329 555 aa13.5□□□□□ -0.25
STRC-207ENST00000460952 ASPRV1Q53RT3 343 aa13.5□□□□□ -0.25
STRC-207ENST00000460952 FAM83BQ5T0W9 1011 aa13.5□□□□□ -0.25
STRC-207ENST00000460952 TREML2Q5T2D2 321 aa13.5□□□□□ -0.25
STRC-207ENST00000460952 SYNE3Q6ZMZ3 975 aa13.5□□□□□ -0.25
STRC-207ENST00000460952 GADL1Q6ZQY3 521 aa13.5□□□□□ -0.25
STRC-207ENST00000460952 NOL8Q76FK4 1167 aaKnown RBP13.5□□□□□ -0.25
STRC-207ENST00000460952 FASTKD5Q7L8L6 764 aaKnown RBP13.5□□□□□ -0.25
STRC-207ENST00000460952 NUP133Q8WUM0 1156 aa13.5□□□□□ -0.25
STRC-207ENST00000460952 ZNF274Q96GC6 653 aaPredicted RBP13.5□□□□□ -0.25
STRC-207ENST00000460952 NUP88Q99567 741 aaPredicted RBP13.5□□□□□ -0.25
STRC-207ENST00000460952 MAD2L2Q9UI95 211 aa13.5□□□□□ -0.25
STRC-207ENST00000460952 LIMCH1Q9UPQ0 1083 aa13.5□□□□□ -0.25
STRC-207ENST00000460952 PALM3A6NDB9 673 aaPredicted RBP13.49□□□□□ -0.25
STRC-207ENST00000460952 GOLGA8AA7E2F4 631 aa13.49□□□□□ -0.25
STRC-207ENST00000460952 PARP1P09874 1014 aaKnown RBP13.49□□□□□ -0.25
STRC-207ENST00000460952 BMP3P12645 472 aa13.49□□□□□ -0.25
STRC-207ENST00000460952 METAP2P50579 478 aaKnown RBP eCLIP13.49□□□□□ -0.25
STRC-207ENST00000460952 NOGQ13253 232 aa13.49□□□□□ -0.25
STRC-207ENST00000460952 ME3Q16798 604 aa13.49□□□□□ -0.25
STRC-207ENST00000460952 RTN1Q16799 776 aa13.49□□□□□ -0.25
STRC-207ENST00000460952 GPATCH4Q5T3I0 446 aaKnown RBP13.49□□□□□ -0.25
STRC-207ENST00000460952 GPAT2Q6NUI2 795 aa13.49□□□□□ -0.25
STRC-207ENST00000460952 CTCFLQ8NI51 663 aaPredicted RBP13.49□□□□□ -0.25
STRC-207ENST00000460952 SNX21Q969T3 373 aa13.49□□□□□ -0.25
STRC-207ENST00000460952 RPAP3Q9H6T3 665 aaPredicted RBP13.49□□□□□ -0.25
STRC-207ENST00000460952 FAM217BQ9NTX9 383 aaPredicted RBP13.49□□□□□ -0.25
STRC-207ENST00000460952 SLC45A1Q9Y2W3 748 aa13.49□□□□□ -0.25
STRC-207ENST00000460952 WDR33Q9C0J8 1336 aaKnown RBP13.48□□□□□ -0.25
STRC-207ENST00000460952 BTBD19C9JJ37 291 aa13.48□□□□□ -0.25
STRC-207ENST00000460952 PFKFB2O60825 505 aa13.48□□□□□ -0.25
STRC-207ENST00000460952 HOXA7P31268 230 aaPredicted RBP13.48□□□□□ -0.25
STRC-207ENST00000460952 KIF5BP33176 963 aa13.48□□□□□ -0.25
STRC-207ENST00000460952 ST3GAL1Q11201 340 aa13.48□□□□□ -0.25
STRC-207ENST00000460952 KCTD1Q719H9 257 aa13.48□□□□□ -0.25
STRC-207ENST00000460952 ANKRD23Q86SG2 305 aa13.48□□□□□ -0.25
STRC-207ENST00000460952 CCDC144CPQ8IYA2 1237 aa13.48□□□□□ -0.25
STRC-207ENST00000460952 STAG2Q8N3U4 1231 aa13.48□□□□□ -0.25
STRC-207ENST00000460952 FANCBQ8NB91 859 aa13.48□□□□□ -0.25
STRC-207ENST00000460952 CHMP4CQ96CF2 233 aa13.48□□□□□ -0.25
STRC-207ENST00000460952 ZIC5Q96T25 663 aa13.48□□□□□ -0.25
STRC-207ENST00000460952 PTPN18Q99952 460 aa13.48□□□□□ -0.25
STRC-207ENST00000460952 SH2B1Q9NRF2 756 aaPredicted RBP13.48□□□□□ -0.25
STRC-207ENST00000460952 RBM28Q9NW13 759 aaKnown RBP13.48□□□□□ -0.25
STRC-207ENST00000460952 NAP1L2Q9ULW6 460 aaPredicted RBP13.48□□□□□ -0.25
STRC-207ENST00000460952 USP17L15C9J2P7 530 aa13.47□□□□□ -0.25
STRC-207ENST00000460952 USP17L13C9JLJ4 530 aa13.47□□□□□ -0.25
STRC-207ENST00000460952 USP17L11C9JVI0 530 aa13.47□□□□□ -0.25
STRC-207ENST00000460952 USP17L18D6R9N7 530 aa13.47□□□□□ -0.25
STRC-207ENST00000460952 USP17L22D6RA61 530 aa13.47□□□□□ -0.25
STRC-207ENST00000460952 USP17L17D6RBQ6 530 aa13.47□□□□□ -0.25
STRC-207ENST00000460952 USP17L19D6RCP7 530 aa13.47□□□□□ -0.25
STRC-207ENST00000460952 USP17L20D6RJB6 530 aa13.47□□□□□ -0.25
STRC-207ENST00000460952 IGF2BP3O00425 579 aaKnown RBP eCLIP13.47□□□□□ -0.25
STRC-207ENST00000460952 PLA2G6O60733 806 aa13.47□□□□□ -0.25
STRC-207ENST00000460952 AOC2O75106 756 aa13.47□□□□□ -0.25
STRC-207ENST00000460952 GOLGA8HP0CJ92 632 aa13.47□□□□□ -0.25
STRC-207ENST00000460952 CDC27P30260 824 aa13.47□□□□□ -0.25
STRC-207ENST00000460952 VEGFBP49765 207 aa13.47□□□□□ -0.25
STRC-207ENST00000460952 STAT2P52630 851 aa13.47□□□□□ -0.25
STRC-207ENST00000460952 USP17L24Q0WX57 530 aa13.47□□□□□ -0.25
STRC-207ENST00000460952 SCRN1Q12765 414 aa13.47□□□□□ -0.25
STRC-207ENST00000460952 SREBF2Q12772 1141 aa13.47□□□□□ -0.25
STRC-207ENST00000460952 GRM1Q13255 1194 aa13.47□□□□□ -0.25
STRC-207ENST00000460952 PPP2R5BQ15173 497 aa13.47□□□□□ -0.25
STRC-207ENST00000460952 SLC35G1Q2M3R5 365 aa13.47□□□□□ -0.25
STRC-207ENST00000460952 TTBK2Q6IQ55 1244 aa13.47□□□□□ -0.25
STRC-207ENST00000460952 BTNL9Q6UXG8 535 aa13.47□□□□□ -0.25
STRC-207ENST00000460952 CATSPERGQ6ZRH7 1159 aa13.47□□□□□ -0.25
STRC-207ENST00000460952 TMTC3Q6ZXV5 915 aa13.47□□□□□ -0.25
STRC-207ENST00000460952 GTF3C6Q969F1 213 aa13.47□□□□□ -0.25
STRC-207ENST00000460952 ZSCAN31Q96LW9 406 aaPredicted RBP13.47□□□□□ -0.25
STRC-207ENST00000460952 TANGO6Q9C0B7 1094 aa13.47□□□□□ -0.25
STRC-207ENST00000460952 SLKQ9H2G2 1235 aaPredicted RBP13.47□□□□□ -0.25
STRC-207ENST00000460952 ZCCHC17Q9NP64 241 aaKnown RBP13.47□□□□□ -0.25
STRC-207ENST00000460952 GPCPD1Q9NPB8 672 aa13.47□□□□□ -0.25
STRC-207ENST00000460952 TSHZ2Q9NRE2 1034 aa13.47□□□□□ -0.25
STRC-207ENST00000460952 FEM1BQ9UK73 627 aa13.47□□□□□ -0.25
STRC-207ENST00000460952 COL11A1P12107 1806 aaPredicted RBP13.47□□□□□ -0.25
STRC-207ENST00000460952 MYPNQ86TC9 1320 aa13.46□□□□□ -0.25
STRC-207ENST00000460952 CNTNAP5Q8WYK1 1306 aa13.46□□□□□ -0.25
STRC-207ENST00000460952 TMEM232C9JQI7 657 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms